Package: bats Version: 1.1.0+git104-g1c83a1b-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 50 Depends: neurodebian-popularity-contest Recommends: parallel Homepage: https://github.com/bats-core/bats-core Priority: optional Section: shells Filename: pool/main/b/bats/bats_1.1.0+git104-g1c83a1b-1~nd18.10+1_all.deb Size: 21088 SHA256: c32e5e44ee60cc9facc189ddbc84aca60550bf861fdfdd3eee4f8c871fb25b40 SHA1: 7c905d457e3536e156d8dacf51fbb7db9c3b3dc0 MD5sum: 1d2d421bbf71148ac22ebccdb7bab435 Description: bash automated testing system Bats is a TAP-compliant testing framework for Bash. It provides a simple way to verify that the UNIX programs you write behave as expected. Bats is most useful when testing software written in Bash, but you can use it to test any UNIX program. Package: btrbk Version: 0.29.1-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 362 Depends: neurodebian-popularity-contest, perl, btrfs-progs (>= 4.12) Recommends: openssh-client, mbuffer Suggests: openssl, python3 Homepage: https://digint.ch/btrbk/ Priority: optional Section: utils Filename: pool/main/b/btrbk/btrbk_0.29.1-1~nd18.10+1_all.deb Size: 97248 SHA256: fe16556bb0d7eadf8fd58fa1f34d971e08ad3c42b863695808ebede8f1cc369b SHA1: 28006217b09b789b68cac70f15b5f6693da9c026 MD5sum: e85ead8d1349a2146bb95249d931df85 Description: backup tool for btrfs subvolumes Backup tool for btrfs subvolumes, using a configuration file, allows creation of backups from multiple sources to multiple destinations, with ssh and flexible retention policy support (hourly, daily, weekly, monthly). Package: connectome-workbench Version: 1.4.2-1~nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 51843 Depends: neurodebian-popularity-contest, libc6 (>= 2.27), libftgl2 (>= 2.1.3~rc5), libgcc1 (>= 1:7), libgl1, libglu1-mesa | libglu1, libgomp1 (>= 4.9), libosmesa6 (>= 10.2~), libqt5core5a (>= 5.11.0~rc1), libqt5gui5 (>= 5.2.0), libqt5network5 (>= 5.0.2), libqt5opengl5 (>= 5.0.2), libqt5printsupport5 (>= 5.0.2), libqt5widgets5 (>= 5.11.0~rc1), libqt5xml5 (>= 5.1.0), libstdc++6 (>= 5.2), zlib1g (>= 1:1.2.3.4) Recommends: caret Suggests: ffmpeg Homepage: http://www.nitrc.org/projects/workbench/ Priority: optional Section: science Filename: pool/main/c/connectome-workbench/connectome-workbench_1.4.2-1~nd18.10+1_i386.deb Size: 22015624 SHA256: 0a42095fb489bc55f6d60139eaf9d92e48d5c29040dae9a63b2eeac5e0f5250e SHA1: 461f1f6b5d425034126584c364f13ebc9f90c64a MD5sum: a37c29e2a77c8f85a98079ebd598bc77 Description: brain visualization, analysis and discovery tool Connectome Workbench is a brain visualization, analysis and discovery tool for fMRI and dMRI brain imaging data, including functional and structural connectivity data generated by the Human Connectome Project. . Package includes wb_command, a command-line program for performing a variety of analytical tasks for volume, surface, and CIFTI grayordinates data. Package: connectome-workbench-dbg Source: connectome-workbench Version: 1.4.2-1~nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 260580 Depends: neurodebian-popularity-contest, connectome-workbench (= 1.4.2-1~nd18.10+1) Homepage: http://www.nitrc.org/projects/workbench/ Priority: optional Section: debug Filename: pool/main/c/connectome-workbench/connectome-workbench-dbg_1.4.2-1~nd18.10+1_i386.deb Size: 258860308 SHA256: 907b1638ba0978ce181a35154742859db9bcccdc668874669ce76b91dfc75985 SHA1: 6e6596e720de5826b772e7936b8562e82e2b5872 MD5sum: 3139534887e51cfde5c65cc39769369b Description: brain visualization, analysis and discovery tool -- debug symbols Connectome Workbench is a brain visualization, analysis and discovery tool for fMRI and dMRI brain imaging data, including functional and structural connectivity data generated by the Human Connectome Project. . Package includes wb_command, a command-line program for performing a variety of analytical tasks for volume, surface, and CIFTI grayordinates data. . This package contains debug symbols for the binaries. Build-Ids: a993c61c0ddedc602e91918e31ec7578e0f5b4a1 d9a0870f1120bdfed3e380462f263139b90b44c5 Package: convert3d Version: 0.0.20190204-1~nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 60955 Depends: neurodebian-popularity-contest, libc6 (>= 2.27), libgcc1 (>= 1:4.0), libgdcm2.8, libinsighttoolkit4.12 (>= 4.12.0-dfsg1-2~), libqt5core5a (>= 5.11.0~rc1), libqt5gui5 (>= 5.8.0), libqt5widgets5 (>= 5.7.0), libstdc++6 (>= 5.2) Homepage: https://sourceforge.net/projects/c3d/ Priority: optional Section: science Filename: pool/main/c/convert3d/convert3d_0.0.20190204-1~nd18.10+1_i386.deb Size: 9701188 SHA256: 9bb977e399290575be752f99f8e52dafcd90fa456cfdc0551da1528c61ce338b SHA1: f6731ec9ecb992e2cea406bd8409cf46a81de681 MD5sum: 9b4204f4e1927867b1adc7cd8cea8cfe Description: tool(s) for converting 3D images between common file formats C3D is a (command-line and GUI) tool for converting 3D images between common file formats. The tool also includes a growing list of commands for image manipulation, such as thresholding and resampling. Package: copyq Version: 3.6.1-1~nd1~nd18.04+1+nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 5018 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.2), libqt5core5a (>= 5.11.0~rc1), libqt5gui5 (>= 5.8.0), libqt5network5 (>= 5.0.2), libqt5script5 (>= 5.6.0~beta), libqt5svg5 (>= 5.6.0~beta), libqt5widgets5 (>= 5.11.0~rc1), libqt5x11extras5 (>= 5.6.0), libstdc++6 (>= 4.8), libx11-6, libxtst6 Recommends: copyq-plugins (= 3.6.1-1~nd1~nd18.04+1+nd18.10+1) Suggests: copyq-doc Homepage: https://hluk.github.io/CopyQ/ Priority: optional Section: utils Filename: pool/main/c/copyq/copyq_3.6.1-1~nd1~nd18.04+1+nd18.10+1_i386.deb Size: 1396508 SHA256: ad80507e03ec13f2b0c6aa49862666659914a661884cf9fb448ea6c8f05567a4 SHA1: 062fe46a2567e041dc192d8e7b4a700a430eb49d MD5sum: 606c3352cf5aa4e4003ea0daef2c082e Description: Advanced clipboard manager with editing and scripting features CopyQ monitors system clipboard and saves its content in customized tabs. Saved clipboard can be later copied and pasted directly into any application. . Items can be: * edited with internal editor or with preferred text editor, * moved to other tabs, * drag'n'dropped to applications, * marked with tag or a note, * passed to or changed by custom commands, * or simply removed. . Features: * Support for Linux, Windows and OS X 10.9+ * Store text, HTML, images or any other custom formats * Quickly browse and filter items in clipboard history * Sort, create, edit, remove, copy/paste, drag'n'drop items in tabs * Add notes or tags to items * System-wide shortcuts with customizable commands * Paste items with shortcut or from tray or main window * Fully customizable appearance * Advanced command-line interface and scripting * Ignore clipboard copied from some windows or containing some text * Support for simple Vim-like editor and shortcuts * Many more features Package: copyq-plugins Source: copyq Version: 3.6.1-1~nd1~nd18.04+1+nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 3103 Depends: neurodebian-popularity-contest, copyq (= 3.6.1-1~nd1~nd18.04+1+nd18.10+1), libc6 (>= 2.4), libgcc1 (>= 1:3.0), libqt5core5a (>= 5.11.0~rc1), libqt5gui5 (>= 5.2.0), libqt5widgets5 (>= 5.11.0~rc1), libstdc++6 (>= 4.8) Homepage: https://hluk.github.io/CopyQ/ Priority: optional Section: utils Filename: pool/main/c/copyq/copyq-plugins_3.6.1-1~nd1~nd18.04+1+nd18.10+1_i386.deb Size: 658568 SHA256: e0f28115ca59ba869c79ec47907a23c6d083dfcd49aa72cd07811831e180a41e SHA1: ca0ff15ee55d8559a7119568619ae33ee214d0d1 MD5sum: 8e86be24aee9af1e1a1b94b7ae4c890e Description: Plugins for CopyQ CopyQ monitors system clipboard and saves its content in customized tabs. Saved clipboard can be later copied and pasted directly into any application. . This package contains plugins that add various item types support and features to CopyQ, including: * Text with Highlighting * Images * Web Pages * Various Data * Notes * Encryption * FakeVim Editor * Synchronize Items to Disk * Item Tags * Pinned Items Package: datalad Version: 0.17.5-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 224 Depends: neurodebian-popularity-contest, python3-datalad (= 0.17.5-1~nd+1), python3-argcomplete (>= 1.12.3), python3:any Suggests: datalad-container, datalad-crawler, datalad-neuroimaging Homepage: https://datalad.org Priority: optional Section: science Filename: pool/main/d/datalad/datalad_0.17.5-1~nd+1_all.deb Size: 187092 SHA256: dcfab5ab31ab85c685b4439648c3095efb236b34c92eb2f870fc1376dd0dbab1 SHA1: e8a088bc96e73f10444588eede93689410943c07 MD5sum: a4020bc221d05979fe1738d432660717 Description: data files management and distribution platform DataLad is a data management and distribution platform providing access to a wide range of data resources already available online. Using git-annex as its backend for data logistics it provides following facilities built-in or available through additional extensions . - command line and Python interfaces for manipulation of collections of datasets (install, uninstall, update, publish, save, etc.) and separate files/directories (add, get) - extract, aggregate, and search through various sources of metadata (xmp, EXIF, etc; install datalad-neuroimaging for DICOM, BIDS, NIfTI support) - crawl web sites to automatically prepare and update git-annex repositories with content from online websites, S3, etc (install datalad-crawler) Package: datalad-container Version: 0.5.0-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 89 Depends: neurodebian-popularity-contest, datalad (>= 0.11.5~), python3-requests (>= 1.2), python3-chardet (>= 3.0.4), python3-datalad, python3:any Recommends: singularity-container Suggests: docker.io Homepage: http://datalad-container.rtfd.org Priority: optional Section: science Filename: pool/main/d/datalad-container/datalad-container_0.5.0-1~nd18.10+1_all.deb Size: 19420 SHA256: 8c96c5817d407fcac8361f8e8ea9fcc8e4f2997bd73cc0432278ed0f13b0fa48 SHA1: 32c5ed7d27063b69f381830b07adb2881d9275c7 MD5sum: 80fa1e55fdecc5439c19155770e59c69 Description: DataLad extension for working with containerized environments This extension enhances DataLad (http://datalad.org) for working with computational containers. Package: dcm2niix Version: 1:1.0.20190902-1~nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 881 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2), libyaml-cpp0.5v5 Homepage: https://github.com/rordenlab/dcm2niix Priority: optional Section: science Filename: pool/main/d/dcm2niix/dcm2niix_1.0.20190902-1~nd18.10+1_i386.deb Size: 211732 SHA256: 381961d8e1009f7049e55a504daf61a8bfba9aeaa951a66accc1ec6ea8b7bce8 SHA1: 235239fd7f870e7df6aed4787d1af15528d93340 MD5sum: b68d77795f8b2c87cd8c5f18ed127254 Description: converts DICOM and PAR/REC files into the NIfTI format This is the successor of the well-known dcm2nii program. it aims to provide same functionality albeit with much faster operation. This is a new tool that is not yet well tested, and does not handle ancient proprietary formats. Use with care. Package: exempi Version: 2.4.1-1~nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 42 Depends: neurodebian-popularity-contest, libexempi3 (= 2.4.1-1~nd18.10+1), libc6 (>= 2.4), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2) Multi-Arch: foreign Homepage: https://libopenraw.freedesktop.org/wiki/Exempi Priority: optional Section: graphics Filename: pool/main/e/exempi/exempi_2.4.1-1~nd18.10+1_i386.deb Size: 17520 SHA256: 3de15200abb9858d631035159d1d87b11450137ac31ee8d1f299459aa6afb764 SHA1: 1ae32011a1b5b7e0e78c0c7df7e29c992c5099fe MD5sum: a23c3db005c33166c111186ae6e8b3f6 Description: command line tool to manipulate XMP metadata Exempi is a library to parse XMP metadata as defined by the specification. . XMP (Extensible Metadata Platform) facilitates embedding metadata in files using a subset of RDF. Most notably XMP supports embedding metadata in PDF and many image formats, though it is designed to support nearly any file type. . This package provides a command line tool to manipulate XMP metadata. Package: fsleyes Version: 0.15.2-1~nd17.10+1+nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 242018 Depends: neurodebian-popularity-contest, python-fsl, python-fsleyes-props, python-fsleyes-widgets, python-wxgtk3.0, python-six (>= 1.0~), python-jinja2, python-scipy, python-matplotlib, python-numpy, python-opengl (>= 3.1~), python-indexed-gzip, python-nibabel, python-pil, python-pyparsing, python:any (<< 2.8), python:any (>= 2.7~) Priority: optional Section: science Filename: pool/main/f/fsleyes/fsleyes_0.15.2-1~nd17.10+1+nd18.04+1+nd18.10+1_all.deb Size: 28080288 SHA256: 24ac6849452db34713acc9a501460eb415f8fff637e83eecb55d972d4f7b9342 SHA1: eb753256ac0976d30b96149719f63a393c170e8b MD5sum: 7f3f92a6ec1d50a538ea29e1ff65240b Description: FSL image viewer Feature-rich viewer for volumetric (medical) images. Package: git Version: 1:2.24.0-1~nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 45469 Depends: neurodebian-popularity-contest, libc6 (>= 2.28), libcurl3-gnutls (>= 7.56.1), libexpat1 (>= 2.0.1), libpcre2-8-0 (>= 10.31), zlib1g (>= 1:1.2.0), perl, liberror-perl, git-man (>> 1:2.24.0), git-man (<< 1:2.24.0-.) Recommends: ca-certificates, patch, less, ssh-client Suggests: gettext-base, git-daemon-run | git-daemon-sysvinit, git-doc, git-el, git-email, git-gui, gitk, gitweb, git-cvs, git-mediawiki, git-svn Breaks: bash-completion (<< 1:1.90-1), cogito (<= 0.18.2+), dgit (<< 5.1~), git-buildpackage (<< 0.6.5), git-core (<< 1:1.7.0.4-1.), gitosis (<< 0.2+20090917-7), gitpkg (<< 0.15), gitweb (<< 1:1.7.4~rc1), guilt (<< 0.33), openssh-client (<< 1:6.8), stgit (<< 0.15), stgit-contrib (<< 0.15) Replaces: git-core (<< 1:1.7.0.4-1.), gitweb (<< 1:1.7.4~rc1) Provides: git-completion, git-core Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: vcs Filename: pool/main/g/git/git_2.24.0-1~nd18.10+1_i386.deb Size: 6532348 SHA256: 7db60e0ee58dc92ccb259462abd542d14783e29e78f4dad714e7df47dd4a1914 SHA1: 3e9436512254ede77bafa231c7520cc5570d25ce MD5sum: 0acd3903f9eb2c87e6576566871fa285 Description: fast, scalable, distributed revision control system Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . This package provides the git main components with minimal dependencies. Additional functionality, e.g. a graphical user interface and revision tree visualizer, tools for interoperating with other VCS's, or a web interface, is provided as separate git* packages. Package: git-all Source: git Version: 1:2.24.0-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 831 Depends: neurodebian-popularity-contest, git (>> 1:2.24.0), git (<< 1:2.24.0-.), git-doc, git-el, git-cvs, git-mediawiki, git-svn, git-email, git-gui, gitk, gitweb Recommends: git-daemon-run | git-daemon-sysvinit Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: vcs Filename: pool/main/g/git/git-all_2.24.0-1~nd18.10+1_all.deb Size: 834252 SHA256: 74c673954703105ee8595839687c946ead6abffa75ca3edfbdf5ef647c770a44 SHA1: 47acb803016465c40c850ff4cb2c5523a9557797 MD5sum: 5b71a512d0226444d1abf12b8e320402 Description: fast, scalable, distributed revision control system (all subpackages) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . This is a dummy package which brings in all subpackages. Package: git-annex-remote-rclone Version: 0.6-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 24 Depends: neurodebian-popularity-contest, git-annex | git-annex-standalone, rclone Homepage: https://github.com/DanielDent/git-annex-remote-rclone Priority: optional Section: utils Filename: pool/main/g/git-annex-remote-rclone/git-annex-remote-rclone_0.6-1~nd18.10+1_all.deb Size: 8188 SHA256: d9d9eb542ad8ecd89bb946aa4d1a7678586b5676185fd218b043410c829aed0e SHA1: 23f16079f06c03b62eb2d2886e2d53159a0ecb9c MD5sum: 4ca765179c6a8f1f6cddc691655f363a Description: rclone-based git annex special remote This is a wrapper around rclone to make any destination supported by rclone usable with git-annex. . Cloud storage providers supported by rclone currently include: * Google Drive * Amazon S3 * Openstack Swift / Rackspace cloud files / Memset Memstore * Dropbox * Google Cloud Storage * Microsoft One Drive * Hubic * Backblaze B2 * Yandex Disk . Note: although Amazon Cloud Drive support is implemented, it is broken ATM see https://github.com/DanielDent/git-annex-remote-rclone/issues/22 . Package: git-annex-standalone Source: git-annex Version: 10.20241031-1~ndall+1 Architecture: i386 Maintainer: Richard Hartmann Installed-Size: 236968 Depends: git, netbase, openssh-client Recommends: lsof, gnupg, bind9-host, yt-dlp, git-remote-gcrypt (>= 0.20130908-6), nocache, aria2 Suggests: xdot, bup, adb, tor, magic-wormhole, tahoe-lafs, libnss-mdns, uftp Conflicts: git-annex Breaks: datalad (<= 0.12.3~) Provides: git-annex Homepage: http://git-annex.branchable.com/ Priority: optional Section: utils Filename: pool/main/g/git-annex/git-annex-standalone_10.20241031-1~ndall+1_i386.deb Size: 68790604 SHA256: 54a538b686e2e3c42f6cf7260adc0ffe9710f3c6acc07a3b0832df703dba5a6b SHA1: be36d7de781610ad2928fe4ce19fa9ff92631f78 MD5sum: 97eb9b52c155f9c314da9711f48b2ed7 Description: manage files with git, without checking their contents into git -- standalone build git-annex allows managing large files with git, without storing the file contents in git. It can sync, backup, and archive your data, offline and online. Checksums and encryption keep your data safe and secure. Bring the power and distributed nature of git to bear on your large files with git-annex. . It can store large files in many places, from local hard drives, to a large number of cloud storage services, including S3, WebDAV, and rsync, with dozens of cloud storage providers usable via plugins. Files can be stored encrypted with gpg, so that the cloud storage provider cannot see your data. git-annex keeps track of where each file is stored, so it knows how many copies are available, and has many facilities to ensure your data is preserved. . git-annex can also be used to keep a folder in sync between computers, noticing when files are changed, and automatically committing them to git and transferring them to other computers. The git-annex webapp makes it easy to set up and use git-annex this way. . This package provides a standalone bundle build of git-annex, which should be installable on any more or less recent Debian or Ubuntu release. Package: git-cvs Source: git Version: 1:2.24.0-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1212 Depends: neurodebian-popularity-contest, git (>> 1:2.24.0), git (<< 1:2.24.0-.), cvsps, libdbd-sqlite3-perl Suggests: git-doc, cvs Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: vcs Filename: pool/main/g/git/git-cvs_2.24.0-1~nd18.10+1_all.deb Size: 897216 SHA256: 81ee99544e11f53d33e5a8fedd7ff06408561ffcfc9318b496d19b8cf20e8737 SHA1: 7d69a9392663554e2ad0b19a35d16b604cd3b677 MD5sum: 9a2dc23e55ec72e0e3ef6f84ca1af43e Description: fast, scalable, distributed revision control system (cvs interoperability) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . This package provides the git cvsimport, cvsexportcommit, and cvsserver tools, which allow Git to read from and write to CVS repositories and offer access over CVS protocol to Git repositories. . The git cvsimport tool can incrementally import from a repository that is being actively developed and only requires remote access over CVS protocol. Unfortunately, in many situations the import leads to incorrect results. For reliable, one-shot imports, cvs2git from the cvs2svn package or parsecvs may be a better fit. Package: git-daemon-run Source: git Version: 1:2.24.0-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 843 Depends: neurodebian-popularity-contest, git (>> 1:2.24.0), git (<< 1:2.24.0-.), runit, adduser Conflicts: git-daemon-sysvinit Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: vcs Filename: pool/main/g/git/git-daemon-run_2.24.0-1~nd18.10+1_all.deb Size: 835884 SHA256: ac27b962bad98e8399e4fdea93717cd11e912b2412afc24baa2d23c955ceaf4c SHA1: 485778f728fd3e8996bfd69de61f18a16c7a6765 MD5sum: 0b69d167fda587de8de4cb547b3d1bcf Description: fast, scalable, distributed revision control system (git-daemon service) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . git-daemon, as provided by the git package, is a simple server for git repositories, ideally suited for read-only updates, i.e. pulling from git repositories through the network. This package provides a runit service for running git-daemon permanently. This configuration is simpler and more reliable than git-daemon-sysvinit, at a cost of being less familiar for administrators accustomed to sysvinit. Package: git-daemon-sysvinit Source: git Version: 1:2.24.0-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 846 Depends: neurodebian-popularity-contest, git (>> 1:2.24.0), git (<< 1:2.24.0-.), adduser, lsb-base (>= 3.0-6) Conflicts: git-daemon-run Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: vcs Filename: pool/main/g/git/git-daemon-sysvinit_2.24.0-1~nd18.10+1_all.deb Size: 837016 SHA256: 1a5d677a3adbdae1d1a963ccde1a52c01a503ed838a0aa4246b2c96abe630d4a SHA1: f0f7e4c4d8afafc13dee3d373a79954cc6fe9072 MD5sum: 6107865971c1221ce7ed7818a17b6b9e Description: fast, scalable, distributed revision control system (git-daemon service) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . git-daemon, as provided by the git package, is a simple server for git repositories, ideally suited for read-only updates, i.e. pulling from git repositories through the network. This package provides a sysvinit service for running git-daemon permanently. Unlike git-daemon-run, this package provides the usual sysvinit service management commands ("service git-daemon start/stop") for git-daemon. Package: git-doc Source: git Version: 1:2.24.0-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 11642 Depends: neurodebian-popularity-contest Suggests: git, git-cvs, git-svn, git-email, gitk, gitweb Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: doc Filename: pool/main/g/git/git-doc_2.24.0-1~nd18.10+1_all.deb Size: 1836948 SHA256: 89b21ea49bb9f84620e8706ef3d2dac6de5914f32f4acd6cb8e11d04626c1402 SHA1: 9da365f196c264ad28f0bdedfdf7a15600d3d006 MD5sum: a8e15c8d259800e7c9931934844b581a Description: fast, scalable, distributed revision control system (documentation) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . This package provides the documentation. Package: git-el Source: git Version: 1:2.24.0-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 854 Depends: neurodebian-popularity-contest, git (>= 1:1.7.4.1-2~), emacs | emacsen Recommends: elpa-magit Breaks: git (<< 1:1.7.4.1-2~) Replaces: git (<< 1:1.7.4.1-2~) Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: vcs Filename: pool/main/g/git/git-el_2.24.0-1~nd18.10+1_all.deb Size: 836632 SHA256: eafe777ee11972f73f5f6052ee2e6658429f92fc9bca67aa4c55af735eaddea8 SHA1: d3d35e0fa9009036860a3ab3673b4b4eb825b3c6 MD5sum: e1832066ac821f452125142bda89937d Description: fast, scalable, distributed revision control system (emacs support) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . This transitional package provides two modules that previously could be used for integration with Emacs: git.el and git-blame.el. Now the modules print an error message with instructions that users can use to migrate to Emacs's VC-mode backend for Git or Magit. Package: git-email Source: git Version: 1:2.24.0-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 900 Depends: neurodebian-popularity-contest, git (>> 1:2.24.0), git (<< 1:2.24.0-.) Recommends: libemail-valid-perl, libmailtools-perl, perl (>> 5.21.5) | libnet-smtp-ssl-perl, libauthen-sasl-perl, libio-socket-ssl-perl (>= 1.951) Suggests: git-doc Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: vcs Filename: pool/main/g/git/git-email_2.24.0-1~nd18.10+1_all.deb Size: 859540 SHA256: b34f7b81eac647f2012e6d250362d29ab777d83bcd29bf5b8bb5ee1afa18a82f SHA1: a17c1eb4266908477faad8c3b645aedb10ce53db MD5sum: b987373f3b5de3ac6e54747dc5e156c5 Description: fast, scalable, distributed revision control system (email add-on) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . This package provides the git-send-email program for sending series of patch emails. Package: git-gui Source: git Version: 1:2.24.0-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2313 Depends: neurodebian-popularity-contest, git (>> 1:2.24.0), git (<< 1:2.24.0-.), tk Recommends: gitk Suggests: git-doc, aspell, meld Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: vcs Filename: pool/main/g/git/git-gui_2.24.0-1~nd18.10+1_all.deb Size: 1044636 SHA256: 7de59e2d241134243b80b886f3caee53a6519bbc19b06928e8628f7fc00cb3f5 SHA1: 3967e3fb06339b587541cb8a7ed09f9fd31a1d72 MD5sum: 038631cb55655fd00aac4b8a13b81319 Description: fast, scalable, distributed revision control system (GUI) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . This package provides the git graphical user interface. . If aspell is installed, it can check the spelling of commit messages as the user types. . If meld is installed, it can be used for displaying diffs and for interactive merge conflict resolution. Package: git-man Source: git Version: 1:2.24.0-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1748 Depends: neurodebian-popularity-contest Breaks: git (<< 1:1.7.4~rc1) Replaces: git (<< 1:1.7.4~rc1), git-core (<< 1:1.7.0.4-1.) Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: doc Filename: pool/main/g/git/git-man_2.24.0-1~nd18.10+1_all.deb Size: 1695032 SHA256: 29f372cd0f65abcd71fd334c7ec0752675fff11452febc263e3612f05f888211 SHA1: fe3012687e66dff7fafbff26616a6897b87b12e0 MD5sum: ec82c7e4ba27b53668b68cb6327c09f2 Description: fast, scalable, distributed revision control system (manual pages) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . This package provides reference documentation for use by the 'man' utility and the 'git help' command. Package: git-mediawiki Source: git Version: 1:2.24.0-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 890 Depends: neurodebian-popularity-contest, git (>> 1:2.24.0), git (<< 1:2.24.0-.), libmediawiki-api-perl (>= 0.39), liblwp-protocol-https-perl, libdatetime-format-iso8601-perl Suggests: mediawiki Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: vcs Filename: pool/main/g/git/git-mediawiki_2.24.0-1~nd18.10+1_all.deb Size: 850236 SHA256: 0a4d23405d9b600a127c08fd724012e8ac4936c03c1e2e1597499fc6c7818a58 SHA1: a0eeb850c41e1341746cea78e83e8690c92b3308 MD5sum: 2dfe9bd1a06c599a4667bb13526c18ed Description: fast, scalable, distributed revision control system (MediaWiki remote helper) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . This package provides the mediawiki remote helper, which allows Git to read from and write to a wiki such as Wikipedia as though it were a remote Git repository, and a 'git mw' command that can show a preview of how wiki markup will be rendered before pushing. Package: git-svn Source: git Version: 1:2.24.0-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1077 Depends: neurodebian-popularity-contest, git (>> 1:2.24.0), git (<< 1:2.24.0-.), libsvn-perl, libyaml-perl, libterm-readkey-perl Suggests: git-doc, subversion Breaks: git (<< 1:1.8.3~rc1-1.) Replaces: git (<< 1:1.8.3~rc1-1.) Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: vcs Filename: pool/main/g/git/git-svn_2.24.0-1~nd18.10+1_all.deb Size: 909412 SHA256: bd3a32a1f9ce9fdb8944fa2b53391bf0d5ed31c38a24d26a1f2f9cf0f42b74b6 SHA1: d1c5add42667bcffcbe133ec6f5ea54e52ac9e3e MD5sum: 2a2bc98c097072ca1b091d2b49f0ff96 Description: fast, scalable, distributed revision control system (svn interoperability) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . This package provides tools for interoperating with Subversion repositories, and importing SVN development history. Package: gitk Source: git Version: 1:2.24.0-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1612 Depends: neurodebian-popularity-contest, git (>> 1:2.24.0), git (<< 1:2.24.0-.), tk Suggests: git-doc Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: vcs Filename: pool/main/g/git/gitk_2.24.0-1~nd18.10+1_all.deb Size: 969472 SHA256: 670290bd4b3991665f254c86c1d2c488b1a722cf6871937a18f6e353ebb6cd85 SHA1: 1f51097d49da7f411e47a8b8931993661da344ed MD5sum: eaf8ce6dd9754f7b5a81a86a6e10e845 Description: fast, scalable, distributed revision control system (revision tree visualizer) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . This package provides the gitk program, a tcl/tk revision tree visualizer. Package: gitweb Source: git Version: 1:2.24.0-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 853 Depends: neurodebian-popularity-contest, git (>> 1:2.24.0), git (<< 1:2.24.0-.), perl, libcgi-pm-perl Recommends: apache2 (>= 2.4.6-4~) | lynx | httpd, libhttp-date-perl | libtime-parsedate-perl Suggests: httpd-cgi | libcgi-fast-perl, git-doc Breaks: apache2.2-common (<< 2.3~) Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: vcs Filename: pool/main/g/git/gitweb_2.24.0-1~nd18.10+1_all.deb Size: 838524 SHA256: de427aca8abe5857f600ee021a00ddc350218a1a111c5027b2af873f8f6084dd SHA1: 023cf719f17ad132837f555066c774c1366ec528 MD5sum: dc870ae16343986904b3f2aa99694ccd Description: fast, scalable, distributed revision control system (web interface) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . This package configures a web interface for browsing git repositories. . If apache2 is installed, the web interface is automatically made available at http://localhost/gitweb. Other servers that support CGI or mod_perl are supported through manual configuration. . If libcgi-fast-perl is installed, gitweb can also be run over FastCGI (and served by nginx, for example). Package: golang-github-ncw-rclone-dev Source: rclone Version: 1.41-1~ndall0 Architecture: all Maintainer: Debian Go Packaging Team Installed-Size: 2492 Depends: golang-bazil-fuse-dev, golang-github-aws-aws-sdk-go-dev, golang-github-mreiferson-go-httpclient-dev, golang-github-ncw-go-acd-dev, golang-github-ncw-swift-dev, golang-github-pkg-errors-dev, golang-github-pkg-sftp-dev, golang-github-rfjakob-eme-dev, golang-github-skratchdot-open-golang-dev, golang-github-spf13-cobra-dev, golang-github-spf13-pflag-dev, golang-github-stacktic-dropbox-dev, golang-github-stretchr-testify-dev, golang-github-tsenart-tb-dev, golang-github-unknwon-goconfig-dev, golang-github-vividcortex-ewma-dev, golang-golang-x-crypto-dev, golang-golang-x-net-dev, golang-golang-x-oauth2-google-dev, golang-golang-x-sys-dev, golang-golang-x-text-dev, golang-google-api-dev Homepage: https://github.com/ncw/rclone Priority: optional Section: devel Filename: pool/main/r/rclone/golang-github-ncw-rclone-dev_1.41-1~ndall0_all.deb Size: 399416 SHA256: 528b53f3312375d31d5cebb95472a57272cf242e14a92cfdf99c45be2ff5511d SHA1: 75f8871fd668e815023267a857b37ad60b9d1c2f MD5sum: a87865eafe10185420838e2e4ffd7b55 Description: go source code of rclone Rclone is a program to sync files and directories between the local file system and a variety of commercial cloud storage providers. . This package contains rclone's source code. Package: heudiconv Version: 0.6.0-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 937 Depends: neurodebian-popularity-contest, dcm2niix, python, python-dcmstack, python-dicom, python-filelock, python-nibabel, python-pathlib, python-numpy, python-nipype Recommends: python-pytest, python-datalad Homepage: https://github.com/nipy/heudiconv Priority: optional Section: science Filename: pool/main/h/heudiconv/heudiconv_0.6.0-1~nd18.10+1_all.deb Size: 253756 SHA256: 0a34162480dc1d370b556e6449fc12b1de1a188e7be1a8e15dd47f75067c294a SHA1: b6143515374b54879034381e37f5b757a416e1ff MD5sum: aef16171fdaac7dd90196e0e5000cfee Description: DICOM converter with support for structure heuristics This is a flexible dicom converter for organizing brain imaging data into structured directory layouts. It allows for flexible directory layouts and naming schemes through customizable heuristics implementations. It only converts the necessary dicoms, not everything in a directory. It tracks the provenance of the conversion from dicom to nifti in w3c prov format. Package: libexempi-dev Source: exempi Version: 2.4.1-1~nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 3535 Depends: neurodebian-popularity-contest, libexempi3 (= 2.4.1-1~nd18.10+1) Multi-Arch: same Homepage: https://libopenraw.freedesktop.org/wiki/Exempi Priority: optional Section: libdevel Filename: pool/main/e/exempi/libexempi-dev_2.4.1-1~nd18.10+1_i386.deb Size: 742800 SHA256: 3c582e5d6ffd5fda7015fd2075e3fb6523917ab75397970ce2aa13883a88b20f SHA1: d2991743a3cb4725c27858306b26dba3a3421b1c MD5sum: 278e78abbde7d010ec7138568b0cac4e Description: library to parse XMP metadata (Development files) Exempi is a library to parse XMP metadata as defined by the specification. . XMP (Extensible Metadata Platform) facilitates embedding metadata in files using a subset of RDF. Most notably XMP supports embedding metadata in PDF and many image formats, though it is designed to support nearly any file type. . This package provides development files for using exempi. Package: libexempi3 Source: exempi Version: 2.4.1-1~nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1713 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libexpat1 (>= 2.0.1), libgcc1 (>= 1:7), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4) Multi-Arch: same Homepage: https://libopenraw.freedesktop.org/wiki/Exempi Priority: optional Section: libs Filename: pool/main/e/exempi/libexempi3_2.4.1-1~nd18.10+1_i386.deb Size: 592360 SHA256: 2e013b9e8d0fcf4dded451f15b77ce42338a97e62771aacef3a6c31993260be4 SHA1: 44ac815f354c92fd21e7ef415d3a5405da5acd9e MD5sum: a8f2b68a10aebc1a22915ddddfaa01f6 Description: library to parse XMP metadata (Library) Exempi is a library to parse XMP metadata as defined by the specification. . XMP (Extensible Metadata Platform) facilitates embedding metadata in files using a subset of RDF. Most notably XMP supports embedding metadata in PDF and many image formats, though it is designed to support nearly any file type. Package: libglm-dev Source: glm Version: 0.9.9.6-1+nd1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2159 Depends: neurodebian-popularity-contest Multi-Arch: foreign Homepage: https://glm.g-truc.net/ Priority: optional Section: libdevel Filename: pool/main/g/glm/libglm-dev_0.9.9.6-1+nd1~nd18.10+1_all.deb Size: 175980 SHA256: 2cf69384b8a014347b14908998ffd6c14e0b3fccbcd4da2dff4efe9b88332026 SHA1: 9a287b837c877a2fc45c8e839f17f5c0ca4c8cab MD5sum: 1c74ae8fe85a9516b97245589da9673f Description: C++ library for OpenGL GLSL type-based mathematics OpenGL Mathematics (GLM) is a header only C++ mathematics library for graphics software based on the OpenGL Shading Language (GLSL) specification. . GLM provides classes and functions designed and implemented with the same naming conventions and functionalities as GLSL, so that when a programmer knows GLSL, he knows GLM as well, which makes it really easy to use. . This project isn't limited to GLSL features. An extension system, based on the GLSL extension conventions, provides extended capabilities: matrix transformations, quaternions, half-based types, random numbers, et cetera. . This library works perfectly together with OpenGL but it also ensures interoperability with other third party libraries and SDKs. It is a good candidate for software rendering (such as raytracing, rasterisation), image processing, physic simulations and any context that requires a simple and convenient mathematics library. Package: libglm-doc Source: glm Version: 0.9.9.6-1+nd1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 12702 Depends: neurodebian-popularity-contest Recommends: libjs-jquery Multi-Arch: foreign Homepage: https://glm.g-truc.net/ Priority: optional Section: doc Filename: pool/main/g/glm/libglm-doc_0.9.9.6-1+nd1~nd18.10+1_all.deb Size: 499036 SHA256: 7e7d7d5d8d346859fde1bc73e59bf3abae098f69cb8614af4658736d6fa9a938 SHA1: 64b0e6c8bae97ac19aa96030d6588e5383a35b9a MD5sum: fdc515c638f33a6c5e2140c735b93b79 Description: documentation for the OpenGL Mathematics (GLM) library OpenGL Mathematics (GLM) is a header only C++ mathematics library for graphics software based on the OpenGL Shading Language (GLSL) specification. . This package contains the OpenGL Mathematics manual in HTML and PDF formats. Package: libqt5pas-dev Source: libqtpas Version: 2.6~beta-6~nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1371 Depends: neurodebian-popularity-contest, libqt5pas1 (= 2.6~beta-6~nd18.10+1) Suggests: fpc Multi-Arch: same Homepage: http://users.telenet.be/Jan.Van.hijfte/qtforfpc/fpcqt4.html Priority: optional Section: libdevel Filename: pool/main/libq/libqtpas/libqt5pas-dev_2.6~beta-6~nd18.10+1_i386.deb Size: 142392 SHA256: 875c10b8d43dfbadae80b5e4db3a0bb3f4429224d214d609158c44308cab89f4 SHA1: 538c3a75ea426d0fba3c886b4ffbdabd066910b8 MD5sum: f51893fc3da44dca6913d3758baee2bb Description: Development files for Qt5Pas Provides interface for Pascal applications to the Qt5 C++ libraries. This binding does not cover the whole Qt5 framework, it just contains all classes needed to use Qt as a widgetset. . This package contains files needed to develop Qt5 based applications with Pascal. Package: libqt5pas1 Source: libqtpas Version: 2.6~beta-6~nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 3009 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:3.0), libqt5core5a (>= 5.11.0~rc1), libqt5gui5 (>= 5.8.0), libqt5network5 (>= 5.0.2), libqt5printsupport5 (>= 5.3.0), libqt5widgets5 (>= 5.3.0), libqt5x11extras5 (>= 5.6.0), libstdc++6 (>= 5) Multi-Arch: same Homepage: http://users.telenet.be/Jan.Van.hijfte/qtforfpc/fpcqt4.html Priority: optional Section: libs Filename: pool/main/libq/libqtpas/libqt5pas1_2.6~beta-6~nd18.10+1_i386.deb Size: 535996 SHA256: d0e2542a42e37ed67eb902c825c70c0aa4fac9ba1078beb134cf05002fab24cb SHA1: 8e8a30fb69fb3f615937dcbe28d5c49d30e97612 MD5sum: c04c4433373d4a8c016a6aafc40527df Description: Qt5 interface bindings for Pascal Provides interface for Pascal applications to the Qt5 C++ libraries. This binding does not cover the whole Qt5 framework, it just contains all classes needed to use Qt as a widgetset. Package: mrtrix Version: 0.2.13-1~nd18.04+1+nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 9534 Depends: neurodebian-popularity-contest, libatkmm-1.6-1v5 (>= 2.24.0), libc6 (>= 2.27), libgcc1 (>= 1:3.0), libgl1, libglib2.0-0 (>= 2.12.0), libglibmm-2.4-1v5 (>= 2.54.0), libglu1-mesa | libglu1, libgsl23 (>= 2.5), libgtk2.0-0 (>= 2.8.0), libgtkglext1, libgtkmm-2.4-1v5 (>= 1:2.24.0), libsigc++-2.0-0v5 (>= 2.2.0), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4) Suggests: mrtrix-doc, octave, matlab-support Homepage: http://www.brain.org.au/software/mrtrix Priority: extra Section: science Filename: pool/main/m/mrtrix/mrtrix_0.2.13-1~nd18.04+1+nd18.10+1_i386.deb Size: 1503308 SHA256: 7197a0812a970499f114bcb9496ece4d3b28b981dd97dc91e67e6d8d60f9730f SHA1: 88b78ddc987539f61ec18c6a39bf997e643d6cae MD5sum: dbcbceda1d6b2c1561046c8128ed8394 Description: diffusion-weighted MRI white matter tractography Set of tools to perform diffusion-weighted MRI white matter tractography of the brain in the presence of crossing fibres, using Constrained Spherical Deconvolution, and a probabilisitic streamlines algorithm. Magnetic resonance images in DICOM, ANALYZE, or uncompressed NIfTI format are supported. Package: mrtrix-doc Source: mrtrix Version: 0.2.13-1~nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 3402 Depends: neurodebian-popularity-contest Homepage: http://www.brain.org.au/software/mrtrix Priority: extra Section: doc Filename: pool/main/m/mrtrix/mrtrix-doc_0.2.13-1~nd18.04+1+nd18.10+1_all.deb Size: 3180332 SHA256: ba118673f3c1101da2f361ee8c9d4afc3ad36e77b921c20409c459714bd27ebc SHA1: 1429790b372648a3dd61a134a4e87f20c623c913 MD5sum: 5906cce15f9151685edc98baa22a1f3e Description: documentation for mrtrix Set of tools to perform diffusion-weighted MRI white matter tractography of the brain in the presence of crossing fibres, using Constrained Spherical Deconvolution, and a probabilisitic streamlines algorithm. Magnetic resonance images in DICOM, ANALYZE, or uncompressed NIfTI format are supported. . This package provides the documentation in HTML format. Package: ncdu Version: 1.14.1-1~nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 114 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libncursesw6 (>= 6), libtinfo6 (>= 6) Homepage: http://dev.yorhel.nl/ncdu/ Priority: optional Section: admin Filename: pool/main/n/ncdu/ncdu_1.14.1-1~nd18.10+1_i386.deb Size: 47208 SHA256: a7fecc530cf28e34fb02b34fb85af15b5c19e0844610434c76c24ba194a74341 SHA1: 88cc37e95ed79e10d1203c7cfd0edf6ad9e19732 MD5sum: 61d2b94aa92cccf72350877fb608a1c2 Description: ncurses disk usage viewer Ncdu is a ncurses-based du viewer. It provides a fast and easy-to-use interface through famous du utility. It allows one to browse through the directories and show percentages of disk usage with ncurses library. Package: neurodebian Version: 0.40.0~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 93 Depends: python3, wget, neurodebian-archive-keyring, debconf (>= 0.5) | debconf-2.0 Recommends: netselect Suggests: neurodebian-desktop, neurodebian-popularity-contest Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian_0.40.0~nd18.10+1_all.deb Size: 34280 SHA256: 5295af5161976baac617275c76cc5f74d570f6b83ccfff3b42f68c685b8bfef6 SHA1: b4044197e165ebb1d0f62bed753ab0180ebe8ce3 MD5sum: 37d13bdc5b669b97ca6d4f81a2592163 Description: neuroscience-oriented distribution - repository configuration The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . This package enables the NeuroDebian repository on top of a standard Debian or Ubuntu system. Package: neurodebian-archive-keyring Source: neurodebian Version: 0.40.0~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 24 Depends: gnupg2 | gnupg, dirmngr Breaks: neurodebian-keyring (<< 0.34~) Replaces: neurodebian-keyring (<< 0.34~) Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-archive-keyring_0.40.0~nd18.10+1_all.deb Size: 11268 SHA256: 32bd5ef6b0d6c145759f0be50578d3e8a2f19c824f8012f2709cfef31475f3a1 SHA1: 65e432cf6d23a1a2a6aa24ff7d92e6967157390f MD5sum: 19164b395b07d9fc26ff41fd14d56763 Description: neuroscience-oriented distribution - GnuPG archive keys The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . The NeuroDebian project digitally signs its Release files. This package contains the archive keys used for that. Package: neurodebian-desktop Source: neurodebian Version: 0.40.0~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 190 Depends: ssh-askpass-gnome | ssh-askpass, desktop-base, adwaita-icon-theme | gnome-icon-theme, neurodebian-popularity-contest Recommends: reportbug-ng Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-desktop_0.40.0~nd18.10+1_all.deb Size: 117128 SHA256: 8b4f23ada5def668d8e58a2cc835c7ce972fd6bc8abce232bc7ee4d73c8567eb SHA1: fdb61594b86fe27c84d87be0e31d6e9853ebc9f4 MD5sum: 74235a4716258679edf479127b97b3dd Description: neuroscience-oriented distribution - desktop integration The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . This package provides NeuroDebian artwork (icons, background image) and a NeuroDebian menu featuring the most popular neuroscience tools, which will be automatically installed upon initial invocation. Package: neurodebian-dev Source: neurodebian Version: 0.40.0~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 111 Depends: devscripts, neurodebian-archive-keyring Recommends: ubuntu-keyring, python3, zerofree, moreutils, time, debian-archive-keyring, apt-utils, cowbuilder, neurodebian-freeze Suggests: virtualbox-ose, virtualbox-ose-fuse, singularity-container Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-dev_0.40.0~nd18.10+1_all.deb Size: 34160 SHA256: b27b49a6a802fb629868e4c3fdcb16357a233b4dcc74bb005c62a2c9faf345cb SHA1: c49728b24cbbfd65f783cd496f9893474e0df9e1 MD5sum: 0a88be09b7661e2677173cbf64d99781 Description: neuroscience-oriented distribution - development tools The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . This package provides sources and development tools used by NeuroDebian to provide backports for a range of Debian/Ubuntu releases. Package: neurodebian-freeze Source: neurodebian Version: 0.40.0~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 38 Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-freeze_0.40.0~nd18.10+1_all.deb Size: 15436 SHA256: 52cdaafb1fd4c6c34d7e71f1faa1fc9c2f3f930c6ef5ad69892e980a82b67991 SHA1: 5a0ffa2fa5c3125458a1f0ecbf3f7adce01fde2c MD5sum: c09cb0338e9f5106d47f9003e81297c1 Description: nd_freeze tool to freeze APT sources to use snapshots The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . This minimalistic package provides nd_freeze script to be used in rich or minimalistic environments (such as Docker or Singularity recipes) to freeze their APT sources. Intended to assist making such images reproducible. Package: neurodebian-popularity-contest Source: neurodebian Version: 0.40.0~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 28 Depends: popularity-contest Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-popularity-contest_0.40.0~nd18.10+1_all.deb Size: 13300 SHA256: bbf1693197c78ccb51e49cc8ecbef7abe492a5ff8d295a45ff02963e84099fda SHA1: 258481aba2e7942cd45143b94b0f88dca1ed4600 MD5sum: d328dc33d3ce6e8f11d1bbe3d07b7a73 Description: neuroscience-oriented distribution - popcon integration The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . This package is a complement to the generic popularity-contest package to enable anonymous submission of usage statistics to NeuroDebian in addition to the popcon submissions to the underlying distribution (either Debian or Ubuntu) popcon server. . Participating in popcon is important for the following reasons: * Popular packages receive more attention from developers; bugs are fixed faster and updates are provided quicker. * It ensures that support is not dropped for a previous release of Debian or Ubuntu while there are active users. * User statistics may be useful for upstream research software developers seeking funding for continued development. . This requires that popcon is activated for the underlying distribution (Debian or Ubuntu), which can be achieved by running "dpkg-reconfigure popularity-contest" as root. Package: nuitka Version: 0.6.7+ds-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 10364 Depends: neurodebian-popularity-contest, gcc (>= 5.0) | g++ (>= 4.4) | clang (>= 3.0), scons (>= 2.0.0), python3-appdirs | base-files (<< 7.2), python-dev (>= 2.6.6-2) | base-files (>= 11), python3-dev, python3.7:any, python:any (<< 2.8), python:any (>= 2.7~), python3:any (>= 3.3~) Recommends: python-lxml (>= 2.3), strace, chrpath Suggests: ccache Homepage: http://nuitka.net Priority: optional Section: python Filename: pool/main/n/nuitka/nuitka_0.6.7+ds-1~nd18.10+1_all.deb Size: 879764 SHA256: cba249b3c97ea8ec22a341379a30a5783c34be5084781d62346e561766c27380 SHA1: f7ff4091f8a568292752935b2d7854e591f51013 MD5sum: 5f24f1c58b0379b88b192bd2fa550a4e Description: Python compiler with full language support and CPython compatibility This Python compiler achieves full language compatibility and compiles Python code into compiled objects that are not second class at all. Instead they can be used in the same way as pure Python objects. Package: octave-psychtoolbox-3 Source: psychtoolbox-3 Version: 3.0.16.20200130.dfsg1-2~nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 4417 Depends: neurodebian-popularity-contest, octave (>= 4.4.1), freeglut3, libasound2 (>= 1.0.16), libc6 (>= 2.28), libdc1394-22, libfreenect0.5 (>= 1:0.1.1), libgcc1 (>= 1:3.0), libgl1, libglib2.0-0 (>= 2.12.0), libglu1-mesa | libglu1, libgstreamer-plugins-base1.0-0 (>= 1.0.0), libgstreamer1.0-0 (>= 1.4.0), liboctave6, libopenal1 (>= 1.14), libpciaccess0 (>= 0.10.7), libportaudio2 (>= 19+svn20101113), libusb-1.0-0 (>= 2:1.0.9), libx11-6 (>= 2:1.2.99.901), libx11-xcb1, libxcb-dri3-0, libxcb1, libxext6, libxfixes3 (>= 1:5.0), libxi6 (>= 2:1.2.99.4), libxrandr2 (>= 2:1.4.0), libxxf86vm1, psychtoolbox-3-common (= 3.0.16.20200130.dfsg1-2~nd18.10+1), psychtoolbox-3-lib (= 3.0.16.20200130.dfsg1-2~nd18.10+1) Recommends: octave-image, octave-optim, octave-signal, octave-statistics, octave-pkg-dev Provides: psychtoolbox, psychtoolbox-3 Homepage: http://psychtoolbox.org Priority: optional Section: science Filename: pool/main/p/psychtoolbox-3/octave-psychtoolbox-3_3.0.16.20200130.dfsg1-2~nd18.10+1_i386.deb Size: 878580 SHA256: c5c75dc59c86d2f41be64620e31823dfdefd427bed096fba2087718e4010dc48 SHA1: 33863d6774f4ad19e98c13c1f57a330a8ee23368 MD5sum: 7e4cc04e96d2ca4d2c8eb39e82befa30 Description: toolbox for vision research -- Octave bindings Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . See also http://www.psychtoolbox.org/UsingPsychtoolboxOnUbuntu for additional information about systems tune-up and initial configuration. . This package contains bindings for Octave. Package: psychtoolbox-3-common Source: psychtoolbox-3 Version: 3.0.16.20200130.dfsg1-2~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 669446 Depends: neurodebian-popularity-contest Recommends: alsa-utils, gamemode Suggests: gnuplot Homepage: http://psychtoolbox.org Priority: optional Section: science Filename: pool/main/p/psychtoolbox-3/psychtoolbox-3-common_3.0.16.20200130.dfsg1-2~nd18.10+1_all.deb Size: 23948660 SHA256: e93cf183dcf4de68a1a9000b68bc0122059609d5ae46343a0cbbbdcf78bd4c7f SHA1: 5bbc180da1eb8e2d325f68cc85dab40f69631455 MD5sum: a7f4d32548285a5e0174414b75349c18 Description: toolbox for vision research -- arch/interpreter independent part Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains architecture independent files (such as .m scripts) Package: psychtoolbox-3-dbg Source: psychtoolbox-3 Version: 3.0.16.20200130.dfsg1-2~nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 10033 Depends: neurodebian-popularity-contest, octave-psychtoolbox-3 (= 3.0.16.20200130.dfsg1-2~nd18.10+1) Homepage: http://psychtoolbox.org Priority: optional Section: debug Filename: pool/main/p/psychtoolbox-3/psychtoolbox-3-dbg_3.0.16.20200130.dfsg1-2~nd18.10+1_i386.deb Size: 9102548 SHA256: c9c55d54dcb4bc6e8ef5596c3ffa483d3f3cdb2f2fbb7b35775dc0416a006d17 SHA1: 10ec62a6fb823a38f8742734bfc8bd09625ccebd MD5sum: cbbcb837f387dfe86f0ca6a45035018c Description: toolbox for vision research -- debug symbols for binaries Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . To ease debugging and troubleshooting this package contains debug symbols for Octave bindings and other binaries. Build-Ids: 1482bcfa87a41cdf0580f69d8f2626dbbd1f3ca6 1feda448bcfef5e1cda57ade036b32c61d48a6a4 3f96e01d6da07dac1f1633cae056e0460cc4b30b 51fb2d5f2f0679b39e9f395fcea571a6593a4c46 5fc279339f0c836b48086046a33844002fc5f9d0 6dadf183c549e66d9fd24b94c91c402b2a7a9e60 74093bb60d1419c71d61af9ceb558365b5ce5177 86b941c7562d011e9426600ae7ec6bff5a6f0736 cc45552a9373e11c15cdf9f5129b28f520c0aff8 e657e8b67289f734f283e54317e2680831246e79 fca061a98ab163e26d05e056714bef6865d7a53c Package: psychtoolbox-3-lib Source: psychtoolbox-3 Version: 3.0.16.20200130.dfsg1-2~nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 189 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libfontconfig1 (>= 2.12.6), libfreetype6 (>= 2.2.1), libgcc1 (>= 1:3.0), libgl1, libglu1-mesa | libglu1, libstdc++6 (>= 5) Recommends: gstreamer1.0-plugins-base, gstreamer1.0-plugins-good, gstreamer1.0-plugins-bad, gstreamer1.0-plugins-ugly, gstreamer1.0-libav Homepage: http://psychtoolbox.org Priority: optional Section: science Filename: pool/main/p/psychtoolbox-3/psychtoolbox-3-lib_3.0.16.20200130.dfsg1-2~nd18.10+1_i386.deb Size: 77068 SHA256: 9e519de017667c856e10c4ba5cc656258b2b9502f4b20729e0f7d98d58443426 SHA1: 65f488c763b7b72317a5dc45c9943179a5727bf6 MD5sum: 028b7ded42f9dde977d53348fda45e54 Description: toolbox for vision research -- arch-specific parts Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains additional binaries (tools/dynamic libraries) used by both Octave and Matlab frontends. Package: python-datalad Source: datalad Version: 0.11.8-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4573 Depends: neurodebian-popularity-contest, git-annex (>= 6.20180913~) | git-annex-standalone (>= 6.20180913~), patool, python-appdirs, python-fasteners, python-git (>= 2.1.6~), python-humanize, python-iso8601, python-keyrings.alt | python-keyring (<= 8), python-secretstorage, python-keyring, python-mock, python-msgpack, python-pil, python-requests, python-simplejson, python-six (>= 1.8.0), python-tqdm, python-wrapt, python-boto, python-chardet, python:any (<< 2.8), python:any (>= 2.7~) Recommends: python-exif, python-github, python-jsmin, python-html5lib, python-httpretty, python-libxmp, python-lzma, python-mutagen, python-nose, python-pyperclip, python-requests-ftp, python-vcr, python-whoosh Suggests: python-duecredit, python-bs4, python-numpy Provides: python2.7-datalad Homepage: http://datalad.org Priority: optional Section: python Filename: pool/main/d/datalad/python-datalad_0.11.8-1~nd18.10+1_all.deb Size: 950140 SHA256: fe3630b7cd729f5e9b49d6cb8c405e45003fef2a251c4ac6ce857d656cee9e45 SHA1: 83e7489611ccef86579e6d410a1d41a1e0af9532 MD5sum: dcdd83ce07537eb1b9c1e2ad615a225e Description: data files management and distribution platform DataLad is a data management and distribution platform providing access to a wide range of data resources already available online. Using git-annex as its backend for data logistics it provides following facilities built-in or available through additional extensions . - command line and Python interfaces for manipulation of collections of datasets (install, uninstall, update, publish, save, etc.) and separate files/directories (add, get) - extract, aggregate, and search through various sources of metadata (xmp, EXIF, etc; install datalad-neuroimaging for DICOM, BIDS, NIfTI support) - crawl web sites to automatically prepare and update git-annex repositories with content from online websites, S3, etc (install datalad-crawler) . This package installs the module for Python 2, and Recommends install all dependencies necessary for searching and managing datasets, publishing, and testing. If you need base functionality, install without Recommends. Package: python-dcmstack Source: dcmstack Version: 0.7-1~nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 504 Depends: neurodebian-popularity-contest, python-dicom (>= 0.9.7~), python-nibabel (>= 2.0~), python-numpy, python-pydicom, python:any (<< 2.8), python:any (>= 2.7~), libjs-sphinxdoc (>= 1.0) Provides: python2.7-dcmstack Homepage: https://github.com/moloney/dcmstack Priority: optional Section: science Filename: pool/main/d/dcmstack/python-dcmstack_0.7-1~nd18.04+1+nd18.10+1_all.deb Size: 76516 SHA256: e38974bf84bbb6a11fc33d7768a045467d27d0ae2e9519d6a9e7baf8b1f67835 SHA1: bfe0b0326c9cbac143ffe19f435fedbd58d885d2 MD5sum: f01d1c3859b8c20b46818d2a412b8778 Description: DICOM to NIfTI conversion DICOM to NIfTI conversion with the added ability to extract and summarize meta data from the source DICOMs. The meta data can be injected into a NIfTI header extension or written out as a JSON formatted text file. . This package provides the Python package, and command line tools (dcmstack, and nitool), as well as the documentation in HTML format. Package: python-dicom Source: pydicom Version: 1.2.1-1~nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 13 Depends: neurodebian-popularity-contest, python-pydicom Homepage: https://pydicom.github.io Priority: optional Section: oldlibs Filename: pool/main/p/pydicom/python-dicom_1.2.1-1~nd18.04+1+nd18.10+1_all.deb Size: 4952 SHA256: 80af9d0ce8823152776bb64ba197b7a0379a1f650cce1e0854e3d65c3286f97d SHA1: 804c323b96eb7253e3c04fd9ee0840a5eeaf157c MD5sum: e311448ea9bb3adab365e8b115d6963e Description: transitional package for python-pydicom This is a transitional package. It can safely be removed. Package: python-dipy Source: dipy Version: 0.14.0-1~nd17.10+1+nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 8631 Depends: neurodebian-popularity-contest, python (<< 2.8), python (>= 2.7), python:any (>= 2.6.6-7~), python-numpy (>= 1:1.7.1~), python-scipy, python-h5py, python-dipy-lib (>= 0.14.0-1~nd17.10+1+nd18.04+1+nd18.10+1) Recommends: python-matplotlib, python-vtk, python-nose, python-nibabel (>= 2.1.0) Suggests: ipython Provides: python2.7-dipy Homepage: http://dipy.org Priority: extra Section: python Filename: pool/main/d/dipy/python-dipy_0.14.0-1~nd17.10+1+nd18.04+1+nd18.10+1_all.deb Size: 3046660 SHA256: a9e403e587460e64935fc20229f64cd161e90e5d443ee22d7e44885e0f3861b6 SHA1: 9fe86417ee3befce5f6f9da5098fd6e4c4103658 MD5sum: ae39c930df89895f56d42c304d2892b7 Description: Python library for the analysis of diffusion MRI datasets DIPY is a software project for computational neuroanatomy. It focuses on diffusion magnetic resonance imaging (dMRI) analysis and tractography but also contains implementations of other computational imaging methods such as denoising and registration that are applicable to the greater medical imaging and image processing communities. Additionally, DIPY is an international project which brings together scientists across labs and countries to share their state-of-the-art code and expertise in the same codebase, accelerating scientific research in medical imaging. . Here are some of the highlights: - Reconstruction algorithms: CSD, DSI, GQI, DTI, DKI, QBI, SHORE and MAPMRI - Fiber tracking algorithms: deterministic and probabilistic - Native linear and nonlinear registration of images - Fast operations on streamlines (selection, resampling, registration) - Tractography segmentation and clustering - Many image operations, e.g., reslicing or denoising with NLMEANS - Estimation of distances/correspondences between streamlines and connectivity matrices - Interactive visualization of streamlines in the space of images Python-Version: 2.7 Package: python-dipy-doc Source: dipy Version: 0.14.0-1~nd17.10+1+nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 16483 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-dipy Homepage: http://dipy.org Priority: extra Section: doc Filename: pool/main/d/dipy/python-dipy-doc_0.14.0-1~nd17.10+1+nd18.04+1+nd18.10+1_all.deb Size: 12640096 SHA256: f24390555e2b530cf8db8865e0107de442d52750dc2ba9676d622629d76bb573 SHA1: 2141db644b5bfc1e1591d1b4a830127a43e72271 MD5sum: 318826ce1fc981604b0791e8b5142e50 Description: Python library for the analysis of diffusion MRI datasets -- documentation DIPY is a library for the analysis of diffusion magnetic resonance imaging data. . This package provides the documentation in HTML format. Package: python-dipy-lib Source: dipy Version: 0.14.0-1~nd17.10+1+nd18.04+1+nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 11159 Depends: neurodebian-popularity-contest, python-numpy (>= 1:1.14.3), python-numpy-abi9, python (<< 2.8), python (>= 2.7), libc6 (>= 2.4), libgomp1 (>= 4.9) Provides: python2.7-dipy-lib Homepage: http://dipy.org Priority: extra Section: python Filename: pool/main/d/dipy/python-dipy-lib_0.14.0-1~nd17.10+1+nd18.04+1+nd18.10+1_i386.deb Size: 1689968 SHA256: 7038a49437a88cbbce35a80e86a7ef9181989cb3bc8be1aa1c91755dd40f9946 SHA1: 328be0f95db2b507796713af709ef1d83af034d6 MD5sum: 78938b82ff048ea292b318c5f973d2dc Description: Python library for the analysis of diffusion MRI datasets -- extensions DIPY is a library for the analysis of diffusion magnetic resonance imaging data. . This package provides architecture-dependent builds of the extensions. Python-Version: 2.7 Package: python-duecredit Source: duecredit Version: 0.7.0-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 246 Depends: neurodebian-popularity-contest, python-citeproc, python-requests, python-six, python:any (<< 2.8), python:any (>= 2.7~) Homepage: https://github.com/duecredit/duecredit Priority: optional Section: python Filename: pool/main/d/duecredit/python-duecredit_0.7.0-1~nd18.10+1_all.deb Size: 53336 SHA256: 8fa8b952485aff3f97ab260a5c5ab518a05ef9ab5a1f74d9519c1f19838c3dfd SHA1: d5a611c2c364ee73d99fba356f30ee4e3f76b145 MD5sum: c785ec206c0d8a02d2c05628e3f912ed Description: Publications (and donations) tracer - Python 2.X duecredit is being conceived to address the problem of inadequate citation of scientific software and methods, and limited visibility of donation requests for open-source software. . It provides a simple framework (at the moment for Python only) to embed publication or other references in the original code so they are automatically collected and reported to the user at the necessary level of reference detail, i.e. only references for actually used functionality will be presented back if software provides multiple citeable implementations. . To get a sense of what duecredit is about, simply run or your analysis script with `-m duecredit`, e.g. . python -m duecredit examples/example_scipy.py Python-Egg-Name: duecredit Package: python-filelock Version: 3.0.12-1+nd1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 36 Depends: neurodebian-popularity-contest, python:any (<< 2.8), python:any (>= 2.7~) Homepage: https://github.com/benediktschmitt/py-filelock Priority: optional Section: python Filename: pool/main/p/python-filelock/python-filelock_3.0.12-1+nd1~nd18.10+1_all.deb Size: 8216 SHA256: 5a1fe9750c78bf80cfcee8d10c6dcebd98d1f2db89e0d38504bcad0473e0344b SHA1: 7de4baf5ce4ee425ab0e2b0643137eaa4fedabe8 MD5sum: 5e1e562ae4eaecaec370efbaebd6744a Description: platform independent file locking module (Python 2) This package contains a single module, which implements a platform independent file locking mechanism for Python. The lock includes a lock counter and is thread safe. This means, when locking the same lock object twice, it will not block. . This package installs the Python 2 version. Package: python-fsl Source: fslpy Version: 1.2.2-2~nd17.10+1+nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 404 Depends: neurodebian-popularity-contest, python-lxml, python-nibabel, python-six (>= 1.0~), python-deprecation, python-indexed-gzip, python-numpy, python:any (<< 2.8), python:any (>= 2.7~) Recommends: python-wxgtk3.0 Conflicts: fsl-melview (<= 1.0.1+git9-ge661e05~dfsg.1-1) Provides: python2.7-fsl Priority: optional Section: python Filename: pool/main/f/fslpy/python-fsl_1.2.2-2~nd17.10+1+nd18.04+1+nd18.10+1_all.deb Size: 84360 SHA256: b37de08bc92d4a71601e0977397d5f7b41ff56f6f2642fc2811eacc099c9bcf0 SHA1: 7ae8e11914579e9d819221ed5bdfee41476dcf90 MD5sum: d6da7dac6063ca85412cf60315f3a884 Description: FSL Python library Support library for FSL. . This package provides the Python 2 module. Package: python-fsleyes-props Source: fsleyes-props Version: 1.2.1-3~nd17.10+1+nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 404 Depends: neurodebian-popularity-contest, python-wxgtk3.0, python-six (>= 1.0~), python-deprecation, python-matplotlib, python-numpy, python:any (<< 2.8), python:any (>= 2.7~) Conflicts: python-props (<= 1.0~) Replaces: python-props Provides: python-props, python2.7-fsleyes-props Priority: optional Section: python Filename: pool/main/f/fsleyes-props/python-fsleyes-props_1.2.1-3~nd17.10+1+nd18.04+1+nd18.10+1_all.deb Size: 75472 SHA256: a3c7bf4f0ea16f1901a297cfdcb2cbd71dce96a67c9de6d5b21672a21f6d1111 SHA1: f80810cff90c93a3bfb0d079f28b08baee55fee7 MD5sum: f0da0b1d5b0cd4318b48521dd592f971 Description: Python descriptor framework Event programming framework with the ability for automatic CLI generation, and automatic GUI generation (with wxPython). . This package provides the Python 2 module. Package: python-fsleyes-widgets Source: fsleyes-widgets Version: 0.2.0-2~nd17.10+1+nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 374 Depends: neurodebian-popularity-contest, python-wxgtk3.0, python-six (>= 1.0~), python-deprecation, python-matplotlib, python-numpy, python:any (<< 2.8), python:any (>= 2.7~) Provides: python2.7-fsleyes-widgets Priority: optional Section: python Filename: pool/main/f/fsleyes-widgets/python-fsleyes-widgets_0.2.0-2~nd17.10+1+nd18.04+1+nd18.10+1_all.deb Size: 69028 SHA256: 7ee8416939cd22bf3dd81b8bdc42128bc1a752ebf015d65b73fd56590cae05b7 SHA1: a13cc8a6f42600d46b85714f383dd272534e70d0 MD5sum: 4eb8b6b1a9b2e8acafb19a19a29d3b57 Description: Python descriptor framework A collection of GUI widgets and utilities, based on wxPython. . This package provides the Python 2 module. Package: python-git-doc Source: python-git Version: 3.0.5-1~nd1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1028 Depends: neurodebian-popularity-contest, libjs-sphinxdoc (>= 1.0), sphinx-rtd-theme-common (>= 0.4.0+dfsg) Breaks: python-git Replaces: python-git Multi-Arch: foreign Homepage: https://github.com/gitpython-developers/GitPython Priority: optional Section: doc Filename: pool/main/p/python-git/python-git-doc_3.0.5-1~nd1~nd18.10+1_all.deb Size: 127896 SHA256: 43ceedd332ab7d3c2dad50f7c4114f6d1c61d14e0e54499bff1c35c0657cf39a SHA1: a59a355673b64a5586b4754a5c48d7b08964c98b MD5sum: 41b9fb382610208b1c966af563db8ca5 Description: Python library to interact with Git repositories - docs python-git provides object model access to a Git repository, so Python can be used to manipulate it. Repository objects can be opened or created, which can then be traversed to find parent commit(s), trees, blobs, etc. . This package provides the documentation. Package: python-gitdb Version: 2.0.6-1~nd1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 216 Depends: neurodebian-popularity-contest, python-smmap (>> 2), python:any (<< 2.8), python:any (>= 2.7~) Provides: python2.7-gitdb Homepage: https://github.com/gitpython-developers/gitdb Priority: optional Section: python Filename: pool/main/p/python-gitdb/python-gitdb_2.0.6-1~nd1~nd18.10+1_all.deb Size: 47012 SHA256: 18a398d714f037cd4e00fccad3132a94cd800ede55ec47bc1c78a5318f1706ab SHA1: cae0b094238eca559b211787b89caa5d4b7abb5e MD5sum: 756fe2c55ac3626869e7f467068f24c1 Description: pure-Python git object database (Python 2) The GitDB project implements interfaces to allow read and write access to git repositories. In its core lies the db package, which contains all database types necessary to read a complete git repository. These are the LooseObjectDB, the PackedDB and the ReferenceDB which are combined into the GitDB to combine every aspect of the git database. . This package contains the Python 2.x module. Package: python-github Source: pygithub Version: 1.40-1+nd1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 807 Depends: neurodebian-popularity-contest, python-jwt, python-requests, python:any (<< 2.8), python:any (>= 2.7~) Conflicts: python-pygithub Replaces: python-pygithub Provides: python-pygithub Homepage: https://pypi.python.org/pypi/PyGithub Priority: optional Section: python Filename: pool/main/p/pygithub/python-github_1.40-1+nd1~nd18.10+1_all.deb Size: 55580 SHA256: fad36ef5f62946c165709672366a7a34c567f904c0d52b9ca1fe3857e0deb755 SHA1: d08eb12ee7146ab5fb22b43e70b22a4d5919dd15 MD5sum: 0c8a86ec2b8eb4232595e444f931fe07 Description: Access to full Github API v3 from Python2 This is a Python2 library to access the Github API v3. With it, you can manage Github resources (repositories, user profiles, organizations, etc.) from Python scripts. . It covers almost the full API and all methods are tested against the real Github site. Package: python-h5py Source: h5py Version: 2.9.0-6~nd2~nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 3481 Depends: neurodebian-popularity-contest, python (<< 2.8), python (>= 2.7~), python-numpy (>= 1:1.14.3), python-numpy-abi9, python-six, python:any (<< 2.8), python:any (>= 2.7~), libc6 (>= 2.4), libhdf5-openmpi-100 (>= 1.10.0), python-mpi4py Suggests: python-h5py-doc Homepage: http://www.h5py.org/ Priority: optional Section: python Filename: pool/main/h/h5py/python-h5py_2.9.0-6~nd2~nd18.10+1_i386.deb Size: 673616 SHA256: ea03a931dac593993a7ac42c91fb7b8dd88dc295e541407b79fdfe72eea0a06e SHA1: 20f2fc567f9b305e03320b5afb552cd27e45fc1e MD5sum: 349d01810493ac9226a08ae649c882c1 Description: general-purpose Python interface to hdf5 (Python 2) HDF5 for Python (h5py) is a general-purpose Python interface to the Hierarchical Data Format library, version 5. HDF5 is a versatile, mature scientific software library designed for the fast, flexible storage of enormous amounts of data. . From a Python programmer's perspective, HDF5 provides a robust way to store data, organized by name in a tree-like fashion. You can create datasets (arrays on disk) hundreds of gigabytes in size, and perform random-access I/O on desired sections. Datasets are organized in a filesystem-like hierarchy using containers called "groups", and accessed using the tradional POSIX /path/to/resource syntax. . H5py provides a simple, robust read/write interface to HDF5 data from Python. Existing Python and Numpy concepts are used for the interface; for example, datasets on disk are represented by a proxy class that supports slicing, and has dtype and shape attributes. HDF5 groups are presented using a dictionary metaphor, indexed by name. . This package provides the modules for Python 2. Package: python-h5py-dbg Source: h5py Version: 2.9.0-6~nd2~nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 15444 Depends: neurodebian-popularity-contest, python-dbg (<< 2.8), python-dbg (>= 2.7~), python-dbg:any (<< 2.8), python-dbg:any (>= 2.7~), python-numpy (>= 1:1.14.3), python-numpy-abi9, libc6 (>= 2.4), libhdf5-openmpi-100 (>= 1.10.0), python-h5py (= 2.9.0-6~nd2~nd18.10+1), python-numpy-dbg Multi-Arch: same Homepage: http://www.h5py.org/ Priority: optional Section: debug Filename: pool/main/h/h5py/python-h5py-dbg_2.9.0-6~nd2~nd18.10+1_i386.deb Size: 5660644 SHA256: 0ef80b812f599da80cc8f0cf766cbee6664d29e4bf9672dcf4e4e0c2b29b1853 SHA1: 7e6fc1c2ecd692ec9b2b9c06c005fbe2b0425e05 MD5sum: 628dbc7fdd68ee1b2e04a0ea1a946eb8 Description: debug extensions for h5py (Python 2) HDF5 for Python (h5py) is a general-purpose Python interface to the Hierarchical Data Format library, version 5. HDF5 is a versatile, mature scientific software library designed for the fast, flexible storage of enormous amounts of data. . From a Python programmer's perspective, HDF5 provides a robust way to store data, organized by name in a tree-like fashion. You can create datasets (arrays on disk) hundreds of gigabytes in size, and perform random-access I/O on desired sections. Datasets are organized in a filesystem-like hierarchy using containers called "groups", and accessed using the tradional POSIX /path/to/resource syntax. . H5py provides a simple, robust read/write interface to HDF5 data from Python. Existing Python and Numpy concepts are used for the interface; for example, datasets on disk are represented by a proxy class that supports slicing, and has dtype and shape attributes. HDF5 groups are presented using a dictionary metaphor, indexed by name. . This package provides the debug extensions for Python 2. 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HDF5 is a versatile, mature scientific software library designed for the fast, flexible storage of enormous amounts of data. . From a Python programmer's perspective, HDF5 provides a robust way to store data, organized by name in a tree-like fashion. You can create datasets (arrays on disk) hundreds of gigabytes in size, and perform random-access I/O on desired sections. Datasets are organized in a filesystem-like hierarchy using containers called "groups", and accessed using the tradional POSIX /path/to/resource syntax. . H5py provides a simple, robust read/write interface to HDF5 data from Python. Existing Python and Numpy concepts are used for the interface; for example, datasets on disk are represented by a proxy class that supports slicing, and has dtype and shape attributes. HDF5 groups are presented using a dictionary metaphor, indexed by name. . This package provides the documentation. Package: python-joblib Source: joblib Version: 0.13.2-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 875 Depends: neurodebian-popularity-contest, python (<< 2.8), python (>= 2.7), python:any (>= 2.6.6-7~), procps Recommends: python-numpy, python-pytest, python-simplejson, python-lz4, python-psutil Homepage: http://packages.python.org/joblib/ Priority: optional Section: python Filename: pool/main/j/joblib/python-joblib_0.13.2-1~nd18.10+1_all.deb Size: 192420 SHA256: 13d5b3153c85834502a218f31439e3dfb6b97b48d16ac0d601e0492e95aaf2c1 SHA1: a32e5ffda10fdc39701fc921c07436cec7af0198 MD5sum: 9371e853e31da141cfdc580cc8411107 Description: tools to provide lightweight pipelining in Python Joblib is a set of tools to provide lightweight pipelining in Python. In particular, joblib offers: . - transparent disk-caching of the output values and lazy re-evaluation (memoize pattern) - easy simple parallel computing - logging and tracing of the execution . Joblib is optimized to be fast and robust in particular on large, long-running functions and has specific optimizations for numpy arrays. . This package contains the Python 2 version. Package: python-jsonschema-doc Source: python-jsonschema Version: 3.0.2-4~nd1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 546 Depends: neurodebian-popularity-contest, libjs-sphinxdoc (>= 1.0) Homepage: https://github.com/Julian/jsonschema Priority: optional Section: doc Filename: pool/main/p/python-jsonschema/python-jsonschema-doc_3.0.2-4~nd1~nd18.10+1_all.deb Size: 69348 SHA256: ae21895b235bb564a84711d39e1148aeae8f72f517e6a61a842e12f163e19366 SHA1: af8fe1e6717e7cf14b0944de4dd1a9a2d4666569 MD5sum: 963fb93d9fa7e99afbd4a9d4981e28b0 Description: An(other) implementation of JSON Schema (Draft 3 and 4) - doc JSON Schema is a specification for a JSON-based format for defining the structure of JSON data. JSON Schema provides a contract for what JSON data is required for a given application and how it can be modified, much like what XML Schema provides for XML. JSON Schema is intended to provide validation, documentation, and interaction control of JSON data. . This package provides the documentation. Package: python-libxmp Source: python-xmp-toolkit Version: 2.0.1+git20140309.5437b0a-4~nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 145 Depends: neurodebian-popularity-contest, libexempi3, python-tz, python:any (<< 2.8), python:any (>= 2.7~) Suggests: python-libxmp-doc Homepage: http://python-xmp-toolkit.readthedocs.org/ Priority: optional Section: python Filename: pool/main/p/python-xmp-toolkit/python-libxmp_2.0.1+git20140309.5437b0a-4~nd18.04+1+nd18.10+1_all.deb Size: 23440 SHA256: aaad06eb0334b193aa4f706223ae1cdcdd3bfc5eb27f4ed7b1bdf8ced84c5ecc SHA1: eb03f10c86500659929ce0386ae821c1ef1afad7 MD5sum: 4442b4545fc5511295a55f174993a5b5 Description: Python library for XMP metadata Python XMP Toolkit is a library for working with XMP metadata, as well as reading/writing XMP metadata stored in many different file formats. . XMP (Extensible Metadata Platform) facilitates embedding metadata in files using a subset of RDF. Most notably XMP supports embedding metadata in PDF and many image formats, though it is designed to support nearly any file type. . This package provides Python bindings. Package: python-libxmp-doc Source: python-xmp-toolkit Version: 2.0.1+git20140309.5437b0a-4~nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 243 Depends: neurodebian-popularity-contest, libjs-sphinxdoc (>= 1.0) Recommends: python-libxmp, python3-libxmp Homepage: http://python-xmp-toolkit.readthedocs.org/ Priority: optional Section: doc Filename: pool/main/p/python-xmp-toolkit/python-libxmp-doc_2.0.1+git20140309.5437b0a-4~nd18.04+1+nd18.10+1_all.deb Size: 37380 SHA256: 0b4b121389972c82252dfb802ae2e8ab2d03cd48a6ea926346ed1914f999bfc1 SHA1: 08c51e684eafc088d524cfb862b9dc258d5785ac MD5sum: 8b5105e3b484cf83d2c395e7847d5abd Description: Python library for XMP metadata - documentation Python XMP Toolkit is a library for working with XMP metadata, as well as reading/writing XMP metadata stored in many different file formats. . XMP (Extensible Metadata Platform) facilitates embedding metadata in files using a subset of RDF. Most notably XMP supports embedding metadata in PDF and many image formats, though it is designed to support nearly any file type. . This package contains the documentation. Package: python-nibabel Source: nibabel Version: 2.5.1-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 65839 Depends: neurodebian-popularity-contest, python-numpy, python-six (>= 1.3), python2.7:any, python:any (<< 2.8), python:any (>= 2.7~), python-scipy, python-bz2file Recommends: python-dicom, python-fuse Suggests: python-nibabel-doc, python-mock Homepage: http://nipy.sourceforge.net/nibabel Priority: extra Section: python Filename: pool/main/n/nibabel/python-nibabel_2.5.1-1~nd18.10+1_all.deb Size: 2650624 SHA256: 70a47c93543ced2958b5dcae36ade2349770c1811ec4387b091e6713c13a7519 SHA1: a65877c19faefc413a9e6646fc7e3c508578a879 MD5sum: 461d4ba2203b7b71eb902d6a5c6c24ea Description: Python bindings to various neuroimaging data formats NiBabel provides read and write access to some common medical and neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI, NIfTI1, MINC, as well as PAR/REC. The various image format classes give full or selective access to header (meta) information and access to the image data is made available via NumPy arrays. NiBabel is the successor of PyNIfTI. . This package also provides a commandline tools: . - dicomfs - FUSE filesystem on top of a directory with DICOMs - nib-ls - 'ls' for neuroimaging files - parrec2nii - for conversion of PAR/REC to NIfTI images Package: python-nibabel-doc Source: nibabel Version: 2.5.1-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 9282 Depends: neurodebian-popularity-contest, libjs-jquery, libjs-mathjax Homepage: http://nipy.sourceforge.net/nibabel Priority: extra Section: doc Filename: pool/main/n/nibabel/python-nibabel-doc_2.5.1-1~nd18.10+1_all.deb Size: 1486860 SHA256: 711fa6c180ab91ed7c3f4e086de6d1f3f185d2557c292a30b36a5c4881ca487c SHA1: 0780509817a42095698f9b0dae54fbf0b3adb0c1 MD5sum: c7cc616661273b3659558927a28c1c6f Description: documentation for NiBabel NiBabel provides read and write access to some common medical and neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI, NIfTI1, MINC, as well as PAR/REC. The various image format classes give full or selective access to header (meta) information and access to the image data is made available via NumPy arrays. NiBabel is the successor of PyNIfTI. . This package provides the documentation in HTML format. Package: python-nipype Source: nipype Version: 1.1.9-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 10996 Depends: neurodebian-popularity-contest, python (<< 2.8), python (>= 2.7), python-click, python-concurrent.futures, python-configparser, python-dateutil (>= 2.2), python-funcsigs, python-future, python-networkx (>= 1.3), python-nibabel (>= 1.0.0~), python-numpy, python-packaging, python-prov, python-scipy, python-simplejson, python-traits, python:any (>= 2.6.6-7~), python-traits (>= 4.5.0) | python-traits4 (>= 4.5.0), python-psutil Recommends: ipython, python-pytest, graphviz, python-xvfbwrapper, mayavi2, python-mock, python-pydotplus, python-pydot, python-cfflib Suggests: fsl, afni, python-nipy, slicer, matlab-spm8, python-pyxnat, mne-python, elastix, ants, python-pytest-xdist, python-bids Provides: python2.7-nipype Homepage: http://nipy.sourceforge.net/nipype/ Priority: optional Section: python Filename: pool/main/n/nipype/python-nipype_1.1.9-1~nd18.10+1_all.deb Size: 1889844 SHA256: f327ee8a6e7ebf38f38090920f95f570f088d931a7ad4b18d56923cbe10f8a62 SHA1: a03c7463a27f5e1a9565103e975b595eaeabca33 MD5sum: 3d69702ab7fd8c99a7fc20a075863edd Description: Neuroimaging data analysis pipelines in Python Nipype interfaces Python to other neuroimaging packages and creates an API for specifying a full analysis pipeline in Python. Currently, it has interfaces for SPM, FSL, AFNI, Freesurfer, but could be extended for other packages (such as lipsia). Package: python-nipype-doc Source: nipype Version: 1.1.9-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 38766 Depends: neurodebian-popularity-contest, libjs-jquery, libjs-underscore Suggests: python-nipype Homepage: http://nipy.sourceforge.net/nipype/ Priority: optional Section: doc Filename: pool/main/n/nipype/python-nipype-doc_1.1.9-1~nd18.10+1_all.deb Size: 17618396 SHA256: 77df54189964ad510ab29a5e0863470d8dc7f074c4b1d4b4ffd1acf1895ed0b0 SHA1: daf374253869a8605bf42429a5a4b69205048c17 MD5sum: 01c487c8b9527e68fb7b944309dd48e2 Description: Neuroimaging data analysis pipelines in Python -- documentation Nipype interfaces Python to other neuroimaging packages and creates an API for specifying a full analysis pipeline in Python. Currently, it has interfaces for SPM, FSL, AFNI, Freesurfer, but could be extended for other packages (such as lipsia). . This package contains Nipype examples and documentation in various formats. Package: python-nitime-doc Source: nitime Version: 0.8.1-2~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4155 Depends: neurodebian-popularity-contest, libjs-jquery, libjs-underscore Suggests: python3-nitime Homepage: https://nipy.org/nitime Priority: optional Section: doc Filename: pool/main/n/nitime/python-nitime-doc_0.8.1-2~nd18.10+1_all.deb Size: 2424264 SHA256: 5345bee336c7af6c85a5d513d960c00f8fae971875634e91c5899eb194fd74d2 SHA1: 8e65335ba4130f0ad4b8e19a7c7843a64a8450f3 MD5sum: 9bae9036dbe398c6fa437e8d478eac4b Description: timeseries analysis for neuroscience data (nitime) -- documentation Nitime is a Python module for time-series analysis of data from neuroscience experiments. . This package provides the documentation in HTML format. Package: python-patsy Source: patsy Version: 0.5.0+git13-g54dcf7b-1~nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 780 Depends: neurodebian-popularity-contest, python (<< 2.8), python (>= 2.7), python-numpy, python-six, python:any (>= 2.6.6-7~) Recommends: python-pandas, python-openpyxl Suggests: python-patsy-doc Homepage: http://github.com/pydata/patsy Priority: optional Section: python Filename: pool/main/p/patsy/python-patsy_0.5.0+git13-g54dcf7b-1~nd18.04+1+nd18.10+1_all.deb Size: 168512 SHA256: c3d3c9f27bff7debc0150f38401c48c536bcdfa60d656a84ab27b981ab3f2bc3 SHA1: cf8c1fcbfe606dc7470bc06a48f9ddf409e27917 MD5sum: a43101888bbc23fff21723400d080023 Description: statistical models in Python using symbolic formulas patsy is a Python library for describing statistical models (especially linear models, or models that have a linear component) and building design matrices. . This package contains the Python 2 version. Package: python-patsy-doc Source: patsy Version: 0.5.0+git13-g54dcf7b-1~nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1199 Depends: neurodebian-popularity-contest, libjs-jquery, libjs-underscore Suggests: python-patsy Homepage: http://github.com/pydata/patsy Priority: optional Section: doc Filename: pool/main/p/patsy/python-patsy-doc_0.5.0+git13-g54dcf7b-1~nd18.04+1+nd18.10+1_all.deb Size: 344312 SHA256: d6050a0a5e286bffd8e48f4bad949d91e349425498291ee2438ebe84fa0c0239 SHA1: 4d452929deac6fb2c662b7affc7c583b551b5f2e MD5sum: 1cdd78047a08ecf0f2eb205f5722a83a Description: documentation and examples for patsy This package contains documentation and example scripts for python-patsy. Package: python-pprocess Source: pprocess Version: 0.5-2~nd17.04+1+nd17.10+1+nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 762 Depends: neurodebian-popularity-contest, python:any (<< 2.8), python:any (>= 2.7~) Provides: python2.7-pprocess Homepage: http://www.boddie.org.uk/python/pprocess.html Priority: optional Section: python Filename: pool/main/p/pprocess/python-pprocess_0.5-2~nd17.04+1+nd17.10+1+nd18.04+1+nd18.10+1_all.deb Size: 83136 SHA256: 6991a41afee97d6fe499628bd80e14886f30b840410e11b5dd33cf0eb7f66a39 SHA1: 6dbf32f84b2ba7b6e3e57959b893b51610327921 MD5sum: b5ae42157921ba6dec65fa8b513fb2af Description: elementary parallel programming for Python The pprocess module provides elementary support for parallel programming in Python using a fork-based process creation model in conjunction with a channel-based communications model implemented using socketpair and poll. On systems with multiple CPUs or multicore CPUs, processes should take advantage of as many CPUs or cores as the operating system permits. Package: python-props Source: props Version: 0.10.1-1~nd90+1+nd17.04+1+nd17.10+1+nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 651 Depends: neurodebian-popularity-contest, python-wxgtk3.0, python-matplotlib, python-numpy, python-six, python:any (<< 2.8), python:any (>= 2.7~) Provides: python2.7-props Priority: optional Section: python Filename: pool/main/p/props/python-props_0.10.1-1~nd90+1+nd17.04+1+nd17.10+1+nd18.04+1+nd18.10+1_all.deb Size: 117480 SHA256: 349c31a83deb871eebd4da0697b47cabd322a4596d03af076a7b91c9339607ef SHA1: 35e4c440a675c978ebc36526bec930fa9773e51f MD5sum: 070d039c94f75ad388e9c54f8422f60f Description: Python descriptor framework Event programming framework with the ability for automatic CLI generation, and automatic GUI generation (with wxPython). . This package provides the Python 2 module. Package: python-pydicom Source: pydicom Version: 1.2.1-1~nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 14179 Depends: neurodebian-popularity-contest, python (<< 2.8), python (>= 2.7), python:any (>= 2.6.6-7~) Recommends: python-numpy, python-pil Suggests: python-matplotlib, python-gdcm Breaks: python-dicom (<< 1~) Replaces: python-dicom (<< 1~) Provides: python-dicom Homepage: https://pydicom.github.io Priority: optional Section: python Filename: pool/main/p/pydicom/python-pydicom_1.2.1-1~nd18.04+1+nd18.10+1_all.deb Size: 4397200 SHA256: fb39d1a2c0baaf19ba331f62307ec12f86f2d0a2685c4ec51f624f2a88fdfcc6 SHA1: 972c44497368583ad11d149ac3ff8bb83ab3cad7 MD5sum: 914dac81a143f69d835256059a2595a6 Description: DICOM medical file reading and writing (Python 2) pydicom is a pure Python module for parsing DICOM files. DICOM is a standard (http://medical.nema.org) for communicating medical images and related information such as reports and radiotherapy objects. . pydicom makes it easy to read DICOM files into natural pythonic structures for easy manipulation. Modified datasets can be written again to DICOM format files. . This package installs the module for Python 2. Package: python-pydicom-doc Source: pydicom Version: 1.2.1-1~nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2806 Depends: neurodebian-popularity-contest, libjs-sphinxdoc (>= 1.0), sphinx-rtd-theme-common (>= 0.4.0+dfsg) Breaks: python-dicom-doc (<< 1~) Replaces: python-dicom-doc (<< 1~) Provides: python-dicom-doc Homepage: https://pydicom.github.io Priority: optional Section: doc Filename: pool/main/p/pydicom/python-pydicom-doc_1.2.1-1~nd18.04+1+nd18.10+1_all.deb Size: 337300 SHA256: af48a39d248777f862852c73bac1ccbdd62d053b64a44df2c8ea5eef5a2c26ef SHA1: 9e80ec3d9f6218a7fc27b265fa7422bf01e13de0 MD5sum: 864cba70c35e91d60d301e27157f319c Description: DICOM medical file reading and writing (documentation) pydicom is a pure Python module for parsing DICOM files. DICOM is a standard (http://medical.nema.org) for communicating medical images and related information such as reports and radiotherapy objects. . pydicom makes it easy to read DICOM files into natural pythonic structures for easy manipulation. Modified datasets can be written again to DICOM format files. . This package contains the documentation. Package: python-pynwb Source: pynwb Version: 0.5.1-1~nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 687 Depends: neurodebian-popularity-contest, python-dateutil, python-h5py, python-numpy, python-pandas, python-requests, python-ruamel.yaml, python-six, python:any (<< 2.8), python:any (>= 2.7~) Homepage: https://github.com/NeurodataWithoutBorders/pynwb Priority: optional Section: python Filename: pool/main/p/pynwb/python-pynwb_0.5.1-1~nd18.04+1+nd18.10+1_all.deb Size: 98164 SHA256: 031140e1eba9df5a47e80f7a33fa4c60527dbce3502644abe7c2aee85f15a24c SHA1: 1b25cc4c50cbc0d7018956e0ea63ffeb34839e12 MD5sum: be6f5a93386c6f57f1c04b17d0d749d8 Description: Python library for working with Neurodata in the NWB format PyNWB is a Python package for working with NWB files. It provides a high-level API for efficiently working with Neurodata stored in the NWB format. . Neurodata Without Borders: Neurophysiology (NWB:N) is a project to develop a unified data format for cellular-based neurophysiology data, focused on the dynamics of groups of neurons measured under a large range of experimental conditions. Package: python-requests Source: requests Version: 2.8.1-1~bpo8+1~nd90+1+nd17.04+1+nd17.10+1+nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 243 Depends: neurodebian-popularity-contest, python-urllib3 (>= 1.12), python:any (<< 2.8), python:any (>= 2.7~), ca-certificates, python-chardet Suggests: python-ndg-httpsclient, python-openssl, python-pyasn1 Breaks: httpie (<< 0.9.2) Homepage: http://python-requests.org Priority: optional Section: python Filename: pool/main/r/requests/python-requests_2.8.1-1~bpo8+1~nd90+1+nd17.04+1+nd17.10+1+nd18.04+1+nd18.10+1_all.deb Size: 68348 SHA256: 4093b834bcc772a62afd805ec2aa192f77faa1300ab946a4e979313179cce407 SHA1: cc4ef894ece6ae6f951686f0cfa0025f08b96fac MD5sum: 2a42d36df604b86de448ef896333cbf5 Description: elegant and simple HTTP library for Python2, built for human beings Requests allow you to send HTTP/1.1 requests. You can add headers, form data, multipart files, and parameters with simple Python dictionaries, and access the response data in the same way. It's powered by httplib and urllib3, but it does all the hard work and crazy hacks for you. . Features . - International Domains and URLs - Keep-Alive & Connection Pooling - Sessions with Cookie Persistence - Browser-style SSL Verification - Basic/Digest Authentication - Elegant Key/Value Cookies - Automatic Decompression - Unicode Response Bodies - Multipart File Uploads - Connection Timeouts Package: python-requests-whl Source: requests Version: 2.8.1-1~bpo8+1~nd90+1+nd17.04+1+nd17.10+1+nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 353 Depends: neurodebian-popularity-contest, ca-certificates, python-urllib3-whl Homepage: http://python-requests.org Priority: optional Section: python Filename: pool/main/r/requests/python-requests-whl_2.8.1-1~bpo8+1~nd90+1+nd17.04+1+nd17.10+1+nd18.04+1+nd18.10+1_all.deb Size: 319132 SHA256: a55b7f81f5082beda71d1f9e9d62f91e6a386bede0ba2776eb663ef6e23e7eb0 SHA1: 20d48bcc1216f3a3eabd4866511e98f2cd064220 MD5sum: f572e07f94355a33b046abc3d9a89ea9 Description: elegant and simple HTTP library for Python, built for human beings Requests allow you to send HTTP/1.1 requests. You can add headers, form data, multipart files, and parameters with simple Python dictionaries, and access the response data in the same way. It's powered by httplib and urllib3, but it does all the hard work and crazy hacks for you. . Features . - International Domains and URLs - Keep-Alive & Connection Pooling - Sessions with Cookie Persistence - Browser-style SSL Verification - Basic/Digest Authentication - Elegant Key/Value Cookies - Automatic Decompression - Unicode Response Bodies - Multipart File Uploads - Connection Timeouts . This package provides the universal wheel. Package: python-sklearn-lib Source: scikit-learn Version: 0.20.0+dfsg-2~nd18.04+1+nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 7366 Depends: neurodebian-popularity-contest, libatlas3-base, libc6 (>= 2.4), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2), python-numpy (>= 1:1.14.3), python-numpy-abi9, python (<< 2.8), python (>= 2.7~), python:any (<< 2.8), python:any (>= 2.7~) Conflicts: python-scikits-learn-lib Replaces: python-scikits-learn-lib Provides: python2.7-sklearn-lib Homepage: http://scikit-learn.sourceforge.net Priority: optional Section: python Filename: pool/main/s/scikit-learn/python-sklearn-lib_0.20.0+dfsg-2~nd18.04+1+nd18.10+1_i386.deb Size: 1349508 SHA256: a6a8c2c03cf40aa4fa358dcfa53df24f843f08655ee51315af547feb5322bef7 SHA1: 815e674dd7d671c157f2b38e83c77e93a388a66e MD5sum: e8dff6086da403432004ae150c050a5f Description: low-level implementations and bindings for scikit-learn This is an add-on package for python-sklearn. It provides low-level implementations and custom Python bindings for the LIBSVM library. Package: python-wrapt Version: 1.9.0-4~nd0~nd17.04+1+nd17.10+1+nd18.04+1+nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 123 Depends: neurodebian-popularity-contest, python-six, python (<< 2.8), python (>= 2.7~), python:any (<< 2.8), python:any (>= 2.7~), libc6 (>= 2.4) Homepage: https://github.com/GrahamDumpleton/wrapt Priority: optional Section: python Filename: pool/main/p/python-wrapt/python-wrapt_1.9.0-4~nd0~nd17.04+1+nd17.10+1+nd18.04+1+nd18.10+1_i386.deb Size: 28544 SHA256: da5a67d307732d8a4d8f669b4147619768b3767477fa1398bc3f1426f773a037 SHA1: c386ad54951e87cec0c124d6f6cad8e010be22e3 MD5sum: b2c874e741d9e101eaa3750d7e743d74 Description: decorators, wrappers and monkey patching. - Python 2.x The aim of the wrapt module is to provide a transparent object proxy for Python, which can be used as the basis for the construction of function wrappers and decorator functions. . The wrapt module focuses very much on correctness. It therefore goes way beyond existing mechanisms such as functools.wraps() to ensure that decorators preserve introspectability, signatures, type checking abilities etc. The decorators that can be constructed using this module will work in far more scenarios than typical decorators and provide more predictable and consistent behaviour. . To ensure that the overhead is as minimal as possible, a C extension module is used for performance critical components. An automatic fallback to a pure Python implementation is also provided where a target system does not have a compiler to allow the C extension to be compiled. . This package contains the Python 2.x module. Package: python3-datalad Source: datalad Version: 0.17.5-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4665 Depends: neurodebian-popularity-contest, git-annex (>= 8.20200309~) | git-annex-standalone (>= 8.20200309~), patool, p7zip-full, python3 (>= 3.7), python3-annexremote, python3-distro, python3-distutils | libpython3-stdlib (<= 3.6.4~rc1-2), python3-fasteners (>= 0.14~), python3-gitlab, python3-humanize, python3-importlib-metadata | python3 (>> 3.10), python3-iso8601, python3-keyring, python3-keyrings.alt | python3-keyring (<= 8), python3-mock, python3-msgpack, python3-pil, python3-platformdirs, python3-requests (>= 1.2), python3-secretstorage, python3-simplejson, python3-six, python3-tqdm, python3-chardet, python3-packaging, python3:any Recommends: python3-boto, python3-exif, python3-html5lib, python3-httpretty, python3-jsmin, python3-libxmp, python3-lzma, python3-mutagen, python3-pytest, python3-pyperclip, python3-requests-ftp, python3-vcr, python3-whoosh Suggests: python3-duecredit, datalad-container, datalad-crawler, datalad-neuroimaging, python3-bs4, python3-numpy Breaks: datalad-container (<< 1.1.2) Homepage: https://datalad.org Priority: optional Section: python Filename: pool/main/d/datalad/python3-datalad_0.17.5-1~nd+1_all.deb Size: 958872 SHA256: 1f3e16c16863bab40ba92405109ab26c78f19e3e86e2b38733a035221c4e7744 SHA1: 873da190eb5ee83576ff519c2d564e1f841abe5b MD5sum: 7a97a6f55929cc103dd60d7783a9565e Description: data files management and distribution platform DataLad is a data management and distribution platform providing access to a wide range of data resources already available online. Using git-annex as its backend for data logistics it provides following facilities built-in or available through additional extensions . - command line and Python interfaces for manipulation of collections of datasets (install, uninstall, update, publish, save, etc.) and separate files/directories (add, get) - extract, aggregate, and search through various sources of metadata (xmp, EXIF, etc; install datalad-neuroimaging for DICOM, BIDS, NIfTI support) - crawl web sites to automatically prepare and update git-annex repositories with content from online websites, S3, etc (install datalad-crawler) . This package installs the module for Python 3, and Recommends install all dependencies necessary for searching and managing datasets, publishing, and testing. If you need base functionality, install without Recommends. Package: python3-dcmstack Source: dcmstack Version: 0.8-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 509 Depends: neurodebian-popularity-contest, python3-dicom (>= 0.9.7~), python3-nibabel (>= 2.0~), python3-numpy, python3-pydicom, python3:any, libjs-sphinxdoc (>= 1.0) Conflicts: python-dcmstack Homepage: https://github.com/moloney/dcmstack Priority: optional Section: science Filename: pool/main/d/dcmstack/python3-dcmstack_0.8-1~nd18.10+1_all.deb Size: 75964 SHA256: 3d3fcb648683814ddf898ae931909a96834a4f0d25f673bbcccf238b0bc7b1d9 SHA1: 5ee0bef8d27ed974ec700f61f8ece3e168f612ac MD5sum: 06aaad8e927c58f0eecc5c5db6a6452c Description: DICOM to NIfTI conversion - python3 package DICOM to NIfTI conversion with the added ability to extract and summarize meta data from the source DICOMs. The meta data can be injected into a NIfTI header extension or written out as a JSON formatted text file. . This package provides the Python3 package. Package: python3-dicom Source: pydicom Version: 1.2.1-1~nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 13 Depends: neurodebian-popularity-contest, python3-pydicom Homepage: https://pydicom.github.io Priority: optional Section: oldlibs Filename: pool/main/p/pydicom/python3-dicom_1.2.1-1~nd18.04+1+nd18.10+1_all.deb Size: 4952 SHA256: bb7916879010bd852bf40b4108b14036ae87be15772f7c40150b3b6206edd89e SHA1: a81da1ca4b29b84b955bab1a862106330fdb6927 MD5sum: 1c0ea63fdb91b42df0ab4574eeb08ae0 Description: transitional package for python3-pydicom This is a transitional package. It can safely be removed. Package: python3-diskcache Source: diskcache Version: 4.0.0-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 209 Depends: neurodebian-popularity-contest, python3:any Homepage: http://www.grantjenks.com/docs/diskcache/ Priority: optional Section: python Filename: pool/main/d/diskcache/python3-diskcache_4.0.0-1~nd18.10+1_all.deb Size: 33652 SHA256: 221cfa690bb877370b30db7672823ceadd4232f6d46b66b8863b6add2fa21689 SHA1: 245da8580ef977cc2e3196309b583043e0a8b11a MD5sum: 3d0a29cdd7d18fbfced25303ea57179d Description: Python module for Disk and file backed persistent cache DiskCache is an Apache2 licensed disk and file backed cache library, written in pure-Python. Its features include . - Django compatible API - Thread-safe and process-safe - Supports multiple eviction policies (LRU and LFU included) - Keys support “tag” metadata and eviction Package: python3-distro Source: python-distro Version: 1.3.0-2~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 61 Depends: neurodebian-popularity-contest, lsb-release, python3:any Homepage: https://github.com/nir0s/distro Priority: optional Section: python Filename: pool/main/p/python-distro/python3-distro_1.3.0-2~nd18.10+1_all.deb Size: 12712 SHA256: 364f18b167cc32a6ea05a091a91da7a198bcf831529f48bf0924b50ace1aa755 SHA1: 6a40ea19c99f6cd690cd59be0bc6459bdea96c4b MD5sum: 869cf45b4936c444c233eb02a152895c Description: Linux OS platform information API distro (for: Linux Distribution) provides information about the Linux distribution it runs on, such as a reliable machine-readable ID, or version information. . It is a renewed alternative implementation for Python's original platform.linux_distribution function, but it also provides much more functionality which isn't necessarily Python bound like a command-line interface. . This is the Python 3 version of the library. Package: python3-duecredit Source: duecredit Version: 0.7.0-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 248 Depends: neurodebian-popularity-contest, python3-citeproc, python3-requests, python3-six, python3:any Homepage: https://github.com/duecredit/duecredit Priority: optional Section: python Filename: pool/main/d/duecredit/python3-duecredit_0.7.0-1~nd18.10+1_all.deb Size: 53572 SHA256: 24f11d8ce96e025e80b8aee2e3f835c16728f2c8da33aa3c70426aa41e67b2ce SHA1: 9098213c20bf19e4221d08d702477e0e601c85d7 MD5sum: ad414746cd4930cfa7f5d83b3b964e8c Description: Publications (and donations) tracer duecredit is being conceived to address the problem of inadequate citation of scientific software and methods, and limited visibility of donation requests for open-source software. . It provides a simple framework (at the moment for Python only) to embed publication or other references in the original code so they are automatically collected and reported to the user at the necessary level of reference detail, i.e. only references for actually used functionality will be presented back if software provides multiple citeable implementations. . To get a sense of what duecredit is about, simply run or your analysis script with `-m duecredit`, e.g. . python3 -m duecredit examples/example_scipy.py Python-Egg-Name: duecredit Package: python3-filelock Source: python-filelock Version: 3.0.12-1+nd1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 36 Depends: neurodebian-popularity-contest, python3:any Homepage: https://github.com/benediktschmitt/py-filelock Priority: optional Section: python Filename: pool/main/p/python-filelock/python3-filelock_3.0.12-1+nd1~nd18.10+1_all.deb Size: 8288 SHA256: 5b597eebeeb1faae07dd3a304a1caf0fcc12d5d1cba6bda9c5495ddc04da9fd1 SHA1: 13f31aceff7d42364235512e6701956c7bdc2b6f MD5sum: 92c47fc117bf04b7f8da5e9bbec7e1c7 Description: platform independent file locking module (Python 3) This package contains a single module, which implements a platform independent file locking mechanism for Python. The lock includes a lock counter and is thread safe. This means, when locking the same lock object twice, it will not block. . This package installs the Python 3 version. Package: python3-fsl Source: fslpy Version: 1.2.2-2~nd17.10+1+nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 403 Depends: neurodebian-popularity-contest, python3-lxml, python3-nibabel, python3-six (>= 1.0~), python3-deprecation, python3-indexed-gzip, python3-numpy, python3-wxgtk4.0, python3:any Priority: optional Section: python Filename: pool/main/f/fslpy/python3-fsl_1.2.2-2~nd17.10+1+nd18.04+1+nd18.10+1_all.deb Size: 84372 SHA256: 5c989f43792b5ef37f821954e2666222eaeb267764b51c28811692e967430969 SHA1: 7f59dc8b634105ec7f7a3558b24f59b00577bd58 MD5sum: 5fce8dbb1d59cb5a4a414c6739bc040f Description: FSL Python library Support library for FSL. . This package provides the Python 3 module. Package: python3-git Source: python-git Version: 3.0.5-1~nd1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1678 Depends: neurodebian-popularity-contest, git (>= 1:1.7) | git-core (>= 1:1.5.3.7), python3-gitdb (>= 2), python3:any Suggests: python-git-doc Homepage: https://github.com/gitpython-developers/GitPython Priority: optional Section: python Filename: pool/main/p/python-git/python3-git_3.0.5-1~nd1~nd18.10+1_all.deb Size: 307780 SHA256: 0b6c95cf084fda484a7aa9bb6e4f6c0f39c4d2971b206bbb76c0e72b47c91615 SHA1: 74c8ea7a040f01b212a7145153fd793cdfe60179 MD5sum: cceb4917d8e6ee8ad2f0fb5159fcd16f Description: Python library to interact with Git repositories - Python 3.x python-git provides object model access to a Git repository, so Python can be used to manipulate it. Repository objects can be opened or created, which can then be traversed to find parent commit(s), trees, blobs, etc. . This package provides the Python 3.x module. Package: python3-gitdb Source: python-gitdb Version: 2.0.6-1~nd1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 216 Depends: neurodebian-popularity-contest, python3-smmap (>> 2), python3:any Homepage: https://github.com/gitpython-developers/gitdb Priority: optional Section: python Filename: pool/main/p/python-gitdb/python3-gitdb_2.0.6-1~nd1~nd18.10+1_all.deb Size: 47076 SHA256: 3a83974c9b5ef914081df6bbea0d03f16cdfb0f2452a5c9f8e7f0f6c325e8e9b SHA1: 20f2d5afb10482a033a62713dcef8ba29f77351e MD5sum: 539fa7dd549fd7cdc33aed216e1e99d4 Description: pure-Python git object database (Python 3) The GitDB project implements interfaces to allow read and write access to git repositories. In its core lies the db package, which contains all database types necessary to read a complete git repository. These are the LooseObjectDB, the PackedDB and the ReferenceDB which are combined into the GitDB to combine every aspect of the git database. . This package contains the Python 3.x module. Package: python3-github Source: pygithub Version: 1.40-1+nd1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 805 Depends: neurodebian-popularity-contest, python3-jwt, python3-requests, python3:any Conflicts: python3-pygithub Replaces: python3-pygithub Homepage: https://pypi.python.org/pypi/PyGithub Priority: optional Section: python Filename: pool/main/p/pygithub/python3-github_1.40-1+nd1~nd18.10+1_all.deb Size: 55632 SHA256: 9c6136270fa60920a2c3f53e7255d080240a82e9355f77424daecf04da469141 SHA1: 8ff21b95c9d40e9b330481ecc6b4566a41deebf7 MD5sum: 2edfca08552e15313ba6fa155f7ee1e7 Description: Access the full Github API v3 from Python3 This is a Python3 library to access the Github API v3. With it, you can manage Github resources (repositories, user profiles, organizations, etc.) from Python scripts. . It covers almost the full API and all methods are tested against the real Github site. Package: python3-h5py Source: h5py Version: 2.9.0-6~nd2~nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 6689 Depends: neurodebian-popularity-contest, python3 (<< 3.8), python3 (>= 3.6~), python3-numpy (>= 1:1.14.3), python3-numpy-abi9, python3-six, python3:any, libc6 (>= 2.4), libhdf5-openmpi-100 (>= 1.10.0), python3-mpi4py Suggests: python-h5py-doc Homepage: http://www.h5py.org/ Priority: optional Section: python Filename: pool/main/h/h5py/python3-h5py_2.9.0-6~nd2~nd18.10+1_i386.deb Size: 915856 SHA256: 783350be20041d8214ff7a4ada2c3c0a856f0ec51d5816efd1f93f4cbf57e05b SHA1: 855eb1f9cbe7b556191531d5cd8c9ca5f5c93654 MD5sum: 8641e7effe480c95ce1aa6264bc6c7dc Description: general-purpose Python interface to hdf5 (Python 3) HDF5 for Python (h5py) is a general-purpose Python interface to the Hierarchical Data Format library, version 5. HDF5 is a versatile, mature scientific software library designed for the fast, flexible storage of enormous amounts of data. . From a Python programmer's perspective, HDF5 provides a robust way to store data, organized by name in a tree-like fashion. You can create datasets (arrays on disk) hundreds of gigabytes in size, and perform random-access I/O on desired sections. Datasets are organized in a filesystem-like hierarchy using containers called "groups", and accessed using the tradional POSIX /path/to/resource syntax. . H5py provides a simple, robust read/write interface to HDF5 data from Python. Existing Python and Numpy concepts are used for the interface; for example, datasets on disk are represented by a proxy class that supports slicing, and has dtype and shape attributes. HDF5 groups are presented using a dictionary metaphor, indexed by name. . This package provides the modules for Python 3. Package: python3-h5py-dbg Source: h5py Version: 2.9.0-6~nd2~nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 36831 Depends: neurodebian-popularity-contest, python3-dbg (<< 3.8), python3-dbg (>= 3.6~), python3-numpy (>= 1:1.14.3), python3-numpy-abi9, libc6 (>= 2.4), libhdf5-openmpi-100 (>= 1.10.0), python3-h5py (= 2.9.0-6~nd2~nd18.10+1), python3-numpy-dbg Multi-Arch: same Homepage: http://www.h5py.org/ Priority: optional Section: debug Filename: pool/main/h/h5py/python3-h5py-dbg_2.9.0-6~nd2~nd18.10+1_i386.deb Size: 12571824 SHA256: a78df07986d21c01b047f0518844243cbce412fe96bfac0a4d7695d815e4cc89 SHA1: 8512da067e809f61d1f4f175a06f3353b583eb51 MD5sum: 99f087ec85abb0e3b6ea802293d33281 Description: debug extensions for h5py (Python 3) HDF5 for Python (h5py) is a general-purpose Python interface to the Hierarchical Data Format library, version 5. HDF5 is a versatile, mature scientific software library designed for the fast, flexible storage of enormous amounts of data. . From a Python programmer's perspective, HDF5 provides a robust way to store data, organized by name in a tree-like fashion. You can create datasets (arrays on disk) hundreds of gigabytes in size, and perform random-access I/O on desired sections. Datasets are organized in a filesystem-like hierarchy using containers called "groups", and accessed using the tradional POSIX /path/to/resource syntax. . H5py provides a simple, robust read/write interface to HDF5 data from Python. Existing Python and Numpy concepts are used for the interface; for example, datasets on disk are represented by a proxy class that supports slicing, and has dtype and shape attributes. HDF5 groups are presented using a dictionary metaphor, indexed by name. . This package provides the debug extensions for Python 3. 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It provides APIs for specifying data models, reading and writing data to different storage backends, and representing data with Python object. Package: python3-joblib Source: joblib Version: 0.13.2-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 870 Depends: neurodebian-popularity-contest, python3:any (>= 3.3~), procps Recommends: python3-numpy, python3-pytest, python3-simplejson, python3-psutil Homepage: http://packages.python.org/joblib/ Priority: optional Section: python Filename: pool/main/j/joblib/python3-joblib_0.13.2-1~nd18.10+1_all.deb Size: 189356 SHA256: 898043884c7febb0f13d917a53d97c3636d3f2b173d5bcf2b51f08924b58e663 SHA1: 755edd0b9d7514341c00fc2964ce7da50c0f7258 MD5sum: 5df63bd901723e6bfb8de09bca91162d Description: tools to provide lightweight pipelining in Python Joblib is a set of tools to provide lightweight pipelining in Python. In particular, joblib offers: . - transparent disk-caching of the output values and lazy re-evaluation (memoize pattern) - easy simple parallel computing - logging and tracing of the execution . Joblib is optimized to be fast and robust in particular on large, long-running functions and has specific optimizations for numpy arrays. . This package contains the Python 3 version. Package: python3-jsonschema Source: python-jsonschema Version: 3.0.2-4~nd1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 252 Depends: neurodebian-popularity-contest, python3-attr, python3-pkg-resources, python3-setuptools, python3-six (>= 1.11.0), python3-pyrsistent, python3:any Suggests: python-jsonschema-doc Homepage: https://github.com/Julian/jsonschema Priority: optional Section: python Filename: pool/main/p/python-jsonschema/python3-jsonschema_3.0.2-4~nd1~nd18.10+1_all.deb Size: 43208 SHA256: baf52a824cef3df20e2ee212e6b1f1b0213575c72b46ec8a43987f99b3acce38 SHA1: b12905cb6ea7f74c88b5664f6692d49efd907165 MD5sum: 92ccb9800052828930af6e8f1a481caf Description: An(other) implementation of JSON Schema (Draft 3 and 4) - Python 3.x JSON Schema is a specification for a JSON-based format for defining the structure of JSON data. JSON Schema provides a contract for what JSON data is required for a given application and how it can be modified, much like what XML Schema provides for XML. JSON Schema is intended to provide validation, documentation, and interaction control of JSON data. . This package contains the Python 3.x module. Package: python3-libxmp Source: python-xmp-toolkit Version: 2.0.1+git20140309.5437b0a-4~nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 145 Depends: neurodebian-popularity-contest, libexempi3, python3-tz, python3:any (>= 3.3~) Suggests: python-libxmp-doc Homepage: http://python-xmp-toolkit.readthedocs.org/ Priority: optional Section: python Filename: pool/main/p/python-xmp-toolkit/python3-libxmp_2.0.1+git20140309.5437b0a-4~nd18.04+1+nd18.10+1_all.deb Size: 23524 SHA256: 27f64fa73c22cc9b65ad4886fbfffb1fd3c3d08d50ff92f654a7ddb2fa6a16d7 SHA1: 4f0bc375854330ba887816360cb1d8133a9f66b8 MD5sum: 0fac9ad5fdc1a8694964e0c12cc06336 Description: Python3 library for XMP metadata Python XMP Toolkit is a library for working with XMP metadata, as well as reading/writing XMP metadata stored in many different file formats. . XMP (Extensible Metadata Platform) facilitates embedding metadata in files using a subset of RDF. Most notably XMP supports embedding metadata in PDF and many image formats, though it is designed to support nearly any file type. . This package provides Python3 bindings. Package: python3-neo Source: neo Version: 0.7.2-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 3484 Depends: neurodebian-popularity-contest, python3-numpy, python3-quantities, python3:any Recommends: python3-scipy (>= 0.8~), python3-tables (>= 2.2~), libjs-jquery, libjs-underscore Suggests: python3-nose Homepage: http://neuralensemble.org/trac/neo Priority: optional Section: python Filename: pool/main/n/neo/python3-neo_0.7.2-1~nd18.10+1_all.deb Size: 1309016 SHA256: 7fde654f6cbbece0ed58e2217cbafce219bed3418a954916058205dd119a7694 SHA1: 5e424c19b3d5eb77120bc790be61204582e771d5 MD5sum: ad28c61a59d329de8bad1b45d4526ebb Description: Python IO library for electrophysiological data formats NEO stands for Neural Ensemble Objects and is a project to provide common classes and concepts for dealing with electro-physiological (in vivo and/or simulated) data to facilitate collaborative software/algorithm development. In particular Neo provides: a set a classes for data representation with precise definitions, an IO module with a simple API, documentation, and a set of examples. . NEO offers support for reading data from numerous proprietary file formats (e.g. Spike2, Plexon, AlphaOmega, BlackRock, Axon), read/write support for various open formats (e.g. KlustaKwik, Elan, WinEdr, WinWcp, PyNN), as well as support common file formats, such as HDF5 with Neo-structured content (NeoHDF5, NeoMatlab). . Neo's IO facilities can be seen as a pure-Python and open-source Neuroshare replacement. Package: python3-nibabel Source: nibabel Version: 2.5.1-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 65824 Depends: neurodebian-popularity-contest, python3-numpy (>= 1.2), python3-six (>= 1.3), python3:any, python3-scipy Recommends: python3-dicom, python3-fuse Suggests: python-nibabel-doc, python3-mock Homepage: http://nipy.sourceforge.net/nibabel Priority: extra Section: python Filename: pool/main/n/nibabel/python3-nibabel_2.5.1-1~nd18.10+1_all.deb Size: 2646392 SHA256: 612ccda56ed3b131c1b102419d658138699003abb93a4d0943272560ca60e25b SHA1: 8977b5e04fefa55a66ef025151ee83aa472242f0 MD5sum: 3b83c9f37611e1c93c3e388f2087bf19 Description: Python3 bindings to various neuroimaging data formats NiBabel provides read and write access to some common medical and neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI, NIfTI1, MINC, as well as PAR/REC. The various image format classes give full or selective access to header (meta) information and access to the image data is made available via NumPy arrays. NiBabel is the successor of PyNIfTI. Package: python3-nitime Source: nitime Version: 0.8.1-2~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 9380 Depends: neurodebian-popularity-contest, cython3, python3-matplotlib, python3-networkx, python3-nibabel, python3-numpy, python3-scipy, python3:any Recommends: python3-nose Homepage: https://nipy.org/nitime Priority: optional Section: python Filename: pool/main/n/nitime/python3-nitime_0.8.1-2~nd18.10+1_all.deb Size: 2543752 SHA256: 7af07ea3e38348f036cf7b06fb140e181f2df2225808427c7ae97909150d49e5 SHA1: ab4c18524c6e8c2e7570389b514f7ef33b5d00ee MD5sum: 54d414c12d4a15fb65c113389eaaa05c Description: timeseries analysis for neuroscience data (nitime) Nitime is a Python module for time-series analysis of data from neuroscience experiments. It contains a core of numerical algorithms for time-series analysis both in the time and spectral domains, a set of container objects to represent time-series, and auxiliary objects that expose a high level interface to the numerical machinery and make common analysis tasks easy to express with compact and semantically clear code. Package: python3-patsy Source: patsy Version: 0.5.0+git13-g54dcf7b-1~nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 779 Depends: neurodebian-popularity-contest, python3-numpy, python3-six, python3:any (>= 3.2~) Recommends: python3-pandas Suggests: python-patsy-doc Homepage: http://github.com/pydata/patsy Priority: optional Section: python Filename: pool/main/p/patsy/python3-patsy_0.5.0+git13-g54dcf7b-1~nd18.04+1+nd18.10+1_all.deb Size: 168496 SHA256: f997b1e563ab297e8ebc54276bfd9562e457bbef27f49f07b64d97ced6fe6468 SHA1: dc1f8bfa5b15a16c7eb244650467b7a13ab7dcd2 MD5sum: 48627681adce48307ebe25c54f69ae42 Description: statistical models in Python using symbolic formulas patsy is a Python library for describing statistical models (especially linear models, or models that have a linear component) and building design matrices. . This package contains the Python 3 version. Package: python3-pydicom Source: pydicom Version: 1.2.1-1~nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 14179 Depends: neurodebian-popularity-contest, python3:any Recommends: python3-numpy, python3-pil Suggests: python3-matplotlib, python3-gdcm Breaks: python3-dicom (<< 1~) Replaces: python3-dicom (<< 1~) Provides: python3-dicom Homepage: https://pydicom.github.io Priority: optional Section: python Filename: pool/main/p/pydicom/python3-pydicom_1.2.1-1~nd18.04+1+nd18.10+1_all.deb Size: 4396980 SHA256: 9c84a54ff4dbfeea43f7a40954dfc26282e9a7d349a83d3ed1ec8a5cc7119bbb SHA1: 2afad309201080f2e0ca420c822b07d76d551676 MD5sum: 8737fe5d45968d220e1c8f978ab957bc Description: DICOM medical file reading and writing (Python 3) pydicom is a pure Python module for parsing DICOM files. DICOM is a standard (http://medical.nema.org) for communicating medical images and related information such as reports and radiotherapy objects. . pydicom makes it easy to read DICOM files into natural pythonic structures for easy manipulation. Modified datasets can be written again to DICOM format files. . This package installs the module for Python 3. Package: python3-pynwb Source: pynwb Version: 1.0.3-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 424 Depends: neurodebian-popularity-contest, python3-chardet, python3-dateutil, python3-h5py (>= 2.7.1), python3-hdmf, python3-numpy, python3-pandas, python3-ruamel.yaml, python3-six, python3:any Homepage: https://github.com/NeurodataWithoutBorders/pynwb Priority: optional Section: python Filename: pool/main/p/pynwb/python3-pynwb_1.0.3-1~nd18.10+1_all.deb Size: 60496 SHA256: 2eb5a68495de8d7798e4ed72a2da0f862e3d9b55d3e4f6cafda039b742501158 SHA1: 59952891ae6f4c440acd66ce6f53c63a7f90c5fd MD5sum: fde10e8e50bd8fb657c0c94438ea3a4c Description: Python library for working with Neurodata in the NWB format PyNWB is a Python package for working with NWB files. It provides a high-level API for efficiently working with Neurodata stored in the NWB format. . Neurodata Without Borders: Neurophysiology (NWB:N) is a project to develop a unified data format for cellular-based neurophysiology data, focused on the dynamics of groups of neurons measured under a large range of experimental conditions. Package: python3-pyrsistent Source: pyrsistent Version: 0.15.5-1~nd1~nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 270 Depends: neurodebian-popularity-contest, python3 (<< 3.8), python3 (>= 3.6~), python3-six, python3:any, libc6 (>= 2.4) Multi-Arch: same Homepage: https://github.com/tobgu/pyrsistent/ Priority: optional Section: python Filename: pool/main/p/pyrsistent/python3-pyrsistent_0.15.5-1~nd1~nd18.10+1_i386.deb Size: 59324 SHA256: ac809d6a96ade64f928e8237b35dc6ef2acf06a2c92db171ae9022bdc124c866 SHA1: d7e7c7d0e178e2c3741ef0643a8330bbc23907ed MD5sum: b7f1a715ed6339538fb0233b87d0f302 Description: persistent/functional/immutable data structures for Python Pyrsistent is a number of persistent collections (sometimes referred to as functional data structures). Persistent in the sense that they are immutable. . All methods on a data structure that would normally mutate it instead return a new copy of the structure containing the requested updates. The original structure is left untouched. . The collection types and key features currently implemented are: . * PVector, similar to a python list * PMap, similar to dict * PSet, similar to set * PRecord, a PMap on steroids with fixed fields, optional type and invariant checking and much more * PClass, a Python class fixed fields, optional type and invariant checking and much more * Checked collections, PVector, PMap and PSet with optional type and invariance checks and more * PBag, similar to collections.Counter * PList, a classic singly linked list * PDeque, similar to collections.deque * Immutable object type (immutable) built on the named tuple * freeze and thaw functions to convert between pythons standard collections and pyrsistent collections. * Flexible transformations of arbitrarily complex structures built from PMaps and PVectors. Package: python3-quantities Source: python-quantities Version: 0.12.3-1~nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 351 Depends: neurodebian-popularity-contest, python3-numpy, python3:any Suggests: python3-unittest2 Homepage: http://packages.python.org/quantities/ Priority: optional Section: python Filename: pool/main/p/python-quantities/python3-quantities_0.12.3-1~nd18.10+1_all.deb Size: 55248 SHA256: 10ff00301808b611090e13b8b4a8cc740370568d3e4f3c84ae0483d0237bdaf9 SHA1: f71b9a0a62f9931a603de041ed00d6615cf7cc0c MD5sum: 6e16e557d1baf480e8df1bf1f4bb5725 Description: Library for computation of physical quantities with units, based on numpy Quantities is designed to handle arithmetic and conversions of physical quantities, which have a magnitude, dimensionality specified by various units, and possibly an uncertainty. Quantities builds on the popular numpy library and is designed to work with numpy ufuncs, many of which are already supported. Package: python3-requests Source: requests Version: 2.8.1-1~bpo8+1~nd90+1+nd17.04+1+nd17.10+1+nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 240 Depends: neurodebian-popularity-contest, python3-urllib3 (>= 1.12), python3:any (>= 3.0~), ca-certificates, python3-chardet Suggests: python3-ndg-httpsclient, python3-openssl, python3-pyasn1 Homepage: http://python-requests.org Priority: optional Section: python Filename: pool/main/r/requests/python3-requests_2.8.1-1~bpo8+1~nd90+1+nd17.04+1+nd17.10+1+nd18.04+1+nd18.10+1_all.deb Size: 68140 SHA256: 1633b482abb4c6d42b25a621b9342f7b1407e80471b707443889b81bdc685185 SHA1: 90da10525f1ec5d2a4dc14295b6af5c61000fad1 MD5sum: 9e310f6c1bd5d596ccc53a74f4bf6458 Description: elegant and simple HTTP library for Python3, built for human beings Requests allow you to send HTTP/1.1 requests. You can add headers, form data, multipart files, and parameters with simple Python dictionaries, and access the response data in the same way. It's powered by httplib and urllib3, but it does all the hard work and crazy hacks for you. . Features . - International Domains and URLs - Keep-Alive & Connection Pooling - Sessions with Cookie Persistence - Browser-style SSL Verification - Basic/Digest Authentication - Elegant Key/Value Cookies - Automatic Decompression - Unicode Response Bodies - Multipart File Uploads - Connection Timeouts . This package contains the Python 3 version of the library. Package: python3-sklearn-lib Source: scikit-learn Version: 0.20.0+dfsg-2~nd18.04+1+nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 14129 Depends: neurodebian-popularity-contest, libatlas3-base, libc6 (>= 2.4), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2), python3-numpy (>= 1:1.14.3), python3-numpy-abi9, python3 (<< 3.8), python3 (>= 3.6~) Provides: python3.6-sklearn-lib, python3.7-sklearn-lib Homepage: http://scikit-learn.sourceforge.net Priority: optional Section: python Filename: pool/main/s/scikit-learn/python3-sklearn-lib_0.20.0+dfsg-2~nd18.04+1+nd18.10+1_i386.deb Size: 1785444 SHA256: 15d378c9e0d9ea1b3850de8d8a5aa6b36815a847fce1c080610e737556bd62ec SHA1: 0aa2ec9921f5571d30e7ee393fb4d2d732392e19 MD5sum: 464f683ff4a8a0edc44844011dc49484 Description: low-level implementations and bindings for scikit-learn - Python 3 This is an add-on package for python-sklearn. It provides low-level implementations and custom Python bindings for the LIBSVM library. . This package contains the Python 3 version. Package: python3-wrapt Source: python-wrapt Version: 1.9.0-4~nd0~nd17.04+1+nd17.10+1+nd18.04+1+nd18.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 163 Depends: neurodebian-popularity-contest, python3-six, python3 (<< 3.8), python3 (>= 3.6~), python3:any, libc6 (>= 2.4) Homepage: https://github.com/GrahamDumpleton/wrapt Priority: optional Section: python Filename: pool/main/p/python-wrapt/python3-wrapt_1.9.0-4~nd0~nd17.04+1+nd17.10+1+nd18.04+1+nd18.10+1_i386.deb Size: 28740 SHA256: d6671b6d8f18f766c34774a7ab8cba8bdab71b1719a9ae9ad31bbd1f2036a6d1 SHA1: dbbde3f05a03848e50de6b76e3a08c99e2384df6 MD5sum: 4edc9e69d16a42569acf8ca73eb3931f Description: decorators, wrappers and monkey patching. - Python 3.x The aim of the wrapt module is to provide a transparent object proxy for Python, which can be used as the basis for the construction of function wrappers and decorator functions. . The wrapt module focuses very much on correctness. It therefore goes way beyond existing mechanisms such as functools.wraps() to ensure that decorators preserve introspectability, signatures, type checking abilities etc. The decorators that can be constructed using this module will work in far more scenarios than typical decorators and provide more predictable and consistent behaviour. . To ensure that the overhead is as minimal as possible, a C extension module is used for performance critical components. An automatic fallback to a pure Python implementation is also provided where a target system does not have a compiler to allow the C extension to be compiled. . This package contains the Python 3.x module. Package: rclone Version: 1.41-1~ndall0 Architecture: i386 Maintainer: Debian Go Packaging Team Installed-Size: 16874 Depends: libc6 (>= 2.3.6-6~) Built-Using: go-md2man (= 1.0.8+ds-1), golang-1.10 (= 1.10.3-1), golang-bazil-fuse (= 0.0~git20160811.0.371fbbd-2), golang-github-a8m-tree (= 0.0~git20171213.cf42b1e-1), golang-github-abbot-go-http-auth (= 0.0~git20150714.0.46b9627-2), golang-github-aws-aws-sdk-go (= 1.12.79+dfsg-1), golang-github-azure-azure-sdk-for-go (= 10.3.0~beta-1), golang-github-azure-go-autorest (= 8.3.1-1), golang-github-coreos-bbolt (= 1.3.1-coreos.5-1), golang-github-davecgh-go-spew (= 1.1.0-4), golang-github-dgrijalva-jwt-go-v3 (= 3.1.0-2), golang-github-djherbis-times (= 1.0.1+git20170215.d25002f-1), golang-github-dropbox-dropbox-sdk-go-unofficial (= 4.1.0-1), golang-github-go-ini-ini (= 1.32.0-2), golang-github-google-go-querystring (= 0.0~git20170111.0.53e6ce1-4), golang-github-jlaffaye-ftp (= 0.0~git20170707.0.a05056b-1), golang-github-jmespath-go-jmespath (= 0.2.2-2), golang-github-kardianos-osext (= 0.0~git20170510.0.ae77be6-5), golang-github-kr-fs (= 0.0~git20131111.0.2788f0d-2), golang-github-mattn-go-runewidth (= 0.0.2+git20170510.3.97311d9-1), golang-github-ncw-go-acd (= 0.0~git20171120.887eb06-1), golang-github-unknwon-goconfig (= 0.0~git20160828.0.5aa4f8c-3), golang-github-vividcortex-ewma (= 0.0~git20160822.20.c595cd8-3), golang-google-cloud (= 0.9.0-5), golang-goprotobuf (= 0.0~git20170808.0.1909bc2-2) Homepage: https://github.com/ncw/rclone Priority: optional Section: net Filename: pool/main/r/rclone/rclone_1.41-1~ndall0_i386.deb Size: 4618876 SHA256: f3d9fca60ef0cfd3221be8ef088af8a9fc3a2a2c99955034fe6b29a9e18eb42e SHA1: 50b47feb7ce2f1441e1a5cef84f91ef20d1e104f MD5sum: 8c73c00b1e80467960cb535af6d6e58f Description: rsync for commercial cloud storage Rclone is a program to sync files and directories between the local file system and a variety of commercial cloud storage providers: . - Google Drive - Amazon S3 - Openstack Swift / Rackspace cloud files / Memset Memstore - Dropbox - Google Cloud Storage - Amazon Drive - Microsoft One Drive - Hubic - Backblaze B2 - Yandex Disk Package: reprozip Version: 1.0.14-1~nd18.04+1+nd18.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 14 Depends: neurodebian-popularity-contest, python3:any (>= 3.3~), python3-reprozip Multi-Arch: foreign Homepage: https://www.reprozip.org Priority: optional Section: utils Filename: pool/main/r/reprozip/reprozip_1.0.14-1~nd18.04+1+nd18.10+1_all.deb Size: 3700 SHA256: 68f6e9f7f767d1395fbaca9fb642145438bd444a8763b3210fffd4c803094d74 SHA1: 3f117021d3fd58205697bf4f836dfc6db6e80f63 MD5sum: e60792bcb0a5aaa5e9344499ca9b7c3d Description: tool for reproducing scientific experiments (packer) ReproZip is a tool aimed at simplifying the process of creating reproducible experiments from command-line executions, a frequently-used common denominator in computational science. . It tracks operating system calls and creates a package that contains all the binaries, files and dependencies required to run a given command on the author’s computational environment (packing step). A reviewer can then extract the experiment in his environment to reproduce the results (unpacking step). . This package provides the ReproZip packer. Package: youtube-dl Version: 2021.12.17-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 5937 Depends: neurodebian-popularity-contest, python3-pkg-resources, python3:any Recommends: aria2 | wget | curl, ca-certificates, ffmpeg, mpv | mplayer, python3-pyxattr, rtmpdump, python3-pycryptodome Suggests: libfribidi-bin | bidiv, phantomjs Homepage: https://ytdl-org.github.io/youtube-dl/ Priority: optional Section: web Filename: pool/main/y/youtube-dl/youtube-dl_2021.12.17-1~nd110+1_all.deb Size: 1128692 SHA256: 75859d2f34a475fc0f199cd6d2b73e18c29cda44406530964890dcb790008eca SHA1: 09f85f2abc32eb5e9c2ccd6bfd1354ea332b6489 MD5sum: 6d04814be91bd9f85a7d3793ff2a2fb3 Description: downloader of videos from YouTube and other sites youtube-dl is a small command-line program to download videos from YouTube.com and other sites that don't provide direct links to the videos served. . youtube-dl allows the user, among other things, to choose a specific video quality to download (if available) or let the program automatically determine the best (or worst) quality video to grab. It supports downloading entire playlists and all videos from a given user. . Currently supported sites (or features of sites) are: . 1tv, 20min, 220.ro, 23video, 24video, 3qsdn, 3sat, 4tube, 56.com, 5min, 6play, 7plus, 8tracks, 91porn, 9c9media, 9gag, 9now.com.au, abc.net.au, abc.net.au:iview, abcnews, abcnews:video, abcotvs, abcotvs:clips, AcademicEarth:Course, acast, acast:channel, ADN, AdobeConnect, adobetv, adobetv:channel, adobetv:embed, adobetv:show, adobetv:video, AdultSwim, aenetworks, aenetworks:collection, aenetworks:show, afreecatv, AirMozilla, AliExpressLive, AlJazeera, Allocine, AlphaPorno, Amara, AMCNetworks, AmericasTestKitchen, AmericasTestKitchenSeason, anderetijden, AnimeOnDemand, Anvato, aol.com, APA, Aparat, AppleConnect, AppleDaily, ApplePodcasts, appletrailers, appletrailers:section, archive.org, ArcPublishing, ARD, ARD:mediathek, ARDBetaMediathek, Arkena, arte.sky.it, ArteTV, ArteTVEmbed, ArteTVPlaylist, AsianCrush, AsianCrushPlaylist, AtresPlayer, ATTTechChannel, ATVAt, AudiMedia, AudioBoom, audiomack, audiomack:album, AWAAN, awaan:live, awaan:season, awaan:video, AZMedien, BaiduVideo, Bandcamp, Bandcamp:album, Bandcamp:weekly, bangumi.bilibili.com, bbc, bbc.co.uk, bbc.co.uk:article, bbc.co.uk:iplayer:playlist, bbc.co.uk:playlist, BBVTV, Beatport, Beeg, BehindKink, Bellator, BellMedia, Bet, bfi:player, bfmtv, bfmtv:article, bfmtv:live, BibelTV, Bigflix, Bild, BiliBili, BilibiliAudio, BilibiliAudioAlbum, BiliBiliPlayer, BioBioChileTV, Biography, BIQLE, BitChute, BitChuteChannel, BleacherReport, BleacherReportCMS, blinkx, Bloomberg, BokeCC, BongaCams, BostonGlobe, Box, Bpb, BR, BravoTV, Break, brightcove:legacy, brightcove:new, BRMediathek, bt:article, bt:vestlendingen, BusinessInsider, BuzzFeed, BYUtv, Camdemy, CamdemyFolder, CamModels, CamTube, CamWithHer, canalc2.tv, Canalplus, Canvas, CanvasEen, CarambaTV, CarambaTVPage, CartoonNetwork, cbc.ca, cbc.ca:olympics, cbc.ca:player, cbc.ca:watch, cbc.ca:watch:video, CBS, CBSInteractive, CBSLocal, CBSLocalArticle, cbsnews, cbsnews:embed, cbsnews:livevideo, CBSSports, CCMA, CCTV, CDA, CeskaTelevize, CeskaTelevizePorady, channel9, CharlieRose, Chaturbate, Chilloutzone, chirbit, chirbit:profile, cielotv.it, Cinchcast, Cinemax, CiscoLiveSearch, CiscoLiveSession, CJSW, cliphunter, Clippit, ClipRs, Clipsyndicate, CloserToTruth, CloudflareStream, Cloudy, Clubic, Clyp, cmt.com, CNBC, CNBCVideo, CNN, CNNArticle, CNNBlogs, ComedyCentral, ComedyCentralTV, CommonMistakes, CondeNast, CONtv, Corus, Coub, Cracked, Crackle, CrooksAndLiars, crunchyroll, crunchyroll:playlist, CSpan, CtsNews, CTV, CTVNews, cu.ntv.co.jp, Culturebox, CultureUnplugged, curiositystream, curiositystream:collection, CWTV, DailyMail, dailymotion, dailymotion:playlist, dailymotion:user, daum.net, daum.net:clip, daum.net:playlist, daum.net:user, DBTV, DctpTv, DeezerPlaylist, defense.gouv.fr, democracynow, DHM, Digg, DigitallySpeaking, Digiteka, Discovery, DiscoveryGo, DiscoveryGoPlaylist, DiscoveryNetworksDe, DiscoveryVR, Disney, dlive:stream, dlive:vod, Dotsub, DouyuShow, DouyuTV, DPlay, DRBonanza, Dropbox, DrTuber, drtv, drtv:live, DTube, Dumpert, dvtv, dw, dw:article, EaglePlatform, EbaumsWorld, EchoMsk, egghead:course, egghead:lesson, ehftv, eHow, EinsUndEinsTV, Einthusan, eitb.tv, EllenTube, EllenTubePlaylist, EllenTubeVideo, ElPais, Embedly, EMPFlix, Engadget, Eporner, EroProfile, Escapist, ESPN, ESPNArticle, EsriVideo, Europa, EWETV, ExpoTV, Expressen, ExtremeTube, EyedoTV, facebook, FacebookPluginsVideo, faz.net, fc2, fc2:embed, Fczenit, filmon, filmon:channel, Filmweb, FiveThirtyEight, FiveTV, Flickr, Folketinget, FootyRoom, Formula1, FOX, FOX9, FOX9News, Foxgay, foxnews, foxnews:article, FoxSports, france2.fr:generation-what, FranceCulture, FranceInter, FranceTV, FranceTVEmbed, francetvinfo.fr, FranceTVJeunesse, FranceTVSite, Freesound, freespeech.org, FreshLive, FrontendMasters, FrontendMastersCourse, FrontendMastersLesson, FujiTVFODPlus7, Funimation, Funk, Fusion, Fux, Gaia, GameInformer, GameSpot, GameStar, Gaskrank, Gazeta, GDCVault, generic, Gfycat, GiantBomb, Giga, GlattvisionTV, Glide, Globo, GloboArticle, Go, GodTube, Golem, google:podcasts, google:podcasts:feed, GoogleDrive, Goshgay, GPUTechConf, Groupon, hbo, HearThisAt, Heise, HellPorno, Helsinki, HentaiStigma, hetklokhuis, hgtv.com:show, HiDive, HistoricFilms, history:player, history:topic, hitbox, hitbox:live, HitRecord, hketv, HornBunny, HotNewHipHop, hotstar, hotstar:playlist, Howcast, HowStuffWorks, HRTi, HRTiPlaylist, Huajiao, HuffPost, Hungama, HungamaSong, Hypem, ign.com, IGNArticle, IGNVideo, IHeartRadio, iheartradio:podcast, imdb, imdb:list, Imgur, imgur:album, imgur:gallery, Ina, Inc, IndavideoEmbed, InfoQ, Instagram, instagram:tag, instagram:user, Internazionale, InternetVideoArchive, IPrima, iqiyi, Ir90Tv, ITTF, ITV, ITVBTCC, ivi, ivi:compilation, ivideon, Iwara, Izlesene, Jamendo, JamendoAlbum, JeuxVideo, Joj, Jove, JWPlatform, Kakao, Kaltura, Kankan, Karaoketv, KarriereVideos, Katsomo, KeezMovies, Ketnet, khanacademy, khanacademy:unit, KickStarter, KinjaEmbed, KinoPoisk, KonserthusetPlay, KrasView, Ku6, KUSI, kuwo:album, kuwo:category, kuwo:chart, kuwo:mv, kuwo:singer, kuwo:song, la7.it, laola1tv, laola1tv:embed, lbry, lbry:channel, LCI, Lcp, LcpPlay, Le, Lecture2Go, Lecturio, LecturioCourse, LecturioDeCourse, LEGO, Lemonde, Lenta, LePlaylist, LetvCloud, Libsyn, life, life:embed, limelight, limelight:channel, limelight:channel_list, LineTV, linkedin:learning, linkedin:learning:course, LinuxAcademy, LiTV, LiveJournal, LiveLeak, LiveLeakEmbed, livestream, livestream:original, livestream:shortener, LnkGo, loc, LocalNews8, LoveHomePorn, lrt.lt, lynda, lynda:course, m6, mailru, mailru:music, mailru:music:search, MallTV, mangomolo:live, mangomolo:video, ManyVids, Markiza, MarkizaPage, massengeschmack.tv, MatchTV, MDR, MedalTV, media.ccc.de, media.ccc.de:lists, Medialaan, Mediaset, Mediasite, MediasiteCatalog, MediasiteNamedCatalog, Medici, megaphone.fm, Meipai, MelonVOD, META, metacafe, Metacritic, mewatch, Mgoon, MGTV, MiaoPai, minds, minds:channel, minds:group, MinistryGrid, Minoto, miomio.tv, MiTele, mixcloud, mixcloud:playlist, mixcloud:user, MLB, Mms, Mnet, MNetTV, MoeVideo, Mofosex, MofosexEmbed, Mojvideo, Morningstar, Motherless, MotherlessGroup, Motorsport, MovieClips, MovieFap, Moviezine, MovingImage, MSN, mtg, mtv, mtv.de, mtv:video, mtvjapan, mtvservices:embedded, MTVUutisetArticle, MuenchenTV, mva, mva:course, Mwave, MwaveMeetGreet, MyChannels, MySpace, MySpace:album, MySpass, Myvi, MyVidster, MyviEmbed, MyVisionTV, n-tv.de, natgeo:video, NationalGeographicTV, Naver, NBA, nba:watch, nba:watch:collection, NBAChannel, NBAEmbed, NBAWatchEmbed, NBC, NBCNews, nbcolympics, nbcolympics:stream, NBCSports, NBCSportsStream, NBCSportsVPlayer, ndr, ndr:embed, ndr:embed:base, NDTV, NerdCubedFeed, netease:album, netease:djradio, netease:mv, netease:playlist, netease:program, netease:singer, netease:song, NetPlus, Netzkino, Newgrounds, NewgroundsPlaylist, Newstube, NextMedia, NextMediaActionNews, NextTV, Nexx, NexxEmbed, nfl.com (CURRENTLY BROKEN), nfl.com:article (CURRENTLY BROKEN), NhkVod, NhkVodProgram, nhl.com, nick.com, nick.de, nickelodeon:br, nickelodeonru, nicknight, niconico, NiconicoPlaylist, Nintendo, njoy, njoy:embed, NJPWWorld, NobelPrize, NonkTube, Noovo, Normalboots, NosVideo, Nova, NovaEmbed, nowness, nowness:playlist, nowness:series, Noz, npo, npo.nl:live, npo.nl:radio, npo.nl:radio:fragment, Npr, NRK, NRKPlaylist, NRKRadioPodkast, NRKSkole, NRKTV, NRKTVDirekte, NRKTVEpisode, NRKTVEpisodes, NRKTVSeason, NRKTVSeries, NRLTV, ntv.ru, Nuvid, NYTimes, NYTimesArticle, NYTimesCooking, NZZ, ocw.mit.edu, OdaTV, Odnoklassniki, OktoberfestTV, OnDemandKorea, onet.pl, onet.tv, onet.tv:channel, OnetMVP, OnionStudios, Ooyala, OoyalaExternal, OraTV, orf:burgenland, orf:fm4, orf:fm4:story, orf:iptv, orf:kaernten, orf:noe, orf:oberoesterreich, orf:oe1, orf:oe3, orf:salzburg, orf:steiermark, orf:tirol, orf:tvthek, orf:vorarlberg, orf:wien, OsnatelTV, OutsideTV, PacktPub, PacktPubCourse, 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