Package: con-duct Version: 0.8.0-1~nd24.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 79 Depends: neurodebian-popularity-contest, procps, python3:any Recommends: python3-matplotlib Homepage: https://github.com/con/duct/ Priority: optional Section: python Filename: pool/main/c/con-duct/con-duct_0.8.0-1~nd24.04+1_all.deb Size: 18776 SHA256: d64309cc92c354d32130c5d03a955693ee519cf2c2677201deafa27416b76e77 SHA1: 69c6179eb975bec81f6e4a29e420aba9b5508185 MD5sum: b2ae4c470daef0652333ca2dbb5b95b3 Description: lightweight wrapper to collect execution data for a command con-duct provides a duct command which is a lightweight wrapper that collects execution data for an arbitrary command. Execution data includes execution time, system information, and resource usage statistics of the command and all its child processes. It is intended to simplify the problem of recording the resources necessary to execute a command, particularly in an HPC environment. . Resource usage is determined by polling (at a sample-interval). During execution, duct produces a JSON lines file with one data point recorded for each report (at a report-interval). . This package installs the Python library and command-line tools. Package: connectome-workbench Version: 2.0.1-1~nd24.04+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 67028 Depends: neurodebian-popularity-contest, libc6 (>= 2.38), libftgl2 (>= 2.4.0), libgcc-s1 (>= 3.0), libgl1, libglu1-mesa | libglu1, libgomp1 (>= 6), libosmesa6 (>= 10.2~), libqt5core5t64 (>= 5.15.1), libqt5gui5t64 (>= 5.14.1) | libqt5gui5-gles (>= 5.14.1), libqt5network5t64 (>= 5.15.1), libqt5printsupport5t64 (>= 5.0.2), libqt5widgets5t64 (>= 5.14.1), libqt5xml5t64 (>= 5.1.0), libstdc++6 (>= 13.1), zlib1g (>= 1:1.2.3.4) Recommends: caret Suggests: ffmpeg Homepage: http://www.nitrc.org/projects/workbench/ Priority: optional Section: science Filename: pool/main/c/connectome-workbench/connectome-workbench_2.0.1-1~nd24.04+1_amd64.deb Size: 28742344 SHA256: 3916625ce34930a893c803f098d0ed86c8f543dfeb10a58ed5418fef983f257f SHA1: e2003df69e8c6aac4ef1e06f7e89db915bc6249b MD5sum: 4bc8af884900c17bb2f5a675ebad8850 Description: brain visualization, analysis and discovery tool Connectome Workbench is a brain visualization, analysis and discovery tool for fMRI and dMRI brain imaging data, including functional and structural connectivity data generated by the Human Connectome Project. . Package includes wb_command, a command-line program for performing a variety of analytical tasks for volume, surface, and CIFTI grayordinates data. Package: connectome-workbench-dbg Source: connectome-workbench Version: 2.0.1-1~nd24.04+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 362166 Depends: neurodebian-popularity-contest, connectome-workbench (= 2.0.1-1~nd24.04+1) Homepage: http://www.nitrc.org/projects/workbench/ Priority: optional Section: debug Filename: pool/main/c/connectome-workbench/connectome-workbench-dbg_2.0.1-1~nd24.04+1_amd64.deb Size: 359416234 SHA256: dd0682a5d7e0839dc173ce797f71925910fc690c03eca9f1d7cb42ef080f6d1b SHA1: 4e4f02a8afccab6db16262b10f821d216aad7c83 MD5sum: 20f465e47c7b5d581ae1ed262dd514dd Description: brain visualization, analysis and discovery tool -- debug symbols Connectome Workbench is a brain visualization, analysis and discovery tool for fMRI and dMRI brain imaging data, including functional and structural connectivity data generated by the Human Connectome Project. . Package includes wb_command, a command-line program for performing a variety of analytical tasks for volume, surface, and CIFTI grayordinates data. . This package contains debug symbols for the binaries. Build-Ids: 02b2d5231d3dfe87ce80e012fe6017efb1e899dd 54399395f2d9f87a2129ced614f2af75e995da05 Package: datalad Version: 1.1.3-1~nd24.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 229 Depends: neurodebian-popularity-contest, python3-datalad (= 1.1.3-1~nd24.04+1), python3-argcomplete (>= 1.12.3), python3:any Suggests: datalad-container Homepage: https://datalad.org Priority: optional Section: science Filename: pool/main/d/datalad/datalad_1.1.3-1~nd24.04+1_all.deb Size: 189834 SHA256: cb3fa9126e972fb4950b35c5432bd0819f8061da1ae83014d1b6861eb3dfc32b SHA1: 7b8d0f784768dc1e124d01dd6d80d3121f9ac76e MD5sum: fdb69e8c996a03285a5bea724aff2a28 Description: data files management and distribution platform DataLad is a data management and distribution platform providing access to a wide range of data resources already available online. Using git-annex as its backend for data logistics it provides following facilities built-in or available through additional extensions . - command line and Python interfaces for manipulation of collections of datasets (install, uninstall, update, publish, save, etc.) and separate files/directories (add, get) Package: davfs2 Version: 1.7.0-1~nd24.04+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 374 Depends: neurodebian-popularity-contest, libc6 (>= 2.38), libneon27t64, debconf (>= 0.5) | debconf-2.0, adduser Homepage: https://savannah.nongnu.org/projects/davfs2 Priority: optional Section: utils Filename: pool/main/d/davfs2/davfs2_1.7.0-1~nd24.04+1_amd64.deb Size: 168034 SHA256: 0ee1303d0bc2b415ddd311bad1c0d393f2b78e02d985e9dfbd6af963b9ea65e2 SHA1: 58d7379c49680b19a2b31c03ff810782d1fedd0c MD5sum: c0de21c1e70f55ea47e238809670dbd1 Description: mount a WebDAV resource as a regular file system Web Distributed Authoring and Versioning (WebDAV), an extension to the HTTP-protocol, allows authoring of resources on a remote web server. davfs2 provides the ability to access such resources like a typical filesystem, allowing for use by standard applications with no built-in support for WebDAV. . davfs2 is designed to fully integrate into the filesystem semantics of Unix-like systems (mount, umount, et c.). davfs2 makes mounting by unprivileged users as easy and secure as possible. . davfs2 does extensive caching to make the file system responsive, to avoid unnecessary network traffic and to prevent data loss, and to cope for slow or unreliable connections. . davfs2 will work with most WebDAV servers needing little or no configuration. Package: git-annex-standalone Source: git-annex Version: 10.20241031-1~ndall+1 Architecture: amd64 Maintainer: Richard Hartmann Installed-Size: 166312 Depends: git, netbase, openssh-client Recommends: lsof, gnupg, bind9-host, yt-dlp, git-remote-gcrypt (>= 0.20130908-6), nocache, aria2 Suggests: xdot, bup, adb, tor, magic-wormhole, tahoe-lafs, libnss-mdns, uftp Conflicts: git-annex Breaks: datalad (<= 0.12.3~) Provides: git-annex Homepage: http://git-annex.branchable.com/ Priority: optional Section: utils Filename: pool/main/g/git-annex/git-annex-standalone_10.20241031-1~ndall+1_amd64.deb Size: 53000596 SHA256: 8080805f2216a629460f3b65242f5562fd0f1ac34403ca0713bb0a1e132ea172 SHA1: 01eba33bc328a2698a427d7006259343f31b4a5a MD5sum: b572f29657b3bba8053a3ec047ec2ed5 Description: manage files with git, without checking their contents into git -- standalone build git-annex allows managing large files with git, without storing the file contents in git. It can sync, backup, and archive your data, offline and online. Checksums and encryption keep your data safe and secure. Bring the power and distributed nature of git to bear on your large files with git-annex. . It can store large files in many places, from local hard drives, to a large number of cloud storage services, including S3, WebDAV, and rsync, with dozens of cloud storage providers usable via plugins. Files can be stored encrypted with gpg, so that the cloud storage provider cannot see your data. git-annex keeps track of where each file is stored, so it knows how many copies are available, and has many facilities to ensure your data is preserved. . git-annex can also be used to keep a folder in sync between computers, noticing when files are changed, and automatically committing them to git and transferring them to other computers. The git-annex webapp makes it easy to set up and use git-annex this way. . This package provides a standalone bundle build of git-annex, which should be installable on any more or less recent Debian or Ubuntu release. Package: octave-psychtoolbox-3 Source: psychtoolbox-3 Version: 3.0.19.14.dfsg1-1~nd24.04+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 6399 Depends: neurodebian-popularity-contest, octave (>= 8.4.0), libapriltag3t64 (>= 3.1.7), libasound2t64 (>= 1.0.16), libc6 (>= 2.38), libdc1394-25 (>= 2.2.6), libfreenect0.5t64 (>= 1:0.1.1), libgcc-s1 (>= 3.3.1), libgl1, libglib2.0-0t64 (>= 2.12.0), libglu1-mesa | libglu1, libglut3.12 (>= 3.4.0), libgomp1 (>= 4.9), libgstreamer-plugins-base1.0-0 (>= 1.8~), libgstreamer1.0-0 (>= 1.4.0), libopenal1 (>= 1.14), libopenhmd0 (>= 0.3.0), libopenxr-loader1 (>= 1.0.3), libpciaccess0 (>= 0.10.7), libportaudio2 (>= 19+svn20101113), libstdc++6 (>= 11), libusb-1.0-0 (>= 2:1.0.22), libvulkan1 (>= 1.2.131.2), libx11-6 (>= 2:1.2.99.901), libx11-xcb1 (>= 2:1.8.7), libxcb-dri3-0, libxcb-present0, libxcb1 (>= 1.9.2), libxcomposite1 (>= 1:0.4.5), libxext6, libxfixes3 (>= 1:5.0), libxi6 (>= 2:1.2.99.4), libxrandr2 (>= 2:1.4.0), libxxf86vm1, psychtoolbox-3-common (= 3.0.19.14.dfsg1-1~nd24.04+1), psychtoolbox-3-lib (= 3.0.19.14.dfsg1-1~nd24.04+1) Recommends: octave-image, octave-optim, octave-signal, octave-statistics, octave-pkg-dev Provides: psychtoolbox, psychtoolbox-3 Homepage: http://psychtoolbox.org Priority: optional Section: science Filename: pool/main/p/psychtoolbox-3/octave-psychtoolbox-3_3.0.19.14.dfsg1-1~nd24.04+1_amd64.deb Size: 1290352 SHA256: c81df31e56d40f5ca8a1e38fc458b9aa8ce1ba21d90cb2b8a85ac6252c577ced SHA1: 5b2a74b95c30bbac7a88c429cb374d9ccd1f8eaf MD5sum: de7306dd6cbbcecdbf2c353cf9228c7a Description: toolbox for vision research -- Octave bindings Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . See also http://www.psychtoolbox.org/UsingPsychtoolboxOnUbuntu for additional information about systems tune-up and initial configuration. . This package contains bindings for Octave. Package: psychtoolbox-3-common Source: psychtoolbox-3 Version: 3.0.19.14.dfsg1-1~nd24.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 57985 Depends: neurodebian-popularity-contest Recommends: alsa-utils, apriltag, gamemode Suggests: gnuplot Homepage: http://psychtoolbox.org Priority: optional Section: science Filename: pool/main/p/psychtoolbox-3/psychtoolbox-3-common_3.0.19.14.dfsg1-1~nd24.04+1_all.deb Size: 26769004 SHA256: 757653da3af4377de7852bd7cd91308cf6e21e2560bb4281a54892f2dc9b2cdf SHA1: 50ff08b4effcb56dcf207d428c09b0977dbaeee2 MD5sum: 03a8ea4ffe57e012e82553c2482f1c4a Description: toolbox for vision research -- arch/interpreter independent part Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains architecture independent files (such as .m scripts) Package: psychtoolbox-3-dbg Source: psychtoolbox-3 Version: 3.0.19.14.dfsg1-1~nd24.04+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 247 Depends: neurodebian-popularity-contest, octave-psychtoolbox-3 (= 3.0.19.14.dfsg1-1~nd24.04+1) Homepage: http://psychtoolbox.org Priority: optional Section: debug Filename: pool/main/p/psychtoolbox-3/psychtoolbox-3-dbg_3.0.19.14.dfsg1-1~nd24.04+1_amd64.deb Size: 174300 SHA256: 646c49c205ce6c6b6c80bedd0dc877f8881bf0c941826a84360af6dd836938f0 SHA1: b30458aefab05aa050c8833623d68e9f0912737d MD5sum: f690cd162f936af7e8ce1bc9df13236d Description: toolbox for vision research -- debug symbols for binaries Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . To ease debugging and troubleshooting this package contains debug symbols for Octave bindings and other binaries. Build-Ids: 1d1a0b471753525b2fc6762d76dfc55257d01400 716510a99f64a49237a614bfc94ecfe9d7975891 Package: psychtoolbox-3-lib Source: psychtoolbox-3 Version: 3.0.19.14.dfsg1-1~nd24.04+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 200 Depends: neurodebian-popularity-contest, libc6 (>= 2.38), libfontconfig1 (>= 2.12.6), libfreetype6 (>= 2.2.1), libgcc-s1 (>= 3.0), libgl1, libglu1-mesa | libglu1, libstdc++6 (>= 13.1) Recommends: gstreamer1.0-plugins-base (>= 1.8~), gstreamer1.0-plugins-good, gstreamer1.0-plugins-bad, gstreamer1.0-plugins-ugly, gstreamer1.0-libav, libopenxr-loader1, libvulkan1 Suggests: libopenxr1-monado Homepage: http://psychtoolbox.org Priority: optional Section: science Filename: pool/main/p/psychtoolbox-3/psychtoolbox-3-lib_3.0.19.14.dfsg1-1~nd24.04+1_amd64.deb Size: 74886 SHA256: a255a637a5581c565818dde896805bae591da4db01df25e1ab9da31eca784b18 SHA1: 831b9f9b79bea5fcf7383ac8675613b61562e481 MD5sum: 89bec98a174574a4f996e3d29ab2c6ca Description: toolbox for vision research -- arch-specific parts Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains additional binaries (tools/dynamic libraries) used by both Octave and Matlab frontends. Package: python3-datalad Source: datalad Version: 1.1.3-1~nd24.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4338 Depends: neurodebian-popularity-contest, git-annex (>= 8.20200309~) | git-annex-standalone (>= 8.20200309~), patool, 7zip (>= 23.01+dfsg-4~) | p7zip-full, python3 (>= 3.7), python3-annexremote, python3-distro, python3-fasteners (>= 0.14~), python3-gitlab, python3-humanize, python3 (>= 3.10) | python3-importlib-metadata (>= 3.6~), python3 (>= 3.9) | python3-importlib-resources (>= 3.0~), python3-iso8601, python3-keyring, python3-keyrings.alt | python3-keyring (<= 8), python3-msgpack, python3-platformdirs, python3-requests (>= 1.2), python3-secretstorage, python3-typing-extensions (>= 3.10.0.2~), python3-tqdm (>= 4.32.0), python3-chardet, python3-packaging, python3:any Recommends: python3-boto3, python3-html5lib, python3-httpretty, python3-lzma, python3-pytest, python3-pyperclip, python3-requests-ftp, python3-vcr Suggests: python3-duecredit, datalad-container, python3-bs4, python3-numpy Breaks: datalad-container (<< 1.1.2) Homepage: https://datalad.org Priority: optional Section: python Filename: pool/main/d/datalad/python3-datalad_1.1.3-1~nd24.04+1_all.deb Size: 898944 SHA256: 928329086e46dcdeb56f76fc80097d00d257fcabecaddcd4f78fa36cad9044a3 SHA1: e9f42572845bcbe2a454e819c81f683d38ae8a84 MD5sum: e1731cf81d2cc50ad53fe4c048719a24 Description: data files management and distribution platform DataLad is a data management and distribution platform providing access to a wide range of data resources already available online. Using git-annex as its backend for data logistics it provides following facilities built-in or available through additional extensions . - command line and Python interfaces for manipulation of collections of datasets (install, uninstall, update, publish, save, etc.) and separate files/directories (add, get) . This package installs the module for Python 3, and Recommends install all dependencies necessary for searching and managing datasets, publishing, and testing. If you need base functionality, install without Recommends. Package: python3-tqdm Source: tqdm Version: 4.66.5-1~nd24.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 313 Depends: neurodebian-popularity-contest, python3:any Homepage: https://tqdm.github.io Priority: optional Section: python Filename: pool/main/t/tqdm/python3-tqdm_4.66.5-1~nd24.04+1_all.deb Size: 91578 SHA256: 781b9b414333d45e96d659612971aa7731c629ecae2ce6129da48a79c1323b05 SHA1: 6e7e75ce2780271db7022fa57b082a017bdb1c87 MD5sum: b23d1f8ca1bc4b1d2256d5a595bfa66d Description: fast, extensible progress bar for Python 3 and CLI tool tqdm (read taqadum, تقدّم) means “progress” in Arabic. tqdm instantly makes your loops show a smart progress meter, just by wrapping any iterable with "tqdm(iterable)". . This package contains the Python 3 version of tqdm and its command-line tool.