Package: afni-atlases Source: afni-data Version: 0.20180120-1.1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 109419 Homepage: http://afni.nimh.nih.gov Priority: extra Section: science Filename: pool/main/a/afni-data/afni-atlases_0.20180120-1.1_all.deb Size: 98215048 SHA256: b7b30ce4345671d92cb08f939b76de42f81a6839abe3d47dba1db0620fe64e0c SHA1: 792d6506cc866acfa54fc71475f823e686f169f7 MD5sum: deaddf5e6992face9b5edeb62644187c Description: standard space brain atlases for AFNI AFNI is an environment for processing and displaying functional MRI data. It provides a complete analysis toolchain, including 3D cortical surface models, and mapping of volumetric data (SUMA). . This package provide AFNI's standard space brain templates in HEAD/BRIK format. Package: bats Version: 0.4.0-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 24 Depends: neurodebian-popularity-contest Homepage: https://github.com/sstephenson/bats Priority: optional Section: shells Filename: pool/main/b/bats/bats_0.4.0-1~nd12.04+1_all.deb Size: 15368 SHA256: 844009c86869cd682ae3d6df0d220125f3b1c793e3c05af5c63df7db2793633a SHA1: 9969ac81efd168ab4721fe088a729939471385a0 MD5sum: d406fa9c7617cb1c93611410acb268ed Description: bash automated testing system Bats is a TAP-compliant testing framework for Bash. It provides a simple way to verify that the UNIX programs you write behave as expected. Bats is most useful when testing software written in Bash, but you can use it to test any UNIX program. Package: btrbk Version: 0.26.1-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 360 Depends: neurodebian-popularity-contest, perl, btrfs-progs (>= 3.18.2) | btrfs-tools (>= 3.18.2) Recommends: openssh-client, pv, mbuffer Suggests: openssl Homepage: https://digint.ch/btrbk/ Priority: optional Section: utils Filename: pool/main/b/btrbk/btrbk_0.26.1-1~nd12.04+1_all.deb Size: 391948 SHA256: e5737e5ef85367d5085ffe3264dc877d62f0cb61bd37acc3c0577db0b8b00d3c SHA1: 36fa2f9950f345cb6de3ea07aa787d4c6b7e1400 MD5sum: 54c2954f9b3ce9dcd5cf42b181e61a16 Description: backup tool for btrfs subvolumes Backup tool for btrfs subvolumes, using a configuration file, allows creation of backups from multiple sources to multiple destinations, with ssh and flexible retention policy support (hourly, daily, weekly, monthly). Package: condor Version: 8.4.9~dfsg.1-2~nd12.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 47 Depends: neurodebian-popularity-contest, htcondor Homepage: http://research.cs.wisc.edu/htcondor Priority: extra Section: oldlibs Filename: pool/main/c/condor/condor_8.4.9~dfsg.1-2~nd12.04+1_all.deb Size: 17012 SHA256: 46f3d68a49b2c88be903a703400b532ad8f7d9f5b8a0478517f6be415284cf9c SHA1: 40b799a458af038cae1af6c9821db1daee0903d8 MD5sum: 2743f8ee529d04cd6dd195cca6d55564 Description: transitional dummy package This package aids upgrades of existing Condor installations to the new project and package name "HTCondor". The package is empty and it can safely be removed. Package: condor-dbg Source: condor Version: 8.4.9~dfsg.1-2~nd12.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 47 Depends: neurodebian-popularity-contest, htcondor-dbg Homepage: http://research.cs.wisc.edu/htcondor Priority: extra Section: oldlibs Filename: pool/main/c/condor/condor-dbg_8.4.9~dfsg.1-2~nd12.04+1_all.deb Size: 17020 SHA256: 48ba81b4046156c2670a4e41bc6a650855ef2f382d8ea95ec9042474f02e76ad SHA1: e6d95cc298cdcd5dba3134644b6050ed3477365e MD5sum: 35fd86ef31fd03868cda5a1783489239 Description: transitional dummy package This package aids upgrades of existing Condor installations to the new project and package name "HTCondor". The package is empty and it can safely be removed. Package: condor-dev Source: condor Version: 8.4.9~dfsg.1-2~nd12.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 47 Depends: neurodebian-popularity-contest, htcondor-dev Homepage: http://research.cs.wisc.edu/htcondor Priority: extra Section: oldlibs Filename: pool/main/c/condor/condor-dev_8.4.9~dfsg.1-2~nd12.04+1_all.deb Size: 17018 SHA256: 0c95ba66ced0dc5f960fa9fbf76ddac884ddc17afc0a82075d0a883b5c7f24fc SHA1: 8991e8d59f6ad166f08b002980c34887e8427ffa MD5sum: ef8cc9d7f6cec7fcecf9b9fff3ef5bbc Description: transitional dummy package This package aids upgrades of existing Condor installations to the new project and package name "HTCondor". The package is empty and it can safely be removed. Package: condor-doc Source: condor Version: 8.4.9~dfsg.1-2~nd12.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 47 Depends: neurodebian-popularity-contest, htcondor-doc Homepage: http://research.cs.wisc.edu/htcondor Priority: extra Section: oldlibs Filename: pool/main/c/condor/condor-doc_8.4.9~dfsg.1-2~nd12.04+1_all.deb Size: 17018 SHA256: fbac182003075f12f127c8df7e7322dbef1b14ec59ceb1540cb9035b15ae46f7 SHA1: 7957eea5c00e77f43b02b65bec150e061fe60319 MD5sum: 50489b273340c01792438a712c4323f4 Description: transitional dummy package This package aids upgrades of existing Condor installations to the new project and package name "HTCondor". The package is empty and it can safely be removed. Package: connectomeviewer Version: 2.1.0-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1576 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0), python-cfflib (>= 2.0.5), python-networkx (>= 1.4), python-nibabel, python-numpy (>= 1.3.0), python-scipy, python-chaco, mayavi2 (>= 4.0.0), ipython Recommends: python-nipype, python-dipy, python-matplotlib, python-qscintilla2 Suggests: nipy-suite Homepage: http://www.connectomeviewer.org Priority: extra Section: python Filename: pool/main/c/connectomeviewer/connectomeviewer_2.1.0-1~nd12.04+1_all.deb Size: 1355528 SHA256: 8255392e769af2ca1b745f6707a441213b408db7ae6a12c299698c495f618f0b SHA1: 1834b0270b864861f5c97b2a7ecdfabb7cc1ae14 MD5sum: 09125f910fb0ecec7fd33d65efb0c75f Description: Interactive Analysis and Visualization for MR Connectomics The Connectome Viewer is a extensible, scriptable, pythonic research environment for visualization and (network) analysis in neuroimaging and connectomics. . Employing the Connectome File Format, diverse data types such as networks, surfaces, volumes, tracks and metadata are handled and integrated. The Connectome Viewer is part of the MR Connectome Toolkit. Package: coop-computing-tools-doc Source: cctools Version: 3.4.2-1~nd11.10+1+nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2319 Depends: neurodebian-popularity-contest, libjs-jquery Homepage: http://nd.edu/~ccl/software/ Priority: extra Section: doc Filename: pool/main/c/cctools/coop-computing-tools-doc_3.4.2-1~nd11.10+1+nd12.04+1_all.deb Size: 310964 SHA256: a39fa9bc2251d5a045a6126278b1e772f41883e8ef1dd939b2b2c903df0fe40a SHA1: 79255768567dff8808dd954c9e64dc6c99dfd89c MD5sum: 3b540998ed6b8eda89421dd11cd61d6a Description: documentation for coop-computing-tools These tools are a collection of software that help users to share resources in a complex, heterogeneous, and unreliable computing environment. . This package provides the documentation (manual and API reference) in HTML format. Package: datalad Version: 0.17.5-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 224 Depends: neurodebian-popularity-contest, python3-datalad (= 0.17.5-1~nd+1), python3-argcomplete (>= 1.12.3), python3:any Suggests: datalad-container, datalad-crawler, datalad-neuroimaging Homepage: https://datalad.org Priority: optional Section: science Filename: pool/main/d/datalad/datalad_0.17.5-1~nd+1_all.deb Size: 187092 SHA256: dcfab5ab31ab85c685b4439648c3095efb236b34c92eb2f870fc1376dd0dbab1 SHA1: e8a088bc96e73f10444588eede93689410943c07 MD5sum: a4020bc221d05979fe1738d432660717 Description: data files management and distribution platform DataLad is a data management and distribution platform providing access to a wide range of data resources already available online. Using git-annex as its backend for data logistics it provides following facilities built-in or available through additional extensions . - command line and Python interfaces for manipulation of collections of datasets (install, uninstall, update, publish, save, etc.) and separate files/directories (add, get) - extract, aggregate, and search through various sources of metadata (xmp, EXIF, etc; install datalad-neuroimaging for DICOM, BIDS, NIfTI support) - crawl web sites to automatically prepare and update git-annex repositories with content from online websites, S3, etc (install datalad-crawler) Package: debian-handbook Version: 6.0+20120509~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 23215 Depends: neurodebian-popularity-contest Homepage: http://debian-handbook.info Priority: optional Section: doc Filename: pool/main/d/debian-handbook/debian-handbook_6.0+20120509~nd+1_all.deb Size: 21998670 SHA256: b33f038d8363175473cc056a5f98fc7af52386a466b45d4b2e42d2f25233a3ed SHA1: 7a0b369b4548a3f4fb61aa1ef9efa2ddf2b319e2 MD5sum: 3e3d2cf990fcc5ed1ed6bdbfb5c1c3dd Description: reference book for Debian users and system administrators Accessible to all, the Debian Administrator's Handbook teaches the essentials to anyone who wants to become an effective and independent Debian GNU/Linux administrator. . It covers all the topics that a competent Linux administrator should master, from the installation and the update of the system, up to the creation of packages and the compilation of the kernel, but also monitoring, backup and migration, without forgetting advanced topics like SELinux setup to secure services, automated installations, or virtualization with Xen, KVM or LXC. . The Debian Administrator's Handbook has been written by two Debian developers — Raphaël Hertzog and Roland Mas. . This package contains the English book covering Debian 6.0 “Squeeze”. Package: dh-octave Version: 0.6.0~bpo9+1+nd1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 100 Depends: neurodebian-popularity-contest, liboctave-dev (>= 4.2.1-5), debhelper (>= 11), cme, libparse-debcontrol-perl, libmime-tools-perl, dh-octave-autopkgtest, perl Priority: optional Section: devel Filename: pool/main/d/dh-octave/dh-octave_0.6.0~bpo9+1+nd1~nd12.04+1_all.deb Size: 85640 SHA256: 49f8af960d3b93b1acdb7186a315e3e67785bacb1f98cee70c5cb4a05a309e34 SHA1: af7f7c46b2ae928702393d4e405ae3d143c0bb10 MD5sum: 1f53b1b09dacfb80bb021c5be8526ba9 Description: Debhelper-based infrastructure for building Octave add-on packages Since version 3.0 of Octave (a numerical computation software), add-ons can be installed through the pkg.m system. This package provides the infrastructure for packaging such add-ons for Debian, based on debhelper. It replaces the deprecated octave-pkg-dev package. This package contains debhelper-like scripts for building, checking and cleaning the add-on package as well as for generating the substitution variables in debian/control. . This package is intended to be used by the Debian Octave Group and should be of little interest to general users. Package: dh-octave-autopkgtest Source: dh-octave Version: 0.6.0~bpo9+1+nd1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 49 Depends: neurodebian-popularity-contest, gnuplot-nox, fonts-freefont-otf Priority: optional Section: devel Filename: pool/main/d/dh-octave/dh-octave-autopkgtest_0.6.0~bpo9+1+nd1~nd12.04+1_all.deb Size: 10608 SHA256: 8700cfacc78ea335b4df10707bf0c763b584c6d9b969f81edf9b04181b9c46a2 SHA1: f16ae8df71e84526c02dce36188bf197a13e8a52 MD5sum: 0f7419d330687b305fd542dd115733f7 Description: script for the automatic testing of Octave add-on packages This package contains the dh_octave_check script that runs the unit tests contained in all *.m and *.cc files available in the source tree from which it is launched. It is intended to be used by the support for Octave-Forge add-on packages, which is implemented in autodep8. Package: dh-systemd Source: init-system-helpers Version: 1.18~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 28 Depends: neurodebian-popularity-contest, perl, debhelper Multi-Arch: foreign Priority: extra Section: admin Filename: pool/main/i/init-system-helpers/dh-systemd_1.18~nd12.04+1_all.deb Size: 14618 SHA256: ddbeec7281604888a61b78284d21447c1856c097468e2099e1614c587a86f3ea SHA1: 3a69aae1da4b993db1a01b3f9302316391945a99 MD5sum: 672b4cbec2c3a9fb148ce70a89f71636 Description: debhelper add-on to handle systemd unit files dh-systemd provides a debhelper sequence addon named 'systemd' and the dh_systemd_enable/dh_systemd_start commands. . The dh_systemd_enable command adds the appropriate code to the postinst, prerm and postrm maint scripts to properly enable/disable systemd service files. The dh_systemd_start command deals with start/stop/restart on upgrades for systemd-only service files. Package: eeglab11-sampledata Source: eeglab11 Version: 11.0.0.0~b~dfsg.1-1~nd11.10+1+nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 8109 Depends: neurodebian-popularity-contest Priority: extra Section: science Filename: pool/main/e/eeglab11/eeglab11-sampledata_11.0.0.0~b~dfsg.1-1~nd11.10+1+nd12.04+1_all.deb Size: 7224748 SHA256: 896e3a64a84c1ecfa3f8aeb72849dbad8afb923046a6efb8f85cef680dd88880 SHA1: 4d6ca1909de2b2ec07ad124633c1ea2a0e41806c MD5sum: 66c6e6dde6068a39cf8a541bd1b66848 Description: sample EEG data for EEGLAB tutorials EEGLAB is sofwware for processing continuous or event-related EEG or other physiological data. . This package provide some tutorial data files shipped with the EEGLAB distribution. Package: fail2ban Version: 0.8.13-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 563 Depends: neurodebian-popularity-contest, python (>= 2.7.1-0ubuntu2), lsb-base (>= 2.0-7) Recommends: iptables, whois, python-pyinotify Suggests: python-gamin, mailx, system-log-daemon Homepage: http://www.fail2ban.org Priority: optional Section: net Filename: pool/main/f/fail2ban/fail2ban_0.8.13-1~nd12.04+1_all.deb Size: 185314 SHA256: 2f6d4e887918dd97eed4b5341c9d3afd03a488778c5e5ff1a59a38d934f06bf8 SHA1: be347381f6cd27f1017c3e5b912a63976f22a3a0 MD5sum: 71e4f72698b87df429ffddd6ac73f617 Description: ban hosts that cause multiple authentication errors Fail2ban monitors log files (e.g. /var/log/auth.log, /var/log/apache/access.log) and temporarily or persistently bans failure-prone addresses by updating existing firewall rules. Fail2ban allows easy specification of different actions to be taken such as to ban an IP using iptables or hostsdeny rules, or simply to send a notification email. . By default, it comes with filter expressions for various services (sshd, apache, qmail, proftpd, sasl etc.) but configuration can be easily extended for monitoring any other text file. All filters and actions are given in the config files, thus fail2ban can be adopted to be used with a variety of files and firewalls. Package: fis-gtm Version: 6.0-003-2~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 36 Depends: neurodebian-popularity-contest, fis-gtm-6.0-003 Provides: mumps Homepage: http://sourceforge.net/projects/fis-gtm Priority: optional Section: database Filename: pool/main/f/fis-gtm/fis-gtm_6.0-003-2~nd12.04+1_all.deb Size: 15116 SHA256: 5ace73b3975a650b726e2816d3afa71305c1b9f961348c3d258869a2a35b3f02 SHA1: a0c815f4da59d30d6d30b3a7b1c64a3238ac0894 MD5sum: 7fbec5de0e31b1c0546d29627e4b521d Description: metapackage for the latest version of FIS-GT.M database GT.M is a database engine with scalability proven in large real-time transaction processing systems that have thousands of concurrent users, individual database file sizes to the Terabyte range (with virtually unlimited aggregate database sizes). Yet the light footprint of GT.M allows it to also scale down for use in small applications and software appliances (virtual machines). . The GT.M data model is hierarchical associative memory (i.e., multi-dimensional array) that imposes no restrictions on the data types of the indexes or content - the application logic can impose any schema, dictionary or data organization suited to its problem domain. (Database engines that do not impose schemas, but which allow layered application software to impose and use whatever schema that is appropriate to the application are popularly referred to as "document oriented", "schemaless" or "schema-free" databases.) . GT.M's compiler for the standard M (also known as MUMPS) scripting language implements full support for ACID (Atomic, Consistent, Isolated, Durable) transactions, using optimistic concurrency control and software transactional memory (STM) that resolves the common mismatch between databases and programming languages. Its unique ability to create and deploy logical multi-site configurations of applications provides unrivaled continuity of business in the face of not just unplanned events, but also planned events, including planned events that include changes to application logic and schema. . This metapackage always depends from the default fis-gtm version. Package: freeipmi Version: 1.4.9-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1 Depends: neurodebian-popularity-contest, freeipmi-common (= 1.4.9-1~nd12.04+1), freeipmi-tools, freeipmi-ipmidetect, freeipmi-bmc-watchdog Homepage: http://www.gnu.org/software/freeipmi/ Priority: extra Section: admin Filename: pool/main/f/freeipmi/freeipmi_1.4.9-1~nd12.04+1_all.deb Size: 1122 SHA256: 3448ed7ac709ca13868cff5c1782378d4461499a3044fe76182d28a93bd579ca SHA1: 8839c136f044efbd9767ffd98cbfc56b31ba2fe9 MD5sum: 33d0d980f29054a0557a06531ffb11d1 Description: GNU implementation of the IPMI protocol FreeIPMI is a collection of Intelligent Platform Management IPMI system software. It provides in-band and out-of-band software and a development library conforming to the Intelligent Platform Management Interface (IPMI v1.5 and v2.0) standards. . This metapackage depends on all separate modules of freeipmi. Package: freeipmi-common Source: freeipmi Version: 1.4.9-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 306 Pre-Depends: dpkg (>= 1.15.7.2~) Depends: neurodebian-popularity-contest Suggests: freeipmi-tools Homepage: http://www.gnu.org/software/freeipmi/ Priority: extra Section: admin Filename: pool/main/f/freeipmi/freeipmi-common_1.4.9-1~nd12.04+1_all.deb Size: 196830 SHA256: f207a02406252485a3e24555c26fc2aeb82e6bd7f4183a77e7cf340f72064c72 SHA1: 7113882a226f87ca8ab43810b41b4bb152175693 MD5sum: 5af6ff8a55588bd2b581addf9ff67872 Description: GNU implementation of the IPMI protocol - common files FreeIPMI is a collection of Intelligent Platform Management IPMI system software. It provides in-band and out-of-band software and a development library conforming to the Intelligent Platform Management Interface (IPMI v1.5 and v2.0) standards. . This package provides configuration used by the rest of FreeIPMI framework and generic documentation to orient the user. Package: fslview-doc Source: fslview Version: 4.0.1-7~nd12.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 2898 Depends: neurodebian-popularity-contest Homepage: http://www.fmrib.ox.ac.uk/fsl/fslview Priority: optional Section: doc Filename: pool/main/f/fslview/fslview-doc_4.0.1-7~nd12.04+1_all.deb Size: 2366266 SHA256: eea17c8376a6cbcdd9e7bd8a534b6cd4405c04fcc288e6e2d10185213ce5ad87 SHA1: 230d6c02f227954412b27e6938a8eb2c288b66e3 MD5sum: 4aca0237b3c993000c5c5dcb2437df1c Description: Documentation for FSLView This package provides the online documentation for FSLView. . FSLView is part of FSL. Package: git-annex-remote-rclone Version: 0.5-1~ndall+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 23 Depends: neurodebian-popularity-contest, git-annex | git-annex-standalone, rclone Homepage: https://github.com/DanielDent/git-annex-remote-rclone Priority: optional Section: utils Filename: pool/main/g/git-annex-remote-rclone/git-annex-remote-rclone_0.5-1~ndall+1_all.deb Size: 7842 SHA256: 0b1d65c740ce1073ecdae6db121d304fe02c4bb95df552326894118a65b38319 SHA1: 34a2323c4387e61c4a69617150c463f9a7b772c5 MD5sum: 00c5a0407a998eba72d4f5eb0ad71189 Description: rclone-based git annex special remote This is a wrapper around rclone to make any destination supported by rclone usable with git-annex. . Cloud storage providers supported by rclone currently include: * Google Drive * Amazon S3 * Openstack Swift / Rackspace cloud files / Memset Memstore * Dropbox * Google Cloud Storage * Microsoft One Drive * Hubic * Backblaze B2 * Yandex Disk . Note: although Amazon Cloud Drive support is implemented, it is broken ATM see https://github.com/DanielDent/git-annex-remote-rclone/issues/22 . Package: git-hub Version: 0.10.3-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 146 Depends: neurodebian-popularity-contest, python, git (>= 1:1.7.7) Homepage: https://github.com/sociomantic/git-hub Priority: optional Section: vcs Filename: pool/main/g/git-hub/git-hub_0.10.3-1~nd12.04+1_all.deb Size: 37422 SHA256: 9b2f5b6c30134b5e3da2448c50c42df771c27cc94b44f79dd7b8980169243d77 SHA1: 44beb1430960da093222a0b834d0fc5d6babee73 MD5sum: 763b0adf6e6841ad0d6dcbd24feb507b Description: Git command line interface to GitHub git hub is a simple command line interface to GitHub, enabling most useful GitHub tasks (like creating and listing pull request or issues) to be accessed directly through the Git command line. . Although probably the most outstanding feature (and the one that motivated the creation of this tool) is the pull rebase command, which is the rebasing version of the GitHub Merge (TM) button. This enables an easy workflow that doesn't involve thousands of merges which makes the repository history unreadable. . Another unique feature is the ability to transform an issue into a pull request by attaching commits to it (this is something offered by the GitHub API but not by the web interface). Package: gmsl Version: 1.1.5-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 78 Depends: neurodebian-popularity-contest, make Homepage: http://gmsl.sourceforge.net/ Priority: optional Section: devel Filename: pool/main/g/gmsl/gmsl_1.1.5-1~nd12.04+1_all.deb Size: 16574 SHA256: efafc0694169e80ae7bd62825dc75da2af886d415c2f479f3b935cb98917f05d SHA1: e1f0efc408414e41fb7a18fedfec77e2142603d8 MD5sum: 539264aa54e414f556d44b29a6bcca65 Description: extra functions to extend functionality of GNU Makefiles The GNU Make Standard Library (GMSL) is a collection of functions implemented using native GNU Make functionality that provide list and string manipulation, integer arithmetic, associative arrays, stacks, and debugging facilities. . Note that despite the name of this project, this library is NOT standard and is NOT written or distributed by the GNU project. Package: golang-github-ncw-rclone-dev Source: rclone Version: 1.41-1~ndall0 Architecture: all Maintainer: Debian Go Packaging Team Installed-Size: 2492 Depends: golang-bazil-fuse-dev, golang-github-aws-aws-sdk-go-dev, golang-github-mreiferson-go-httpclient-dev, golang-github-ncw-go-acd-dev, golang-github-ncw-swift-dev, golang-github-pkg-errors-dev, golang-github-pkg-sftp-dev, golang-github-rfjakob-eme-dev, golang-github-skratchdot-open-golang-dev, golang-github-spf13-cobra-dev, golang-github-spf13-pflag-dev, golang-github-stacktic-dropbox-dev, golang-github-stretchr-testify-dev, golang-github-tsenart-tb-dev, golang-github-unknwon-goconfig-dev, golang-github-vividcortex-ewma-dev, golang-golang-x-crypto-dev, golang-golang-x-net-dev, golang-golang-x-oauth2-google-dev, golang-golang-x-sys-dev, golang-golang-x-text-dev, golang-google-api-dev Homepage: https://github.com/ncw/rclone Priority: optional Section: devel Filename: pool/main/r/rclone/golang-github-ncw-rclone-dev_1.41-1~ndall0_all.deb Size: 399416 SHA256: 528b53f3312375d31d5cebb95472a57272cf242e14a92cfdf99c45be2ff5511d SHA1: 75f8871fd668e815023267a857b37ad60b9d1c2f MD5sum: a87865eafe10185420838e2e4ffd7b55 Description: go source code of rclone Rclone is a program to sync files and directories between the local file system and a variety of commercial cloud storage providers. . This package contains rclone's source code. Package: guacamole Source: guacamole-client Version: 0.8.3-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 475 Depends: neurodebian-popularity-contest, guacd Recommends: libguac-client-vnc0 Suggests: tomcat6 | jetty Homepage: http://guac-dev.org/ Priority: extra Section: net Filename: pool/main/g/guacamole-client/guacamole_0.8.3-1~nd12.04+1_all.deb Size: 428466 SHA256: 38db4d7d2795ac8c3248830ca92479578e76107b52eb1a7553a872adf6fb6d0e SHA1: 2ca3d0972eb9e0f4b902ee1cc578cd7e37e295f3 MD5sum: 7b6a33d7e1e05c80b9b1084b4501e04f Description: HTML5 web application for accessing remote desktops Guacamole is an HTML5 web application that provides access to a desktop environment using remote desktop protocols. A centralized server acts as a tunnel and proxy, allowing access to multiple desktops through a web browser. No plugins are needed: the client requires nothing more than a web browser supporting HTML5 and AJAX. Package: guacamole-tomcat Source: guacamole-client Version: 0.8.3-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 11 Depends: neurodebian-popularity-contest, debconf, guacamole, tomcat6, libguac-client-vnc0, debconf (>= 0.5) | debconf-2.0 Homepage: http://guac-dev.org/ Priority: extra Section: net Filename: pool/main/g/guacamole-client/guacamole-tomcat_0.8.3-1~nd12.04+1_all.deb Size: 6952 SHA256: 6f08ab93a37df1485408fd955e65d7dec68f62ab0bb83504fa0a2afa8828f517 SHA1: ebaeb7e02d2edc087644489ead2a95ad0f4aa8de MD5sum: a27639cbc7304591cf55d873e76a598d Description: Tomcat-based Guacamole install with VNC support Guacamole is an HTML5 web application that provides access to a desktop environment using remote desktop protocols. A centralized server acts as a tunnel and proxy, allowing access to multiple desktops through a web browser. No plugins are needed: the client requires nothing more than a web browser supporting HTML5 and AJAX. . This metapackage depends on Tomcat, Guacamole, and the VNC support plugin for guacamole. Guacamole is automatically installed and configured under Tomcat. Package: heudiconv Version: 0.1-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 79 Depends: neurodebian-popularity-contest, python, python-dcmstack, python-dicom, python-nibabel, python-numpy, python-nipype Recommends: mricron Homepage: https://github.com/nipy/heudiconv Priority: optional Section: science Filename: pool/main/h/heudiconv/heudiconv_0.1-1~nd12.04+1_all.deb Size: 10884 SHA256: d9d9e36053db3812162d7befffbaad8fc0741e536e6be521231f64cf1c425c70 SHA1: 8d16a087f988c4c8f9e30f11cb6dbf0a01e34957 MD5sum: 4b8a5461e67d2d03c737fbfc1dab5fb7 Description: DICOM converter with support for structure heuristics This is a flexible dicom converter for organizing brain imaging data into structured directory layouts. It allows for flexible directory layouts and naming schemes through customizable heuristics implementations. It only converts the necessary dicoms, not everything in a directory. It tracks the provenance of the conversion from dicom to nifti in w3c prov format. Package: htcondor-doc Source: condor Version: 8.4.9~dfsg.1-2~nd12.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 5973 Depends: neurodebian-popularity-contest Breaks: condor-doc (<< 8.0.5~) Replaces: condor-doc (<< 8.0.5~) Homepage: http://research.cs.wisc.edu/htcondor Priority: extra Section: doc Filename: pool/main/c/condor/htcondor-doc_8.4.9~dfsg.1-2~nd12.04+1_all.deb Size: 1452124 SHA256: 89d4d7da3a0890a5dd968c5078bb534b92ea048979564d03a6723f8d59be1063 SHA1: 65edf9b62aab9d626d0f2ac02d519209445aa468 MD5sum: e1a6bdb8b15c08020435df44d087f260 Description: distributed workload management system - documentation Like other full-featured batch systems, HTCondor provides a job queueing mechanism, scheduling policy, priority scheme, resource monitoring, and resource management. Users submit their serial or parallel jobs to HTCondor; HTCondor places them into a queue. It chooses when and where to run the jobs based upon a policy, carefully monitors their progress, and ultimately informs the user upon completion. . Unlike more traditional batch queueing systems, HTCondor can also effectively harness wasted CPU power from otherwise idle desktop workstations. HTCondor does not require a shared file system across machines - if no shared file system is available, HTCondor can transfer the job's data files on behalf of the user. . This package provides HTCondor's documentation in HTML and PDF format, as well as configuration and other examples. Package: impressive Version: 0.11.1-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 485 Depends: neurodebian-popularity-contest, python, python-pygame, python-pil | python-imaging, poppler-utils | mupdf-tools | xpdf-utils (>= 3.02-2) Recommends: mplayer, pdftk, perl, xdg-utils Suggests: ghostscript, latex-beamer Conflicts: keyjnote (<< 0.10.2r-0) Replaces: keyjnote (<< 0.10.2r-0) Provides: keyjnote Homepage: http://impressive.sourceforge.net/ Priority: optional Section: x11 Filename: pool/main/i/impressive/impressive_0.11.1-1~nd12.04+1_all.deb Size: 192150 SHA256: 466a6e0f5dc4c509273aa1f579018fafe5432c385a8d7de8176be3df0ce3e714 SHA1: dbb03f7feb8f48816da85f916685d5a18760e7b8 MD5sum: 9fc0e6d3ec0ad921285dec6c8d84de63 Description: PDF presentation tool with eye candies Impressive is a program that displays presentation slides using OpenGL. Smooth alpha-blended slide transitions are provided for the sake of eye candy, but in addition to this, Impressive offers some unique tools that are really useful for presentations. Some of them are: * Overview screen * Highlight boxes * Spotlight effect * Presentation scripting and customization * Support of movies presentation * Active hyperlinks within PDFs Package: incf-nidash-oneclick-clients Source: incf-nidash-oneclick Version: 2.0-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 28 Depends: neurodebian-popularity-contest, python (>= 2.5.0), python-dicom, dcmtk, python-httplib2 Homepage: http://xnat.incf.org/ Priority: extra Section: science Filename: pool/main/i/incf-nidash-oneclick/incf-nidash-oneclick-clients_2.0-1~nd12.04+1_all.deb Size: 9652 SHA256: 2e8333994fe771da783ce3abdf490b2250b2643c8e879a9ed656a123425f949f SHA1: fcd79a61add1454528aa8aaaff1f438ae66859d5 MD5sum: 66bc6f30071a526052024744e99d9448 Description: utility for pushing DICOM data to the INCF datasharing server A command line utility for anonymizing and sending DICOM data to the XNAT image database at the International Neuroinformatics Coordinating Facility (INCF). This tool is maintained by the INCF NeuroImaging DataSharing (NIDASH) task force. Package: init-system-helpers Version: 1.18~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 29 Depends: neurodebian-popularity-contest, perl Breaks: systemd (<< 44-12) Multi-Arch: foreign Priority: extra Section: admin Filename: pool/main/i/init-system-helpers/init-system-helpers_1.18~nd12.04+1_all.deb Size: 14312 SHA256: 67c46952763df45dd76c51de514541f295c30e55f3131aec49352cab666fa2ca SHA1: 139d9200d58db5259a0136234684437f67f2b6bf MD5sum: 3f48b61770938815de7e089bc86b8e20 Description: helper tools for all init systems This package contains helper tools that are necessary for switching between the various init systems that Debian contains (e.g. sysvinit, upstart, systemd). An example is deb-systemd-helper, a script that enables systemd unit files without depending on a running systemd. . While this package is maintained by pkg-systemd-maintainers, it is NOT specific to systemd at all. Maintainers of other init systems are welcome to include their helpers in this package. Package: insighttoolkit4-examples Source: insighttoolkit4 Version: 4.5.0-3~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2672 Depends: neurodebian-popularity-contest Suggests: libinsighttoolkit4-dev Conflicts: insighttoolkit-examples Replaces: insighttoolkit-examples Homepage: http://www.itk.org/ Priority: optional Section: devel Filename: pool/main/i/insighttoolkit4/insighttoolkit4-examples_4.5.0-3~nd12.04+1_all.deb Size: 2405110 SHA256: 1f6dda3f148686603e558ca0d894f008164e1bb432e5ac3992fc20f9f62acf6b SHA1: ea5d53f21b517ec1864400205f0ee5c7fd0d464e MD5sum: 78cdb356f2eb0b8be34ea2f3ca6eef13 Description: Image processing toolkit for registration and segmentation - examples ITK is an open-source software toolkit for performing registration and segmentation. Segmentation is the process of identifying and classifying data found in a digitally sampled representation. Typically the sampled representation is an image acquired from such medical instrumentation as CT or MRI scanners. Registration is the task of aligning or developing correspondences between data. For example, in the medical environment, a CT scan may be aligned with a MRI scan in order to combine the information contained in both. . This package contains the source for example programs. Package: ipython01x Version: 0.13.2-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4665 Depends: neurodebian-popularity-contest, python-argparse, python-configobj, python-decorator, python-pexpect, python-simplegeneric, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8) Recommends: python-tornado (>= 2.1.0~), python-pygments, python-qt4, python-zmq, python-matplotlib Suggests: ipython01x-doc, python-gobject, python-gtk2, python-numpy, python-profiler Conflicts: ipython-common, python2.3-ipython, python2.4-ipython Replaces: ipython-common, python2.3-ipython, python2.4-ipython Homepage: http://ipython.org/ Priority: optional Section: python Filename: pool/main/i/ipython01x/ipython01x_0.13.2-1~nd12.04+1_all.deb Size: 1286038 SHA256: 16d6d5b7b507f59549666293a141e328687021ff78b1abb9e8216b17f9640cb6 SHA1: 4a45a68818a3ae7d6d32cb44808385e8b76dc2d2 MD5sum: 3d3ef76055db419ab9679c87e685f2ac Description: enhanced interactive Python shell IPython can be used as a replacement for the standard Python shell, or it can be used as a complete working environment for scientific computing (like Matlab or Mathematica) when paired with the standard Python scientific and numerical tools. It supports dynamic object introspections, numbered input/output prompts, a macro system, session logging, session restoring, complete system shell access, verbose and colored traceback reports, auto-parentheses, auto-quoting, and is embeddable in other Python programs. . This is a non-official, custom build of IPython post 0.11 with notebooks support. It provides IPython01X module thus not conflicting with system-wide installed IPython Package: ipython01x-doc Source: ipython01x Version: 0.13.2-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 16655 Depends: neurodebian-popularity-contest, libjs-jquery, ipython01x Homepage: http://ipython.org/ Priority: optional Section: doc Filename: pool/main/i/ipython01x/ipython01x-doc_0.13.2-1~nd12.04+1_all.deb Size: 7232394 SHA256: 9d592a832ec275b572fcc8064278e5dce94ee48ec1560e06e4c56adabed20d1f SHA1: a2cb4113a1570bead3fde2303d3c714215981896 MD5sum: 9877028a6b3d79cd2dc1ec867f1d43d4 Description: enhanced interactive Python shell IPython can be used as a replacement for the standard Python shell, or it can be used as a complete working environment for scientific computing (like Matlab or Mathematica) when paired with the standard Python scientific and numerical tools. It supports dynamic object introspections, numbered input/output prompts, a macro system, session logging, session restoring, complete system shell access, verbose and colored traceback reports, auto-parentheses, auto-quoting, and is embeddable in other Python programs. . This package contains the documentation. . This is a non-official, custom build of IPython post 0.11 with workbooks support. It provides IPython01X module thus not conflicting with system-wide installed IPython Package: ipython01x-notebook Source: ipython01x Version: 0.13.2-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1 Depends: neurodebian-popularity-contest, ipython01x (>= 0.13.1~git33-gcfc5692-2~) Homepage: http://ipython.org/ Priority: extra Section: python Filename: pool/main/i/ipython01x/ipython01x-notebook_0.13.2-1~nd12.04+1_all.deb Size: 900 SHA256: 8fa7dc1ca1b1ae2ba6c52f9bb16f784271a2b01f97137b0d56f0b4b50205bf11 SHA1: e1b13e384ad986e718a0c4e62b8af76b32d1d0da MD5sum: a9a320cbb8c1fe1e4d90e147508ebcdf Description: enhanced interactive Python shell -- notebook dummy package This is a dummy package depending on ipython01x which ships notebook functionality inside. It is made so to stay in line to modularization of official ipython package in Debian. There is no real good reason to install this package. Package: ipython01x-parallel Source: ipython01x Version: 0.13.2-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1 Depends: neurodebian-popularity-contest, ipython01x (>= 0.13.1~git33-gcfc5692-2~) Homepage: http://ipython.org/ Priority: extra Section: oldlibs Filename: pool/main/i/ipython01x/ipython01x-parallel_0.13.2-1~nd12.04+1_all.deb Size: 826 SHA256: 4b5a4d23881ba8686922fef8146a9af51cebecdded01b3e6701c0472bd4e8046 SHA1: e2cafae23f7dd67754b7cf75700947670d5f5c95 MD5sum: 76473935bcaad0b0076d2d8c944b68c4 Description: enhanced interactive Python shell This is a transitional package and can be safely removed after the installation is complete. Package: ipython01x-qtconsole Source: ipython01x Version: 0.13.2-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1 Depends: neurodebian-popularity-contest, ipython01x (>= 0.13.1~git33-gcfc5692-2~) Homepage: http://ipython.org/ Priority: extra Section: python Filename: pool/main/i/ipython01x/ipython01x-qtconsole_0.13.2-1~nd12.04+1_all.deb Size: 910 SHA256: 9972b51729ec7cdc7540414552fd435785581244d4970fafb194a86602eee9df SHA1: 224dcbb7104d6e1cda8ceb604fc84d2cf199aa28 MD5sum: 9cde899e5d8670759c6a496658cc5139 Description: enhanced interactive Python shell -- notebook dummy package This is a dummy package depending on ipython01x which ships qt console functionality inside. It is made so to stay in line to modularization of the official ipython package in Debian. There is no real good reason to install this package. Package: ipython1x Version: 1.1.0+git7-gf5891e9-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 11748 Depends: neurodebian-popularity-contest, python-argparse, python-configobj, python-decorator, python-pexpect, python-simplegeneric, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8) Recommends: python-tornado (>= 2.1.0~), python-pygments, python-qt4, python-zmq, python-matplotlib Suggests: ipython1x-doc, python-gobject, python-gtk2, python-numpy, python-profiler Conflicts: ipython-common, python2.3-ipython, python2.4-ipython Replaces: ipython-common, python2.3-ipython, python2.4-ipython Homepage: http://ipython.org/ Priority: optional Section: python Filename: pool/main/i/ipython1x/ipython1x_1.1.0+git7-gf5891e9-1~nd12.04+1_all.deb Size: 4486482 SHA256: a9679ce6900685fcf954d4d01ad9fdbd05da5d85d790f8495509794f91710784 SHA1: 438a25f32dfda759e82add6230e45cd7d6c958a7 MD5sum: d3e273ea4f535500f0a02f261ea66890 Description: enhanced interactive Python shell IPython can be used as a replacement for the standard Python shell, or it can be used as a complete working environment for scientific computing (like Matlab or Mathematica) when paired with the standard Python scientific and numerical tools. It supports dynamic object introspections, numbered input/output prompts, a macro system, session logging, session restoring, complete system shell access, verbose and colored traceback reports, auto-parentheses, auto-quoting, and is embeddable in other Python programs. . This is a non-official, custom build of IPython post 0.11 with notebooks support. It provides IPython1X module thus not conflicting with system-wide installed IPython Package: ipython1x-doc Source: ipython1x Version: 1.1.0+git7-gf5891e9-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 10392 Depends: neurodebian-popularity-contest, libjs-jquery, ipython1x Homepage: http://ipython.org/ Priority: optional Section: doc Filename: pool/main/i/ipython1x/ipython1x-doc_1.1.0+git7-gf5891e9-1~nd12.04+1_all.deb Size: 4189382 SHA256: 5544d92db502b24d13d4884e942e84dbfeacbdd71311af39d291ea5d2586427e SHA1: 75e1874cf68f4cfaf607f79467e057b2c79419df MD5sum: c3ce1b5d4fe1414b308dc4bce5431f0c Description: enhanced interactive Python shell IPython can be used as a replacement for the standard Python shell, or it can be used as a complete working environment for scientific computing (like Matlab or Mathematica) when paired with the standard Python scientific and numerical tools. It supports dynamic object introspections, numbered input/output prompts, a macro system, session logging, session restoring, complete system shell access, verbose and colored traceback reports, auto-parentheses, auto-quoting, and is embeddable in other Python programs. . This package contains the documentation. . This is a non-official, custom build of IPython post 0.11 with workbooks support. It provides IPython1X module thus not conflicting with system-wide installed IPython Package: ipython1x-notebook Source: ipython1x Version: 1.1.0+git7-gf5891e9-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1 Depends: neurodebian-popularity-contest, ipython1x (>= 0.13.1~git33-gcfc5692-2~) Homepage: http://ipython.org/ Priority: extra Section: python Filename: pool/main/i/ipython1x/ipython1x-notebook_1.1.0+git7-gf5891e9-1~nd12.04+1_all.deb Size: 912 SHA256: 8369b7c15a5c5fadeea50b7556032e9f9bbd1f880f93d364686bc6632e004487 SHA1: 38f3d514258c71e3c683c2650a4bb3883bd5852e MD5sum: 9c62d71dcbe9064670c8e521a021382d Description: enhanced interactive Python shell -- notebook dummy package This is a dummy package depending on ipython1x which ships notebook functionality inside. It is made so to stay in line to modularization of official ipython package in Debian. There is no real good reason to install this package. Package: ipython1x-parallel Source: ipython1x Version: 1.1.0+git7-gf5891e9-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1 Depends: neurodebian-popularity-contest, ipython1x (>= 0.13.1~git33-gcfc5692-2~) Homepage: http://ipython.org/ Priority: extra Section: oldlibs Filename: pool/main/i/ipython1x/ipython1x-parallel_1.1.0+git7-gf5891e9-1~nd12.04+1_all.deb Size: 836 SHA256: e0c1a55d2fff9a68242d3c5da94d52c9ea8f897ed68306493c09a27a0a6913cb SHA1: bf342227921322e4c2784a602946c2b79b3c706a MD5sum: 8918d84c0e426e0b94fe03ed223fdb4d Description: enhanced interactive Python shell This is a transitional package and can be safely removed after the installation is complete. Package: ipython1x-qtconsole Source: ipython1x Version: 1.1.0+git7-gf5891e9-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1 Depends: neurodebian-popularity-contest, ipython1x (>= 0.13.1~git33-gcfc5692-2~) Homepage: http://ipython.org/ Priority: extra Section: python Filename: pool/main/i/ipython1x/ipython1x-qtconsole_1.1.0+git7-gf5891e9-1~nd12.04+1_all.deb Size: 926 SHA256: c25adfa065c94e212679ec7430c5ebb13c2737b8adc02cfb1c2ae441f0720acb SHA1: 57861ed3d3354a06571a0aea73fb4687ee56cbbc MD5sum: 64066110b7b06ea5b7b63a4ee41885ca Description: enhanced interactive Python shell -- notebook dummy package This is a dummy package depending on ipython1x which ships qt console functionality inside. It is made so to stay in line to modularization of the official ipython package in Debian. There is no real good reason to install this package. Package: libfreenect-doc Source: libfreenect Version: 1:0.1.2+dfsg-6~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 482 Depends: neurodebian-popularity-contest Multi-Arch: foreign Homepage: http://openkinect.org/ Priority: extra Section: doc Filename: pool/main/libf/libfreenect/libfreenect-doc_0.1.2+dfsg-6~nd12.04+1_all.deb Size: 90826 SHA256: ce3aa05ed1adb1052c95f64d8d6bca0c9b68ca36b62d16a84153a932f7a95edd SHA1: 953a5d482244b055130a34ea227d553dc89b9e6e MD5sum: 77f83c1d42d041e8642df0f5227f05fe Description: library for accessing Kinect device -- documentation libfreenect is a cross-platform library that provides the necessary interfaces to activate, initialize, and communicate data with the Kinect hardware. Currently, the library supports access to RGB and depth video streams, motors, accelerometer and LED and provide binding in different languages (C++, Python...) . This library is the low level component of the OpenKinect project which is an open community of people interested in making use of the Xbox Kinect hardware with PCs and other devices. . This package contains the documentation of the API of libfreenect. Package: libisis-core-dev Source: isis Version: 0.4.7-1~nd11.10+1+nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 260 Depends: neurodebian-popularity-contest, libisis-core0 (>= 0.4.7-1~nd11.10+1+nd12.04+1), libisis-core0 (<< 0.4.7-1~nd11.10+1+nd12.04+1.1~) Homepage: https://github.com/isis-group Priority: extra Section: libdevel Filename: pool/main/i/isis/libisis-core-dev_0.4.7-1~nd11.10+1+nd12.04+1_all.deb Size: 69044 SHA256: 676aa659129766e70ed2a833d4341b47e95766cffe931f88ed304d34e700696e SHA1: d8c229966b0716f28ff127aa29d3909149fc1aa9 MD5sum: 8b63e70f78d6b4906a79298a3cb3d11a Description: I/O framework for neuroimaging data This framework aids access of and conversion between various established neuro-imaging data formats, like Nifti, Analyze, DICOM and VISTA. ISIS is extensible with plugins to add support for additional data formats. . This package provides headers and library to develop applications with ISIS. Package: libisis-qt4-dev Source: isis Version: 0.4.7-1~nd11.10+1+nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 8 Depends: neurodebian-popularity-contest, libisis-qt4-0 (>= 0.4.7-1~nd11.10+1+nd12.04+1), libisis-qt4-0 (<< 0.4.7-1~nd11.10+1+nd12.04+1.1~), libqt4-dev Conflicts: isis-qt4-dev Homepage: https://github.com/isis-group Priority: extra Section: libdevel Filename: pool/main/i/isis/libisis-qt4-dev_0.4.7-1~nd11.10+1+nd12.04+1_all.deb Size: 6062 SHA256: d421f9a584c148a1d0506dc3fe98ef26ded298ba20cdd7852f4800209078f8da SHA1: 4b1fa88ac55f52e9b6bb1531467fb40c6c6ee386 MD5sum: ff41be8c4a67e54cd9b0c8427491a549 Description: Qt4 bindings for ISIS data I/O framework (development headers) This framework aids access of and conversion between various established neuro-imaging data formats, like Nifti, Analyze, DICOM and VISTA. ISIS is extensible with plugins to add support for additional data formats. Package: libmialm-doc Source: libmialm Version: 1.0.7-2~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 232 Depends: neurodebian-popularity-contest Suggests: devhelp Homepage: http://mia.sourceforge.net Priority: optional Section: doc Filename: pool/main/libm/libmialm/libmialm-doc_1.0.7-2~nd12.04+1_all.deb Size: 25098 SHA256: 39810b15c3a65d5401ff8fc18cf1300cb98d7b1a35fa6d5637521090674f5528 SHA1: 547aaef9d563e0af0dc6725da74e71af9a9d021a MD5sum: 08cbe5f738c8ddf93c1806e681164954 Description: Documentation for the MIA landmark library This library implements handling for landmarks and 3D view positioning for optimal landmark visibility, and in-and output of these landmarks. This library is part of the MIA tool chain for medical image analysis. This package contains the library documentation. Package: libnifti-doc Source: nifticlib Version: 2.0.0-2~nd12.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 1458 Depends: neurodebian-popularity-contest, libjs-jquery Homepage: http://niftilib.sourceforge.net Priority: optional Section: doc Filename: pool/main/n/nifticlib/libnifti-doc_2.0.0-2~nd12.04+1_all.deb Size: 244824 SHA256: 6ae5e484e72e4cbd7ecedd09fbd71217e93143a5d761914c2ad8047983f06c7a SHA1: 94da838b8f50eefea2b266ff8e76211df298ea73 MD5sum: 0e12a13d7e17985137bb3f4d0f34b869 Description: NIfTI library API documentation Niftilib is a set of i/o libraries for reading and writing files in the NIfTI-1 data format. NIfTI-1 is a binary file format for storing medical image data, e.g. magnetic resonance image (MRI) and functional MRI (fMRI) brain images. . This package provides the library API reference documentation. Package: libopenwalnut1-doc Source: openwalnut Version: 1.4.0~rc1+hg3a3147463ee2-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 33007 Depends: neurodebian-popularity-contest, libjs-jquery Homepage: http://www.openwalnut.org Priority: extra Section: doc Filename: pool/main/o/openwalnut/libopenwalnut1-doc_1.4.0~rc1+hg3a3147463ee2-1~nd12.04+1_all.deb Size: 4223780 SHA256: e46b548a8f787cca656e1edcb671ae9ea62fb45016f80bc6177fb8af99d83a0c SHA1: 2f0c1661b21c4a05c85fd59a8a3bcdaaa8270e26 MD5sum: f6d355286f1a387052681c3f033d9a79 Description: Developer documentation for the OpenWalnut visualization framework OpenWalnut is a tool for multi-modal medical and brain data visualization. Its universality allows it to be easily extended and used in a large variety of application cases. It is both, a tool for the scientific user and a powerful framework for the visualization researcher. Besides others, it is able to load NIfTI data, VTK line data and RIFF-format CNT/AVR-files. OpenWalnut provides many standard visualization tools like line integral convolution (LIC), isosurface-extraction, glyph-rendering or interactive fiber-data exploration. The powerful framework of OpenWalnut allows researchers and power-users to easily extend the functionality to their specific needs. . This package contains the core API documentation of OpenWalnut. Package: libvia-doc Source: via Version: 2.0.4-2~nd11.10+1+nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 903 Depends: neurodebian-popularity-contest Homepage: http://www.cbs.mpg.de/institute/software/lipsia Priority: optional Section: doc Filename: pool/main/v/via/libvia-doc_2.0.4-2~nd11.10+1+nd12.04+1_all.deb Size: 118526 SHA256: 70f7d7d0530cd4a253c866ab3a50af8055d66a646e80aeb59d04c02a6c8f3766 SHA1: 80e49482b9207ed42f89c6b98dc5ea1ba7ff8cae MD5sum: c5bb11d4da40e97b8af9c9577f74be1b Description: VIA library API documentation VIA is a volumetric image analysis suite. The included libraries provide about 70 image analysis functions. . This package provides the library API reference documentation. Package: matlab-support-dev Source: matlab-support Version: 0.0.21~nd12.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 39 Depends: neurodebian-popularity-contest Conflicts: matlab-dev (<= 0.0.14~) Replaces: matlab-dev (<= 0.0.14~) Priority: optional Section: devel Filename: pool/main/m/matlab-support/matlab-support-dev_0.0.21~nd12.04+1_all.deb Size: 7692 SHA256: 0254da4857630efa5523eb641213b0eacda8171824c7602d6f6d9ee057bb92cc SHA1: bf4f72e6754db93d615569e99834a5d82e92f0ec MD5sum: 7192575b14200c6fceef6eb11a94aefb Description: helpers for packages building MATLAB toolboxes This package provides a Makefile snippet (analogous to the one used for Octave) that configures the locations for architecture independent M-files, binary MEX-extensions, and their corresponding sources. This package can be used as a build-dependency by other packages shipping MATLAB toolboxes. Package: mricron-data Source: mricron Version: 0.20140804.1~dfsg.1-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 1708 Depends: neurodebian-popularity-contest Homepage: http://www.cabiatl.com/mricro/mricron/index.html Priority: extra Section: science Filename: pool/main/m/mricron/mricron-data_0.20140804.1~dfsg.1-1~nd12.04+1_all.deb Size: 1663220 SHA256: 572c18306639bb776920bc743c15ab3cb19fa12f3b15daea632d09fd3996d286 SHA1: 4999830ab9f33aa3940bc3092a7aab84af87eecc MD5sum: 0fe29919537c11f3e7141f6a2a068cb4 Description: data files for MRIcron This is a GUI-based visualization and analysis tool for (functional) magnetic resonance imaging. MRIcron can be used to create 2D or 3D renderings of statistical overlay maps on brain anatomy images. Moreover, it aids drawing anatomical regions-of-interest (ROI), or lesion mapping, as well as basic analysis of functional timeseries (e.g. creating plots of peristimulus signal-change). . This package provides data files for MRIcron, such as brain atlases, anatomy, and color schemes. Package: mricron-doc Source: mricron Version: 0.20140804.1~dfsg.1-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 1019 Depends: neurodebian-popularity-contest Homepage: http://www.cabiatl.com/mricro/mricron/index.html Priority: extra Section: doc Filename: pool/main/m/mricron/mricron-doc_0.20140804.1~dfsg.1-1~nd12.04+1_all.deb Size: 738048 SHA256: 3078c52bc10688e17e06f787096ba8b5fedbd18b2a6c49ae6f69ac34cea8f5ae SHA1: a9d479880928f92a29af695e11ba003a4fbfa44c MD5sum: 0a0c3fad5701a7a9c111b8d80218b213 Description: data files for MRIcron This is a GUI-based visualization and analysis tool for (functional) magnetic resonance imaging. MRIcron can be used to create 2D or 3D renderings of statistical overlay maps on brain anatomy images. Moreover, it aids drawing anatomical regions-of-interest (ROI), or lesion mapping, as well as basic analysis of functional timeseries (e.g. creating plots of peristimulus signal-change). . This package provides documentation for MRIcron in HTML format. Package: mridefacer Version: 0.2-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 674 Depends: neurodebian-popularity-contest, num-utils, fsl-5.0-core | fsl-core Homepage: https://github.com/hanke/mridefacer Priority: optional Section: science Filename: pool/main/m/mridefacer/mridefacer_0.2-1~nd12.04+1_all.deb Size: 637596 SHA256: 72b7ba8e3bf3356136a3e90123259bb9e5f01e58bfee882fe95c1cf974000a84 SHA1: 820ae2b5cab823d062c300564337d4a4d1961f1c MD5sum: e892b4a75a0cc68ef62b83c6e785daed Description: de-identification of MRI data This tool creates a de-face mask for volumetric images by aligning a template mask to the input. Such a mask can be used to remove image data from the vicinity of the facial surface, the auricles, and teeth in order to prevent a possible identification of a person based on these features. mrideface can process individual or series of images. In the latter case, the computed transformation between template image and input image will be updated incrementally for the next image in the series. This feature is most suitable for processing images that have been recorded in temporal succession. Package: mrtrix-doc Source: mrtrix Version: 0.2.12-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 3522 Depends: neurodebian-popularity-contest Homepage: http://www.brain.org.au/software/mrtrix Priority: extra Section: doc Filename: pool/main/m/mrtrix/mrtrix-doc_0.2.12-1~nd12.04+1_all.deb Size: 3316776 SHA256: 71b0750b718cb94b48953dacbcc3b4d0ef35c023a80a100baf79fce37de0a75c SHA1: 64d3da09e64c43b783d675a29fa727695be30190 MD5sum: 4a9b407024bf8a1071d2375638686644 Description: documentation for mrtrix Set of tools to perform diffusion-weighted MRI white matter tractography of the brain in the presence of crossing fibres, using Constrained Spherical Deconvolution, and a probabilisitic streamlines algorithm. Magnetic resonance images in DICOM, ANALYZE, or uncompressed NIfTI format are supported. . This package provides the documentation in HTML format. Package: netselect-apt Source: netselect Version: 0.3.ds1-25~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 26 Depends: neurodebian-popularity-contest, wget, netselect (>= 0.3.ds1-17) Recommends: curl Suggests: dpkg-dev Enhances: apt Homepage: http://github.com/apenwarr/netselect Priority: optional Section: net Filename: pool/main/n/netselect/netselect-apt_0.3.ds1-25~nd12.04+1_all.deb Size: 17850 SHA256: 1419aff390875c6b00fdc76229b1034aef9d700eda3dbb1154808cccdbd586e5 SHA1: 74e4147d13e9288fd8fec438334f4d6ad8c92fb1 MD5sum: 0baca31c3da276ab8d3b1cf310a0c099 Description: speed tester for choosing a fast Debian mirror This package provides a utility that can choose the best Debian mirror by downloading the full mirror list and using netselect to find the fastest/closest one. . It can output a sources.list(5) file that can be used with package management tools such as apt or aptitude. Package: neurodebian Version: 0.38.3~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 117 Depends: python, wget, neurodebian-archive-keyring, debconf (>= 0.5) | debconf-2.0 Recommends: netselect Suggests: neurodebian-desktop, neurodebian-popularity-contest Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian_0.38.3~nd12.04+1_all.deb Size: 91860 SHA256: a0a65be6d359f7c27ec9efb4f6fd5f8d2cf86370d31792bc35c885e32abee9e3 SHA1: bfae85911a574bbee87917b1cdaef889ddb14863 MD5sum: 7bfc31e2c6808c3826b471ff1e7f8e0f Description: neuroscience-oriented distribution - repository configuration The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . This package enables the NeuroDebian repository on top of a standard Debian or Ubuntu system. Package: neurodebian-archive-keyring Source: neurodebian Version: 0.38.3~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 48 Depends: gnupg2 | gnupg, dirmngr Breaks: neurodebian-keyring (<< 0.34~) Replaces: neurodebian-keyring (<< 0.34~) Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-archive-keyring_0.38.3~nd12.04+1_all.deb Size: 12828 SHA256: bed1dd5fd82aa93611882084152cb722f486ee3dd85f1eac4dc658d61e5acc0e SHA1: 7dd9d8e71e240e257e8b8c298c6c55b30b654eae MD5sum: f7e116418ff85f49821fd90b0b51301e Description: neuroscience-oriented distribution - GnuPG archive keys The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . The NeuroDebian project digitally signs its Release files. This package contains the archive keys used for that. Package: neurodebian-desktop Source: neurodebian Version: 0.38.3~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 223 Depends: ssh-askpass-gnome | ssh-askpass, desktop-base, adwaita-icon-theme | gnome-icon-theme, neurodebian-popularity-contest Recommends: reportbug-ng Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-desktop_0.38.3~nd12.04+1_all.deb Size: 558846 SHA256: 60ec3ac864b2be89c42481055a12930b05c715971a450beb7e622bbd2aac0cb4 SHA1: b53580849f8b269cb7c13f1f26d7258761712894 MD5sum: d9a52229619272fc8acea4af2a7c520a Description: neuroscience-oriented distribution - desktop integration The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . This package provides NeuroDebian artwork (icons, background image) and a NeuroDebian menu featuring the most popular neuroscience tools, which will be automatically installed upon initial invocation. Package: neurodebian-dev Source: neurodebian Version: 0.38.3~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 142 Depends: devscripts, neurodebian-archive-keyring Recommends: ubuntu-keyring, python, zerofree, moreutils, time, debian-archive-keyring, apt-utils, cowbuilder, neurodebian-freeze Suggests: virtualbox-ose, virtualbox-ose-fuse, singularity-container Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-dev_0.38.3~nd12.04+1_all.deb Size: 138218 SHA256: ea10eeb296ba976c190dba45af58d8a5cad26e9aff787fb5e4c07255fb689801 SHA1: 623d294a84e6b1b8541163ebd974ece7817b6e94 MD5sum: 50a862c57c2ec25240f992124769ccc9 Description: neuroscience-oriented distribution - development tools The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . This package provides sources and development tools used by NeuroDebian to provide backports for a range of Debian/Ubuntu releases. Package: neurodebian-freeze Source: neurodebian Version: 0.38.3~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 57 Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-freeze_0.38.3~nd12.04+1_all.deb Size: 44980 SHA256: 9c35c15ed06df5b76cb4414badcb4ab339248f83b81676ebda1f8d3403f149d5 SHA1: 1e40eae0093ba6aa81649aa1df47232037007d62 MD5sum: bb6534203bbdb4b46441c42b62874199 Description: nd_freeze tool to freeze APT sources to use snapshots The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . This minimalistic package provides nd_freeze script to be used in rich or minimalistic environments (such as Docker or Singularity recipes) to freeze their APT sources. Intended to assist making such images reproducible. Package: neurodebian-guest-additions Source: neurodebian Version: 0.32~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 107 Pre-Depends: virtualbox-ose-guest-utils, virtualbox-ose-guest-x11, virtualbox-ose-guest-dkms Depends: sudo, neurodebian-desktop, gdm | lightdm, zenity Recommends: chromium-browser, update-manager-gnome, update-notifier Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-guest-additions_0.32~nd12.04+1_all.deb Size: 15356 SHA256: 60258d2d2dd1b6aa3fb07a8558baa17f0cfb1beda664a0e2957ef05b4f998760 SHA1: f48f1908c7f09c1f1905db24f2c958c3a6ae6b8b MD5sum: 7d419de642c6b15c94bf038ddedcefc3 Description: NeuroDebian guest additions (DO NOT INSTALL OUTSIDE VIRTUALBOX) This package configures a Debian installation as a guest operating system in a VirtualBox-based virtual machine for NeuroDebian. . DO NOT install this package unless you know what you are doing! For example, installation of this package relaxes several security mechanisms. Package: neurodebian-keyring Source: neurodebian Version: 0.32~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 8 Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-keyring_0.32~nd12.04+1_all.deb Size: 7636 SHA256: 6ff773232ea1fe708517cea7d7b9b1957bc0bc79163d9d67d6c89eaa92e722ba SHA1: f79d2ed9ae86da3b87bf207b080d91f8089c7119 MD5sum: efdf83b2ee75cc05053de967a9411e49 Description: GnuPG archive keys of the NeuroDebian archive The NeuroDebian project digitally signs its Release files. This package contains the archive keys used for that. Package: neurodebian-popularity-contest Source: neurodebian Version: 0.38.3~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 51 Depends: popularity-contest Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-popularity-contest_0.38.3~nd12.04+1_all.deb Size: 16080 SHA256: 9b1dcf5f39dbf6b3927c11091bb4c44c4e611670190328742fbba4856589a12f SHA1: 25243cc28798b38c6ae7e57fdf5699c2b53846ee MD5sum: 777b2913264fb21a24c0ca9f549e91e3 Description: neuroscience-oriented distribution - popcon integration The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . This package is a complement to the generic popularity-contest package to enable anonymous submission of usage statistics to NeuroDebian in addition to the popcon submissions to the underlying distribution (either Debian or Ubuntu) popcon server. . Participating in popcon is important for the following reasons: * Popular packages receive more attention from developers; bugs are fixed faster and updates are provided quicker. * It ensures that support is not dropped for a previous release of Debian or Ubuntu while there are active users. * User statistics may be useful for upstream research software developers seeking funding for continued development. . This requires that popcon is activated for the underlying distribution (Debian or Ubuntu), which can be achieved by running "dpkg-reconfigure popularity-contest" as root. Package: nifti2dicom-data Source: nifti2dicom Version: 0.4.11-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 732 Depends: neurodebian-popularity-contest Homepage: https://github.com/biolab-unige/nifti2dicom Priority: optional Section: science Filename: pool/main/n/nifti2dicom/nifti2dicom-data_0.4.11-1~nd12.04+1_all.deb Size: 616682 SHA256: 4ffcfc2e6ad58906cdbf49f98632f335e3473a7573d6588dc72ce8d3539e55c6 SHA1: 40fea41952626a42366c7d15dd8d9d1fb68f58ea MD5sum: 95f40eac8b3efc357367df446791d18b Description: data files for nifti2dicom This package contains architecture-independent supporting data files required for use with nifti2dicom, such as such as documentation, icons, and translations. Package: nuitka Version: 0.5.28.2+ds-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 3521 Depends: neurodebian-popularity-contest, gcc (>= 5.0) | g++ (>= 4.4) | clang (>= 3.0), scons (>= 2.0.0), python-appdirs | base-files (<< 7.2), python3-appdirs | base-files (<< 7.2), python-dev (>= 2.6.6-2), python (>= 2.7.1-0ubuntu2) Recommends: python-lxml (>= 2.3), python-pyqt5, strace, chrpath Suggests: ccache Homepage: http://nuitka.net Priority: optional Section: python Filename: pool/main/n/nuitka/nuitka_0.5.28.2+ds-1~nd12.04+1_all.deb Size: 853172 SHA256: ed82ad3d4891e07b4e5a176c2e4baeebb40191e993655aeff0c294ee2b1b9732 SHA1: df3c4f397da38e7a79c88802a5db9bbba8a12aba MD5sum: e6e648193941d139eee63282f7838ea9 Description: Python compiler with full language support and CPython compatibility This Python compiler achieves full language compatibility and compiles Python code into compiled objects that are not second class at all. Instead they can be used in the same way as pure Python objects. Package: opensesame Version: 0.27.4-2~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 26639 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0), python-qt4, python-pygame (>= 1.8.1~), python-numpy (>= 1.3.0~), python-qscintilla2, gnome-icon-theme Recommends: python-serial (>= 2.3~), psychopy (>= 1.64.0), python-pyaudio (>= 0.2.4), python-imaging (>= 1.1.7), python-opengl (>= 3.0.1), expyriment (>= 0.5.2), ipython-qtconsole (>= 0.12), python-markdown Homepage: http://www.cogsci.nl/software/opensesame Priority: extra Section: science Filename: pool/main/o/opensesame/opensesame_0.27.4-2~nd12.04+1_all.deb Size: 25359348 SHA256: f1470d55899db30eb48bb5a9de4dca539f7b11796aa735c50ab406aa86c0fbec SHA1: e6e5bf7af41ad35096476278ac7cf91ad71014a5 MD5sum: 0e776cb5535a5b24713de386c14646c3 Description: graphical experiment builder for the social sciences This graphical environment provides an easy to use, point-and-click interface for creating psychological experiments. In addition to a powerful sketchpad for creating visual stimuli, OpenSesame features a sampler and synthesizer for sound playback. For more complex tasks, OpenSesame supports Python scripting using the built-in editor with syntax highlighting. Package: openstack-pkg-tools Version: 52~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 208 Depends: neurodebian-popularity-contest, autopkgtest, libxml-xpath-perl, madison-lite, pristine-tar Priority: extra Section: devel Filename: pool/main/o/openstack-pkg-tools/openstack-pkg-tools_52~nd12.04+1_all.deb Size: 59610 SHA256: 9440ff4ed43bf3ac89b50d2e29f8047de2802d840b6ab149892be16b5c3eb0cb SHA1: a1e0ed9e61669700ce403a3bd989a5f14d51e72e MD5sum: cc126d9966c87231fd053b0eeba7600f Description: Tools and scripts for building Openstack packages in Debian This package contains some useful shell scripts and helpers for building the Openstack packages in Debian, including: . * shared code for maintainer scripts (.config, .postinst, ...). * init script templates to automatically generate init scripts for sysv-rc, systemd and upstart. * tools to build backports using sbuild and/or Jenkins based on gbp workflow. * utility to maintain git packaging (to be included in a debian/rules). . Even if this package is maintained in order to build OpenStack packages, it is of a general purpose, and it can be used for building any package. Package: openvibe-data Source: openvibe Version: 0.14.3+dfsg2-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 9328 Depends: neurodebian-popularity-contest Homepage: http://openvibe.inria.fr Priority: extra Section: science Filename: pool/main/o/openvibe/openvibe-data_0.14.3+dfsg2-1~nd12.04+1_all.deb Size: 2024428 SHA256: e7be5d76d8705af09254195c6a5322019829604d6384e803e696e2d34dcf2fb6 SHA1: 408f561a02bfdbb352758df3ff54fd65283bf5fa MD5sum: 4f3c8f65f2b3324b27321c5115acd5c1 Description: Software platform for BCI (Data files) OpenViBE enables to design, test and use Brain-Computer Interfaces (BCI). OpenViBE is a software for real-time neurosciences (that is, for real-time processing of brain signals). It can be used to acquire, filter, process, classify and visualize brain signals in real time. . The graphical user interface of OpenViBE is simple to access and very easy to use for creating BCI scenarios and saving them for later use. In the designer, the available functions are listed in the right-hand window. The user simply drags and drops the selected functions in the left-hand window. He can then connect boxes together to add processing steps to the scenario being created. Lastly, the application is started by pressing the Play button to run the BCI. . OpenViBE is a library of functions written in C++ which can be integrated and applied quickly and easily using modules. The platform's main advantages are modularity, portability, availability of different tools for different types of user, including programmers and non-programmers, superior code performance and compatibility with virtual reality technologies. . The software also offers many 2D and 3D visualization tools to represent brain activity in real time. It is compatible with many EEG- and MEG-type machines because of its generic acquisition server. . OpenViBE offers many pre-configured scenarios for different applications including mental imagery, neurofeedback, P300 signals, etc... . This package contains the data files. Package: packaging-tutorial Version: 0.8~nd0 Architecture: all Maintainer: Lucas Nussbaum Installed-Size: 1550 Priority: extra Section: doc Filename: pool/main/p/packaging-tutorial/packaging-tutorial_0.8~nd0_all.deb Size: 1488332 SHA256: 491bc5917f698fee06888998e8a295a6caac2950148bb160b457aff72437eadb SHA1: c5d75d04b01f681ead660ce8d8fe068ab887fba0 MD5sum: 8fbf7c362fd4091a78c50404eb694402 Description: introduction to Debian packaging This tutorial is an introduction to Debian packaging. It teaches prospective developers how to modify existing packages, how to create their own packages, and how to interact with the Debian community. In addition to the main tutorial, it includes three practical sessions on modifying the 'grep' package, and packaging the 'gnujump' game and a Java library. Package: patool Version: 1.7-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 162 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8) Recommends: file Suggests: arj, bzip2 | lbzip2 | pbzip2, cabextract | lcab, ncompress, cpio | bsdcpio, lzop, p7zip-full, rar | unrar | unrar-nonfree, zip | unzip, rpm2cpio, binutils, lha, unace | unace-nonfree, arc | nomarch, unalz, lrzip (>= 0.551), tar (>= 1.26) | star | bsdtar, rzip, zoo, xdms, orange, lzip | plzip | clzip | pdlzip, sharutils, flac, shorten, unadf, archmage, genisoimage, python-argcomplete Homepage: http://wummel.github.io/patool/ Priority: optional Section: utils Filename: pool/main/p/patool/patool_1.7-1~nd12.04+1_all.deb Size: 33464 SHA256: a020224510249b13b4a02735b89ba8a6c6173d5e1a2ee90ab6f35d5ae7825252 SHA1: acd758c17020754791dfea9f8b516c09a5fffd2c MD5sum: 10efd2603be746cfe0817fa34de4f8cc Description: command line archive file manager Various archive formats can be created, extracted, tested, listed, compared, searched and repacked by patool. The archive format is determined with file(1) and as a fallback by the archive file extension. . patool supports 7z (.7z), ACE (.ace), ADF (.adf), ALZIP (.alz), AR (.a), ARC (.arc), ARJ (.arj), BZIP2 (.bz2), CAB (.cab), compress (.Z), CPIO (.cpio), DEB (.deb), DMS (.dms), FLAC (.flac), GZIP (.gz), ISO (.iso), LZH (.lha, .lzh), LZIP (.lz), LZMA (.lzma), LZOP (.lzo), RAR (.rar), RPM (.rpm), RZIP (.rz), SHAR (.shar), SHN (.shn), TAR (.tar), XZ (.xz), ZIP (.zip, .jar) and ZOO (.zoo) formats. . It relies on helper applications to handle those archive formats (for example bzip2 for BZIP2 archives). . The archive formats TAR, ZIP, BZIP2 and GZIP are supported natively and do not require helper applications to be installed. Package: psychopy Version: 1.77.02.dfsg-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 9277 Depends: neurodebian-popularity-contest, python (>= 2.4), python-support (>= 0.90.0), python-pyglet | python-pygame, python-opengl, python-numpy, python-scipy, python-matplotlib, python-lxml, python-configobj Recommends: python-wxgtk2.8, python-pyglet, python-pygame, python-openpyxl, python-imaging, python-serial, python-pyo, libavbin0, libxxf86vm1, ipython Suggests: python-iolabs, python-pyxid Homepage: http://www.psychopy.org Priority: optional Section: science Filename: pool/main/p/psychopy/psychopy_1.77.02.dfsg-1~nd12.04+1_all.deb Size: 5822196 SHA256: a2fa6db3af44f641097903239b83aebe087d20b59eed43d61ba9b127a44a88fc SHA1: d865f582d38f1c11b35156f3f41b6ecec22933d9 MD5sum: 8cd3467fd7011ba23807de9fceaf69a2 Description: environment for creating psychology stimuli in Python PsychoPy provides an environment for creating psychology stimuli using Python scripting language. It combines the graphical strengths of OpenGL with easy Python syntax to give psychophysics a free and simple stimulus presentation and control package. . The goal is to provide, for the busy scientist, tools to control timing and windowing and a simple set of pre-packaged stimuli and methods. PsychoPy features . - IDE GUI for coding in a powerful scripting language (Python) - Builder GUI for rapid development of stimulation sequences - Use of hardware-accelerated graphics (OpenGL) - Integration with Spectrascan PR650 for easy monitor calibration - Simple routines for staircase and constant stimuli experimental methods as well as curve-fitting and bootstrapping - Simple (or complex) GUIs via wxPython - Easy interfaces to joysticks, mice, sound cards etc. via PyGame - Video playback (MPG, DivX, AVI, QuickTime, etc.) as stimuli Python-Version: 2.7 Package: psychtoolbox-3-common Source: psychtoolbox-3 Version: 3.0.11.20140816.dfsg1-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 58457 Depends: neurodebian-popularity-contest Recommends: subversion Suggests: gnuplot Homepage: http://psychtoolbox.org Priority: extra Section: science Filename: pool/main/p/psychtoolbox-3/psychtoolbox-3-common_3.0.11.20140816.dfsg1-1~nd12.04+1_all.deb Size: 24807424 SHA256: 7415a3d2ed5e5e58130ae8911e0ba8c2ef8372290e9aca80bd7e6213a5975759 SHA1: a9cfbff2df6426c1fcd8e860c5a56df9987d702c MD5sum: e6ef14fca892250ed00eed5d116f21dc Description: toolbox for vision research -- arch/interpreter independent part Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains architecture independent files (such as .m scripts) Package: python-brian Source: brian Version: 1.4.1-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2336 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0), python-brian-lib (>= 1.4.1-1~nd12.04+1), python-matplotlib (>= 0.90.1), python-numpy (>= 1.3.0), python-scipy (>= 0.7.0) Recommends: python-sympy Suggests: python-brian-doc, python-nose, python-cherrypy Homepage: http://www.briansimulator.org/ Priority: extra Section: python Filename: pool/main/b/brian/python-brian_1.4.1-1~nd12.04+1_all.deb Size: 549166 SHA256: 541e11301a9398f8d77338a51a61ad3ef7f6a40327e22ce9c56bbf766edd3215 SHA1: fb52fa438a689e0cc10560357dfbf34551a705b7 MD5sum: 5db98c4eeb1c8d00fe730309b10daad3 Description: simulator for spiking neural networks Brian is a clock-driven simulator for spiking neural networks. It is designed with an emphasis on flexibility and extensibility, for rapid development and refinement of neural models. Neuron models are specified by sets of user-specified differential equations, threshold conditions and reset conditions (given as strings). The focus is primarily on networks of single compartment neuron models (e.g. leaky integrate-and-fire or Hodgkin-Huxley type neurons). Features include: - a system for specifying quantities with physical dimensions - exact numerical integration for linear differential equations - Euler, Runge-Kutta and exponential Euler integration for nonlinear differential equations - synaptic connections with delays - short-term and long-term plasticity (spike-timing dependent plasticity) - a library of standard model components, including integrate-and-fire equations, synapses and ionic currents - a toolbox for automatically fitting spiking neuron models to electrophysiological recordings Package: python-brian-doc Source: brian Version: 1.4.1-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 6799 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-brian Homepage: http://www.briansimulator.org/ Priority: extra Section: doc Filename: pool/main/b/brian/python-brian-doc_1.4.1-1~nd12.04+1_all.deb Size: 2245652 SHA256: 2fbc7a93c51dfc29fc312bbbca9a70d0c9aca014f7af0a07c826e6781bc8564f SHA1: d297cb4e18f5c07737ba4c3e04697f280cda222a MD5sum: 2ac50e95d6831462dbfe81fd85cb0d33 Description: simulator for spiking neural networks - documentation Brian is a clock-driven simulator for spiking neural networks. . This package provides user's manual (in HTML format), examples and demos. Package: python-dicom Source: pydicom Version: 0.9.9-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1553 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8) Recommends: python-numpy, python-imaging Suggests: python-matplotlib Homepage: http://pydicom.org/ Priority: optional Section: python Filename: pool/main/p/pydicom/python-dicom_0.9.9-1~nd12.04+1_all.deb Size: 427520 SHA256: 9901b7b5e8cff11cae526bfd07d4e094422fce883b6bea1f375cb513bf22dfae SHA1: d9e0aa0594f1266ee29d0b741ed10e742184e4eb MD5sum: 32694fab442d6f0f4822fd026c4bd1c5 Description: DICOM medical file reading and writing pydicom is a pure Python module for parsing DICOM files. DICOM is a standard (http://medical.nema.org) for communicating medical images and related information such as reports and radiotherapy objects. . pydicom makes it easy to read DICOM files into natural pythonic structures for easy manipulation. Modified datasets can be written again to DICOM format files. Package: python-dipy Source: dipy Version: 0.8.0-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4544 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-numpy, python-scipy, python-dipy-lib (>= 0.8.0-1~nd12.04+1) Recommends: python-matplotlib, python-vtk, python-nose, python-nibabel, python-tables Suggests: ipython Provides: python2.7-dipy Homepage: http://nipy.org/dipy Priority: optional Section: python Filename: pool/main/d/dipy/python-dipy_0.8.0-1~nd12.04+1_all.deb Size: 2477868 SHA256: d3f22b07559d9bb0fe55aabd212accc6da4a5f678d749c30e996eb47c6a9fee8 SHA1: 9811c0a76ffb0de1c19e41e1d505d7d125514071 MD5sum: c70227185f5f964004f7f4b08e225c6a Description: toolbox for analysis of MR diffusion imaging data Dipy is a toolbox for the analysis of diffusion magnetic resonance imaging data. It features: - Reconstruction algorithms, e.g. GQI, DTI - Tractography generation algorithms, e.g. EuDX - Intelligent downsampling of tracks - Ultra fast tractography clustering - Resampling datasets with anisotropic voxels to isotropic - Visualizing multiple brains simultaneously - Finding track correspondence between different brains - Warping tractographies into another space, e.g. MNI space - Reading many different file formats, e.g. Trackvis or NIfTI - Dealing with huge tractographies without memory restrictions - Playing with datasets interactively without storing Python-Version: 2.7 Package: python-dipy-doc Source: dipy Version: 0.8.0-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 11656 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-dipy Homepage: http://nipy.org/dipy Priority: optional Section: doc Filename: pool/main/d/dipy/python-dipy-doc_0.8.0-1~nd12.04+1_all.deb Size: 10326314 SHA256: 47ed73be83f71d24b0ef901652e12cdb8364a3941dbef5a02c89966bee1464d0 SHA1: ba8226d0cb723d879430292dbf266f5a688ced27 MD5sum: bc8f4f7535f8d3bbf2cc2cd1b3dd2ff6 Description: toolbox for analysis of MR diffusion imaging data -- documentation Dipy is a toolbox for the analysis of diffusion magnetic resonance imaging data. . This package provides the documentation in HTML format. Package: python-expyriment Version: 0.7.0+git34-g55a4e7e-3~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2572 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-support (>= 0.90.0), python-pygame (>= 1.9.1~), python-opengl (>= 3.0.0), ttf-freefont, libjs-jquery, libjs-underscore Recommends: python-serial (>= 2.5~), python-numpy (>= 1.3.0~) Suggests: python-parallel (>= 0.2), python-pyxid Homepage: http://www.expyriment.org Priority: optional Section: science Filename: pool/main/p/python-expyriment/python-expyriment_0.7.0+git34-g55a4e7e-3~nd12.04+1_all.deb Size: 843888 SHA256: 311cda12f25f6c95488349e1b8a24978ba85058b3ddc5e1c5fe69cfd17ed9535 SHA1: 92771e0982d4ff4b7e962f32f8254649356c89bf MD5sum: f6bc916fccff48b9a219a57979a0af4b Description: Python library for cognitive and neuroscientific experiments Expyriment is a light-weight Python library for designing and conducting timing-critical behavioural and neuroimaging experiments. The major goal is to provide a well-structured Python library for a script-based experiment development with a high priority on the readability of the resulting programme code. Due to the availability of an Android runtime environment, Expyriment is also suitable for the development of experiments running on tablet PCs or smart-phones. Package: python-joblib Source: joblib Version: 0.8.4-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 265 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8) Recommends: python-numpy, python-nose, python-simplejson Homepage: http://packages.python.org/joblib/ Priority: optional Section: python Filename: pool/main/j/joblib/python-joblib_0.8.4-1~nd12.04+1_all.deb Size: 75874 SHA256: 7103f748061e28d1be3d63ed8deac21aefbcb65f77a7b0d35f6547039035ffd5 SHA1: 35a25bfcbd733d09d9249bac2099bf6739645542 MD5sum: 7a192c0f4dfc7c6b34a5d1d72b30f008 Description: tools to provide lightweight pipelining in Python Joblib is a set of tools to provide lightweight pipelining in Python. In particular, joblib offers: . - transparent disk-caching of the output values and lazy re-evaluation (memoize pattern) - easy simple parallel computing - logging and tracing of the execution . Joblib is optimized to be fast and robust in particular on large, long-running functions and has specific optimizations for numpy arrays. . This package contains the Python 2 version. Package: python-lazyarray Source: lazyarray Version: 0.1.0-1~nd11.10+1+nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 17 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-numpy Homepage: http://bitbucket.org/apdavison/lazyarray/ Priority: optional Section: python Filename: pool/main/l/lazyarray/python-lazyarray_0.1.0-1~nd11.10+1+nd12.04+1_all.deb Size: 7346 SHA256: 119a709e7c8d3e6452027994781665214ff7df777b409d2ecfbbbf805c1c6240 SHA1: ca46afca4f6d4e692a37427d5a85d3eb2f6f2c86 MD5sum: 69478e3c00645627a84e5b965942f006 Description: Python module providing a NumPy-compatible lazily-evaluated array The 'larray' class is a NumPy-compatible numerical array where operations on the array (potentially including array construction) are not performed immediately, but are delayed until evaluation is specifically requested. Evaluation of only parts of the array is also possible. Consequently, use of an 'larray' can potentially save considerable computation time and memory in cases where arrays are used conditionally, or only parts of an array are used (for example in distributed computation, in which each MPI node operates on a subset of the elements of the array). Package: python-mdp Source: mdp Version: 3.3+git19-g4ec2f29-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1519 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-numpy Recommends: python-scipy, python-libsvm, python-joblib, python-scikits-learn | python-sklearn, python-pp Suggests: python-py, shogun-python-modular Enhances: python-mvpa Homepage: http://mdp-toolkit.sourceforge.net/ Priority: optional Section: python Filename: pool/main/m/mdp/python-mdp_3.3+git19-g4ec2f29-1~nd12.04+1_all.deb Size: 494710 SHA256: 82f2db11d8a5fb6883cbdd6f1f770689f6102e9cfee5853698d72fbc67a1a0d0 SHA1: aad1a61c4ea113b5faa25b87a0c1420f850b3139 MD5sum: a8a0236edb716a880f6dfd4a9a38feae Description: Modular toolkit for Data Processing Python data processing framework for building complex data processing software by combining widely used machine learning algorithms into pipelines and networks. Implemented algorithms include: Principal Component Analysis (PCA), Independent Component Analysis (ICA), Slow Feature Analysis (SFA), Independent Slow Feature Analysis (ISFA), Growing Neural Gas (GNG), Factor Analysis, Fisher Discriminant Analysis (FDA), and Gaussian Classifiers. . This package contains MDP for Python 2. Package: python-mne Version: 0.10.1+dfsg-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 9183 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-numpy, python-scipy, python-sklearn, python-matplotlib, python-joblib (>= 0.4.5), xvfb, xauth, libgl1-mesa-dri, help2man, libjs-jquery, libjs-jquery-ui Recommends: python-nose, mayavi2 Suggests: python-dap, ipython Provides: python2.7-mne Homepage: http://martinos.org/mne Priority: optional Section: python Filename: pool/main/p/python-mne/python-mne_0.10.1+dfsg-1~nd12.04+1_all.deb Size: 4789066 SHA256: efd7ff3e987045fb83cdae6949a80a43910cc37645f654ff1737e1791dcb6e3a SHA1: 1db496cd84e3c75bdd7698cd8e3c0cbe9c4c5727 MD5sum: f0980277325d1119c9edc74a2c81b7d5 Description: Python modules for MEG and EEG data analysis This package is designed for sensor- and source-space analysis of MEG and EEG data, including frequency-domain and time-frequency analyses and non-parametric statistics. Package: python-mpi4py-doc Source: mpi4py Version: 1.3.1+hg20131106-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 256 Depends: neurodebian-popularity-contest, libjs-sphinxdoc (>= 1.0) Suggests: python-mpi4py Homepage: http://code.google.com/p/mpi4py/ Priority: extra Section: doc Filename: pool/main/m/mpi4py/python-mpi4py-doc_1.3.1+hg20131106-1~nd12.04+1_all.deb Size: 73138 SHA256: 5a6648106b1153f5e45eb3d2862bbaba49e8feb3764c80efab1b4de286b9154b SHA1: 146c1191ceca4fcdfd65002d3395060801b7a1e8 MD5sum: 446a236918f70c055852fbc34e2773da Description: bindings of the MPI standard -- documentation MPI for Python (mpi4py) provides bindings of the Message Passing Interface (MPI) standard for the Python programming language, allowing any Python program to exploit multiple processors. . mpi4py is constructed on top of the MPI-1/MPI-2 specification and provides an object oriented interface which closely follows MPI-2 C++ bindings. It supports point-to-point (sends, receives) and collective (broadcasts, scatters, gathers) communications of any picklable Python object as well as optimized communications of Python object exposing the single-segment buffer interface (NumPy arrays, builtin bytes/string/array objects). . This package provides HTML rendering of the user's manual. Package: python-mvpa Source: pymvpa Version: 0.4.8-1~nd11.10+1+nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 3547 Depends: neurodebian-popularity-contest, python (>= 2.5), python-numpy, python-support (>= 0.90.0), python2.7, python-mvpa-lib (>= 0.4.8-1~nd11.10+1+nd12.04+1) Recommends: python-nifti, python-psyco, python-mdp, python-scipy, shogun-python-modular, python-pywt, python-matplotlib, python-reportlab Suggests: fslview, fsl, python-nose, python-lxml, python-openopt, python-rpy, python-mvpa-doc Provides: python2.7-mvpa Homepage: http://www.pymvpa.org Priority: optional Section: python Filename: pool/main/p/pymvpa/python-mvpa_0.4.8-1~nd11.10+1+nd12.04+1_all.deb Size: 2205054 SHA256: 157565eb22e6a64cca8e7b9369dccf884a44fd2b483184b2f9740d4818cc3f3d SHA1: 522691bdde24041e16a7feadd234cc1866586da4 MD5sum: 2f14582aa4fdd1736736b78e7026ef43 Description: multivariate pattern analysis with Python PyMVPA eases pattern classification analyses of large datasets, with an accent on neuroimaging. It provides high-level abstraction of typical processing steps (e.g. data preparation, classification, feature selection, generalization testing), a number of implementations of some popular algorithms (e.g. kNN, GNB, Ridge Regressions, Sparse Multinomial Logistic Regression), and bindings to external machine learning libraries (libsvm, shogun). . While it is not limited to neuroimaging data (e.g. fMRI, or EEG) it is eminently suited for such datasets. Python-Version: 2.7 Package: python-mvpa-doc Source: pymvpa Version: 0.4.8-1~nd11.10+1+nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 37578 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-mvpa Homepage: http://www.pymvpa.org Priority: optional Section: doc Filename: pool/main/p/pymvpa/python-mvpa-doc_0.4.8-1~nd11.10+1+nd12.04+1_all.deb Size: 8480396 SHA256: 0b362f8c219e02d176900b865bc51b26b54f6350eacf1d66bcae93a48b3415ff SHA1: eaafef89dd957e059ad348d1038e565c8ecf0db8 MD5sum: 0bee5fc34f30a40bb7a1e3b88f187d5b Description: documentation and examples for PyMVPA PyMVPA documentation in various formats (HTML, TXT) including * User manual * Developer guidelines * API documentation * BibTeX references file . Additionally, all example scripts shipped with the PyMVPA sources are included. Package: python-mvpa2 Source: pymvpa2 Version: 2.6.0-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 8794 Depends: neurodebian-popularity-contest, python (<< 2.8), python (>= 2.7.1-0ubuntu2), python-numpy, python2.7, python-mvpa2-lib (>= 2.6.0-1~nd12.04+1) Recommends: python-h5py, python-lxml, python-matplotlib, python-mdp, python-nibabel, python-nipy, python-psutil, python-psyco, python-pywt, python-reportlab, python-scipy, python-sklearn, python-shogun, liblapack-dev, python-pprocess, python-statsmodels, python-joblib, python-duecredit Suggests: fslview, fsl, python-mvpa2-doc, python-nose, python-openopt, python-rpy2 Provides: python2.7-mvpa2 Homepage: http://www.pymvpa.org Priority: optional Section: python Filename: pool/main/p/pymvpa2/python-mvpa2_2.6.0-1~nd12.04+1_all.deb Size: 5356928 SHA256: 861a7097673ea6b5ee7dbbd1c107e09481b54d31cd9ae896f0666630e6c22e0b SHA1: aa0c63d5d04b0381d912604d103ad57527887372 MD5sum: b068b8bb402fbe6f824f5039dc04595b Description: multivariate pattern analysis with Python v. 2 PyMVPA eases pattern classification analyses of large datasets, with an accent on neuroimaging. It provides high-level abstraction of typical processing steps (e.g. data preparation, classification, feature selection, generalization testing), a number of implementations of some popular algorithms (e.g. kNN, Ridge Regressions, Sparse Multinomial Logistic Regression), and bindings to external machine learning libraries (libsvm, shogun). . While it is not limited to neuroimaging data (e.g. fMRI, or EEG) it is eminently suited for such datasets. . This is a package of PyMVPA v.2. Previously released stable version is provided by the python-mvpa package. Python-Version: 2.7 Package: python-mvpa2-doc Source: pymvpa2 Version: 2.6.0-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 31225 Depends: neurodebian-popularity-contest, libjs-jquery, libjs-underscore Suggests: python-mvpa2, python-mvpa2-tutorialdata, ipython-notebook Homepage: http://www.pymvpa.org Priority: optional Section: doc Filename: pool/main/p/pymvpa2/python-mvpa2-doc_2.6.0-1~nd12.04+1_all.deb Size: 7613492 SHA256: 4b8196280f8a605a2d174e16512a6d7950ec3379af1c82b2031841757f33f627 SHA1: 7e9668cc15df77b34c7970ad7df12ac4380746f1 MD5sum: 9b9259e7de056c686da2f4bccc609768 Description: documentation and examples for PyMVPA v. 2 This is an add-on package for the PyMVPA framework. It provides a HTML documentation (tutorial, FAQ etc.), and example scripts. In addition the PyMVPA tutorial is also provided as IPython notebooks. Package: python-neo Source: neo Version: 0.3.3-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2913 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-numpy (>= 1:1.3~), python-quantities (>= 0.9.0~) Recommends: python-scipy (>= 0.8~), python-tables (>= 2.2~), libjs-jquery, libjs-underscore Suggests: python-nose Homepage: http://neuralensemble.org/trac/neo Priority: extra Section: python Filename: pool/main/n/neo/python-neo_0.3.3-1~nd12.04+1_all.deb Size: 1503776 SHA256: add43fa2e0a4063c13d7e3f2462c5e83f59a5cf1ef085526d269b3e0416be216 SHA1: 3298696bd6787d553c4f4982dc5b7d816890cf8b MD5sum: 0cc22ad76d83f6c31d25fb1db0b233da Description: Python IO library for electrophysiological data formats NEO stands for Neural Ensemble Objects and is a project to provide common classes and concepts for dealing with electro-physiological (in vivo and/or simulated) data to facilitate collaborative software/algorithm development. In particular Neo provides: a set a classes for data representation with precise definitions, an IO module with a simple API, documentation, and a set of examples. . NEO offers support for reading data from numerous proprietary file formats (e.g. Spike2, Plexon, AlphaOmega, BlackRock, Axon), read/write support for various open formats (e.g. KlustaKwik, Elan, WinEdr, WinWcp, PyNN), as well as support common file formats, such as HDF5 with Neo-structured content (NeoHDF5, NeoMatlab). . Neo's IO facilities can be seen as a pure-Python and open-source Neuroshare replacement. Package: python-neurosynth Source: neurosynth Version: 0.3-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 83 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-numpy, python-scipy, python-nibabel, python-ply Recommends: python-nose, fsl-mni152-templates Suggests: python-testkraut Homepage: http://neurosynth.org Priority: extra Section: python Filename: pool/main/n/neurosynth/python-neurosynth_0.3-1~nd12.04+1_all.deb Size: 32524 SHA256: 27b0be2cf8a587add547129ac1dda06a3b91425c3424fe158a65e1f9d4b2ed65 SHA1: 3a483f8f8559a01e10bd69466f6cb3a5c424ad57 MD5sum: 0f1cd4f35fbab87210af56d863cb5631 Description: large-scale synthesis of functional neuroimaging data NeuroSynth is a platform for large-scale, automated synthesis of functional magnetic resonance imaging (fMRI) data extracted from published articles. This Python module at the moment provides functionality for processing the database of collected terms and spatial coordinates to generate associated spatial statistical maps. Package: python-nibabel Source: nibabel Version: 2.0.2-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 63402 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-numpy, python-scipy Recommends: python-dicom, python-fuse Suggests: python-nibabel-doc Homepage: http://nipy.sourceforge.net/nibabel Priority: extra Section: python Filename: pool/main/n/nibabel/python-nibabel_2.0.2-1~nd12.04+1_all.deb Size: 2379380 SHA256: 3bae8ac24410a485cd0137e2deec316ca80f9d867a52ab57cb66e402490f8838 SHA1: c15a72903330c85207476ad84d90db26e2e21bf0 MD5sum: 61d367c982093dd38f7ad748cd844bef Description: Python bindings to various neuroimaging data formats NiBabel provides read and write access to some common medical and neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI, NIfTI1, MINC, as well as PAR/REC. The various image format classes give full or selective access to header (meta) information and access to the image data is made available via NumPy arrays. NiBabel is the successor of PyNIfTI. . This package also provides a commandline tools: . - dicomfs - FUSE filesystem on top of a directory with DICOMs - nib-ls - 'ls' for neuroimaging files - parrec2nii - for conversion of PAR/REC to NIfTI images Package: python-nibabel-doc Source: nibabel Version: 2.0.2-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 5554 Depends: neurodebian-popularity-contest, libjs-jquery, libjs-mathjax Homepage: http://nipy.sourceforge.net/nibabel Priority: extra Section: doc Filename: pool/main/n/nibabel/python-nibabel-doc_2.0.2-1~nd12.04+1_all.deb Size: 3080218 SHA256: 07b682dbf9bed0996c5e20a725db9c803279895431fe70b87da336a5046f7a61 SHA1: 328485177aa0d0c744a24d1528ff8f6a36f26723 MD5sum: 87d9916a8107c6a6a21658d829a1cf0d Description: documentation for NiBabel NiBabel provides read and write access to some common medical and neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI, NIfTI1, MINC, as well as PAR/REC. The various image format classes give full or selective access to header (meta) information and access to the image data is made available via NumPy arrays. NiBabel is the successor of PyNIfTI. . This package provides the documentation in HTML format. Package: python-nipy Source: nipy Version: 0.4.1-2~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 3965 Depends: neurodebian-popularity-contest, python-numpy (>= 1:1.2), python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-scipy, python-nibabel, python-nipy-lib (>= 0.4.1-2~nd12.04+1) Recommends: python-matplotlib, mayavi2, python-sympy Suggests: python-mvpa Provides: python2.7-nipy Homepage: http://neuroimaging.scipy.org Priority: extra Section: python Filename: pool/main/n/nipy/python-nipy_0.4.1-2~nd12.04+1_all.deb Size: 979452 SHA256: 23576cfc21cd74b3a0a0cc7cdc15fec4039062c79e87f1afd0fb461d05316ab2 SHA1: 8ff8080ba9a6cd35574aab5550b22072108a1d00 MD5sum: 4fa5b7e8d7d1048fadab5533a90ffb8f Description: Analysis of structural and functional neuroimaging data NiPy is a Python-based framework for the analysis of structural and functional neuroimaging data. It provides functionality for - General linear model (GLM) statistical analysis - Combined slice time correction and motion correction - General image registration routines with flexible cost functions, optimizers and re-sampling schemes - Image segmentation - Basic visualization of results in 2D and 3D - Basic time series diagnostics - Clustering and activation pattern analysis across subjects - Reproducibility analysis for group studies Python-Version: 2.7 Package: python-nipy-doc Source: nipy Version: 0.4.1-2~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 10558 Depends: neurodebian-popularity-contest, libjs-jquery, libjs-underscore Recommends: python-nipy Homepage: http://neuroimaging.scipy.org Priority: extra Section: doc Filename: pool/main/n/nipy/python-nipy-doc_0.4.1-2~nd12.04+1_all.deb Size: 3935820 SHA256: 05f259b58600e3434ec392012b4e51721cd42c58bffbd7238f8cad6c80fe8dfb SHA1: b4eedb629780827fc652cd5453460d0bad7ea297 MD5sum: d7ccedc5e43f476276a957fdbe088c10 Description: documentation and examples for NiPy This package contains NiPy documentation in various formats (HTML, TXT) including * User manual * Developer guidelines * API documentation Package: python-nipype Source: nipype Version: 0.10.0-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4728 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-scipy, python-simplejson, python-traits (>= 4.0) | python-traits4, python-nibabel (>= 1.0.0~), python-networkx (>= 1.3), python-cfflib Recommends: ipython, python-nose, graphviz Suggests: fsl, afni, python-nipy, slicer, matlab-spm8, python-pyxnat, mne-python, elastix, ants Provides: python2.7-nipype Homepage: http://nipy.sourceforge.net/nipype/ Priority: optional Section: python Filename: pool/main/n/nipype/python-nipype_0.10.0-1~nd12.04+1_all.deb Size: 1391226 SHA256: 2a85c5baf68e05cd54ee25591f15a8cdd29570d814c6f866d3840cca789886a4 SHA1: a6476c32a3dc17be34d5edcf68481c6058fec10b MD5sum: e99734171ac03fca8d25e182bc835400 Description: Neuroimaging data analysis pipelines in Python Nipype interfaces Python to other neuroimaging packages and creates an API for specifying a full analysis pipeline in Python. Currently, it has interfaces for SPM, FSL, AFNI, Freesurfer, but could be extended for other packages (such as lipsia). Package: python-nipype-doc Source: nipype Version: 0.10.0-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 20518 Depends: neurodebian-popularity-contest, libjs-jquery, libjs-underscore Suggests: python-nipype Homepage: http://nipy.sourceforge.net/nipype/ Priority: optional Section: doc Filename: pool/main/n/nipype/python-nipype-doc_0.10.0-1~nd12.04+1_all.deb Size: 10688774 SHA256: e2b39edd2a5a3124c7bcc516f3d95a58d9fc4dbea827dcad289944ec0107e746 SHA1: ee3b8afc4367c1e64d0771870810d10c43cd1d0a MD5sum: 40463b2bab2ac02748603d47e57b89da Description: Neuroimaging data analysis pipelines in Python -- documentation Nipype interfaces Python to other neuroimaging packages and creates an API for specifying a full analysis pipeline in Python. Currently, it has interfaces for SPM, FSL, AFNI, Freesurfer, but could be extended for other packages (such as lipsia). . This package contains Nipype examples and documentation in various formats. Package: python-nitime Source: nitime Version: 0.5-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 9348 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0), python-numpy, python-scipy Recommends: python-matplotlib, python-nose, python-nibabel, python-networkx Homepage: http://nipy.org/nitime Priority: extra Section: python Filename: pool/main/n/nitime/python-nitime_0.5-1~nd12.04+1_all.deb Size: 3927928 SHA256: 93e0b850b28bb07bddddf4dd6c7fccf2b06dec2f852173743a8921a8895b955a SHA1: d91bc7fa8a3f6b18103c74a25ff8188fa18c1b4f MD5sum: 90f0cad9668aafa20a31a7f411ec6486 Description: timeseries analysis for neuroscience data (nitime) Nitime is a Python module for time-series analysis of data from neuroscience experiments. It contains a core of numerical algorithms for time-series analysis both in the time and spectral domains, a set of container objects to represent time-series, and auxiliary objects that expose a high level interface to the numerical machinery and make common analysis tasks easy to express with compact and semantically clear code. Package: python-nitime-doc Source: nitime Version: 0.5-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 7681 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-nitime Homepage: http://nipy.org/nitime Priority: extra Section: doc Filename: pool/main/n/nitime/python-nitime-doc_0.5-1~nd12.04+1_all.deb Size: 6059310 SHA256: b8ff6afbe12b9fc27c48a2882d4baf72aaabe79e4eafd09a8094e7587c0c7524 SHA1: e24e85faf44ccf12231c26f2b2541d9c473d43c6 MD5sum: 3e6b5e4c3a26fea9cce654ca37a5fae9 Description: timeseries analysis for neuroscience data (nitime) -- documentation Nitime is a Python module for time-series analysis of data from neuroscience experiments. . This package provides the documentation in HTML format. Package: python-numpydoc Source: numpydoc Version: 0.4-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 118 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-sphinx (>= 1.0.1) Suggests: python-matplotlib Homepage: https://github.com/numpy/numpy/tree/master/doc/sphinxext Priority: optional Section: python Filename: pool/main/n/numpydoc/python-numpydoc_0.4-1~nd12.04+1_all.deb Size: 30416 SHA256: f0ec6c6bb8bbf961ad97650bcdd1fe22fd339aae379cf0734062e2ad4e6db3e3 SHA1: e8213cba00b6930e0a7711398e1e1d69efe5837f MD5sum: c04cb18fa2d37487d90476988c1b5c66 Description: Sphinx extension to support docstrings in Numpy format This package defines several extensions for the Sphinx documentation system, shipped in the numpydoc Python package. In particular, these provide support for the Numpy docstring format in Sphinx. Package: python-openopt Source: openopt Version: 0.38+svn1589-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 954 Depends: neurodebian-popularity-contest, python (>= 2.5), python-support (>= 0.90.0), python-numpy Recommends: python-scipy, python-cvxopt, python-matplotlib, python-setproctitle Suggests: lp-solve Conflicts: python-scikits-openopt Replaces: python-scikits-openopt Provides: python2.7-openopt Homepage: http://www.openopt.org Priority: extra Section: python Filename: pool/main/o/openopt/python-openopt_0.38+svn1589-1~nd12.04+1_all.deb Size: 245070 SHA256: c6d2c1cf48ce88af0d065731ab604db6b11738340fa4bdcce47f2bc8ee4f255e SHA1: be29b8639736fec932e1186ecba123ac9885261b MD5sum: 8e53da6514861d3666b0b66f6db764c7 Description: Python module for numerical optimization Numerical optimization framework developed in Python which provides connections to lots of solvers with easy and unified OpenOpt syntax. Problems which can be tackled with OpenOpt * Linear Problem (LP) * Mixed-Integer Linear Problem (MILP) * Quadratic Problem (QP) * Non-Linear Problem (NLP) * Non-Smooth Problem (NSP) * Non-Linear Solve Problem (NLSP) * Least Squares Problem (LSP) * Linear Least Squares Problem (LLSP) * Mini-Max Problem (MMP) * Global Problem (GLP) . A variety of solvers is available (e.g. IPOPT, ALGENCAN). Python-Version: 2.7 Package: python-openpyxl Source: openpyxl Version: 1.7.0+ds1-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 452 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0) Recommends: python-nose, python-pil, python-imaging Homepage: http://bitbucket.org/ericgazoni/openpyxl/ Priority: optional Section: python Filename: pool/main/o/openpyxl/python-openpyxl_1.7.0+ds1-1~nd12.04+1_all.deb Size: 91924 SHA256: df53c2fd22e0d6dab54dc422a7274e819402d71c3075adcac4da592a3cf115f4 SHA1: 52b33535ac90c45003f670f8939588c6989368c1 MD5sum: 84ccc885fadf57a91ba6b4089a33b555 Description: module to read/write OpenXML xlsx/xlsm files Openpyxl is a pure Python module to read/write Excel 2007 (OpenXML) xlsx/xlsm files. Package: python-pandas Source: pandas Version: 0.14.1-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 8987 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-dateutil, python-tz, python-numpy (>= 1:1.6~), python-pandas-lib (>= 0.14.1-1~nd12.04+1), python-six Recommends: python-scipy, python-matplotlib, python-tables, python-numexpr, python-xlrd, python-statsmodels, python-openpyxl, python-xlwt, python-bs4, python-html5lib Suggests: python-pandas-doc Provides: python2.7-pandas Homepage: http://pandas.sourceforge.net Priority: optional Section: python Filename: pool/main/p/pandas/python-pandas_0.14.1-1~nd12.04+1_all.deb Size: 1666560 SHA256: 666a1aaa6801c94c1f48c7df9adf89eeca41a01aed7af0def857d293a7098ec3 SHA1: 061dc06342d9cae2f9ae0364ce00c39c2a4b1e2a MD5sum: 2da2c006d241f0f0e22eeeaa57fe3244 Description: data structures for "relational" or "labeled" data pandas is a Python package providing fast, flexible, and expressive data structures designed to make working with "relational" or "labeled" data both easy and intuitive. It aims to be the fundamental high-level building block for doing practical, real world data analysis in Python. pandas is well suited for many different kinds of data: . - Tabular data with heterogeneously-typed columns, as in an SQL table or Excel spreadsheet - Ordered and unordered (not necessarily fixed-frequency) time series data. - Arbitrary matrix data (homogeneously typed or heterogeneous) with row and column labels - Any other form of observational / statistical data sets. The data actually need not be labeled at all to be placed into a pandas data structure . This package contains the Python 2 version. Package: python-patsy Source: patsy Version: 0.4.1+git34-ga5b54c2-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 807 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-six, python-numpy Recommends: python-pandas, python-openpyxl Suggests: python-patsy-doc Homepage: http://github.com/pydata/patsy Priority: optional Section: python Filename: pool/main/p/patsy/python-patsy_0.4.1+git34-ga5b54c2-1~nd12.04+1_all.deb Size: 226854 SHA256: d8ead930040652ad38036f7feab979e76a79f6d6512748b2a9436475c3b3065e SHA1: 910781d6e03a769506168607bf3d0e5ee2cb0660 MD5sum: cb1960d28ada0ae8dc9953ea581b8598 Description: statistical models in Python using symbolic formulas patsy is a Python library for describing statistical models (especially linear models, or models that have a linear component) and building design matrices. . This package contains the Python 2 version. Package: python-patsy-doc Source: patsy Version: 0.4.1+git34-ga5b54c2-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1303 Depends: neurodebian-popularity-contest, libjs-jquery, libjs-underscore Suggests: python-patsy Homepage: http://github.com/pydata/patsy Priority: optional Section: doc Filename: pool/main/p/patsy/python-patsy-doc_0.4.1+git34-ga5b54c2-1~nd12.04+1_all.deb Size: 563772 SHA256: 982cb83c414dd8f329586d9659fc3d3972e5a36c71d38cddbdb52dff6f63bc91 SHA1: 0b6625cf6bf74afb85ce6cf1982bb6a5b66451cd MD5sum: 8039e39950fcdebc5a33c9827398f146 Description: documentation and examples for patsy This package contains documentation and example scripts for python-patsy. Package: python-pp Source: parallelpython Version: 1.6.2-2~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 119 Depends: neurodebian-popularity-contest, python, python-support (>= 0.90.0) Homepage: http://www.parallelpython.com/ Priority: optional Section: python Filename: pool/main/p/parallelpython/python-pp_1.6.2-2~nd12.04+1_all.deb Size: 34276 SHA256: ab62cec05fc9f0a9305943c5ff846339715c8c7dfe90329c84dcb579c387f522 SHA1: 34efa2eef021e6ee1a8ba277579f2a8b263b4d54 MD5sum: ff73261f718ab0f59e7f09c2c9513f39 Description: parallel and distributed programming toolkit for Python Parallel Python module (pp) provides an easy and efficient way to create parallel-enabled applications for SMP computers and clusters. pp module features cross-platform portability and dynamic load balancing. Thus application written with PP will parallelize efficiently even on heterogeneous and multi-platform clusters (including clusters running other application with variable CPU loads). Python-Version: 2.7 Package: python-pprocess Source: pprocess Version: 0.5-1+nd0~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 716 Depends: neurodebian-popularity-contest, python, python-support (>= 0.90.0) Homepage: http://www.boddie.org.uk/python/pprocess.html Priority: optional Section: python Filename: pool/main/p/pprocess/python-pprocess_0.5-1+nd0~nd12.04+1_all.deb Size: 108522 SHA256: 150e87b1234f7b33e25e39e54f2f1b8b81a30bdd113b67b68e8b711263327295 SHA1: 43d2a838de11235a0e0c73dd67681802be0fd348 MD5sum: 23cabb5dbc151eb7f1d0cdfac3fc24ed Description: elementary parallel programming for Python The pprocess module provides elementary support for parallel programming in Python using a fork-based process creation model in conjunction with a channel-based communications model implemented using socketpair and poll. On systems with multiple CPUs or multicore CPUs, processes should take advantage of as many CPUs or cores as the operating system permits. Python-Version: 2.7 Package: python-pyentropy Source: pyentropy Version: 0.4.1-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 73 Depends: neurodebian-popularity-contest, python, python-support (>= 0.90.0), python-numpy (>= 1.3) Recommends: python-scipy Suggests: python-nose Provides: python2.7-pyentropy Homepage: http://code.google.com/p/pyentropy Priority: extra Section: python Filename: pool/main/p/pyentropy/python-pyentropy_0.4.1-1~nd12.04+1_all.deb Size: 21328 SHA256: ddd9ba108b54448eea94d0ae6ea3ee5d64d53ddf5ce1a495b6d2cf3fcc3fb990 SHA1: 54e328922f69edc526dd9e4fee36c0a579751237 MD5sum: a54388c4f18d1e1d251afce2e209e3f1 Description: Python module for estimation information theoretic quantities A Python module for estimation of entropy and information theoretic quantities using cutting edge bias correction methods, such as * Panzeri-Treves (PT) * Quadratic Extrapolation (QE) * Nemenman-Shafee-Bialek (NSB) Python-Version: 2.7 Package: python-pyepl-common Source: pyepl Version: 1.1.0+git12-g365f8e3-2~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 813 Depends: neurodebian-popularity-contest, python Homepage: http://pyepl.sourceforge.net/ Priority: optional Section: python Filename: pool/main/p/pyepl/python-pyepl-common_1.1.0+git12-g365f8e3-2~nd12.04+1_all.deb Size: 818242 SHA256: a2bbd0b4134d2aae2b812dbde7714e73b029b13fa2b43f83b15ebdf0c6af78e8 SHA1: 213bf6d1e19704dea9aeac05a7860e42695d7256 MD5sum: ba4c40d75364bba40c3327e6faefbd79 Description: module for coding psychology experiments in Python PyEPL is a stimuli delivery and response registration toolkit to be used for generating psychology (as well as neuroscience, marketing research, and other) experiments. . It provides - presentation: both visual and auditory stimuli - responses registration: both manual (keyboard/joystick) and sound (microphone) time-stamped - sync-pulsing: synchronizing your behavioral task with external acquisition hardware - flexibility of encoding various experiments due to the use of Python as a description language - fast execution of critical points due to the calls to linked compiled libraries . This toolbox is here to be an alternative for a widely used commercial product E'(E-Prime) . This package provides common files such as images. Package: python-pynn Source: pynn Version: 0.7.5-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 763 Depends: neurodebian-popularity-contest, python (>= 2.5), python-support (>= 0.90.0) Recommends: python-jinja2, python-cheetah Suggests: python-neuron, python-brian, python-csa Homepage: http://neuralensemble.org/trac/PyNN Priority: extra Section: python Filename: pool/main/p/pynn/python-pynn_0.7.5-1~nd12.04+1_all.deb Size: 175770 SHA256: fe6e3032350714f860c4c2b7720692ef7ef01d69cb7b075d00f1b164f7ffe727 SHA1: 5a5347319df65e9930dae7e44ff885eeb610503f MD5sum: fa0cbb1bd44a13d0fe2bc52cac2ca0de Description: simulator-independent specification of neuronal network models PyNN allows for coding a model once and run it without modification on any simulator that PyNN supports (currently NEURON, NEST, PCSIM and Brian). PyNN translates standard cell-model names and parameter names into simulator-specific names. Package: python-pyxnat Source: pyxnat Version: 0.9.1+git39-g96bf069-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 862 Depends: neurodebian-popularity-contest, python-lxml, python-simplejson, python-httplib2 (>= 0.7.0) Recommends: python-networkx, python-matplotlib Homepage: http://packages.python.org/pyxnat/ Priority: extra Section: python Filename: pool/main/p/pyxnat/python-pyxnat_0.9.1+git39-g96bf069-1~nd12.04+1_all.deb Size: 190346 SHA256: 251e5eee918d64f1c8bf4cd4c1e155433e42d04c034ff9c9abda5633ff611f6c SHA1: 5e173439a42b6c0d59cb373bb402c6e1868df3f1 MD5sum: c4c2961165b4dc02a1c076d63045e85b Description: Interface to access neuroimaging data on XNAT servers pyxnat is a simple Python library that relies on the REST API provided by the XNAT platform since its 1.4 version. XNAT is an extensible database for neuroimaging data. The main objective is to ease communications with an XNAT server to plug-in external tools or Python scripts to process the data. It features: . - resources browsing capabilities - read and write access to resources - complex searches - disk-caching of requested files and resources Package: python-quantities Version: 0.10.1-1~nd11.10+1+nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 301 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-numpy (>= 1.4) Homepage: http://packages.python.org/quantities/ Priority: extra Section: python Filename: pool/main/p/python-quantities/python-quantities_0.10.1-1~nd11.10+1+nd12.04+1_all.deb Size: 58804 SHA256: e8cc2d0a4d86512648fb8593ef8dbc22e198d5a23dba4290c2fad574a1705185 SHA1: db73d2cfddb1e9b6e19e5f8d674d94cb8b5f10b3 MD5sum: 34ca36fdfe957727bfb6967fddc589f5 Description: Library for computation of physical quantities with units, based on numpy Quantities is designed to handle arithmetic and conversions of physical quantities, which have a magnitude, dimensionality specified by various units, and possibly an uncertainty. Quantities builds on the popular numpy library and is designed to work with numpy ufuncs, many of which are already supported. Package: python-scikits-learn Source: scikit-learn Version: 0.14.1-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 35 Depends: neurodebian-popularity-contest, python-sklearn Homepage: http://scikit-learn.sourceforge.net Priority: optional Section: oldlibs Filename: pool/main/s/scikit-learn/python-scikits-learn_0.14.1-1~nd12.04+1_all.deb Size: 33362 SHA256: 31c13e1f5c69f6b3fe73a5b549f0dfad0389b1627872c7e4deef086fa3a7c0f2 SHA1: 96d688afd858bd8689f13c15e7d218c56a30f72a MD5sum: 8fb165ef8c3826a372ae84f0f8ff8636 Description: transitional compatibility package for scikits.learn -> sklearn migration Provides old namespace (scikits.learn) and could be removed if dependent code migrated to use sklearn for clarity of the namespace. Package: python-scikits.statsmodels Source: statsmodels Version: 0.5.0-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 9 Depends: neurodebian-popularity-contest, python-statsmodels Homepage: http://statsmodels.sourceforge.net/ Priority: extra Section: oldlibs Filename: pool/main/s/statsmodels/python-scikits.statsmodels_0.5.0-1~nd12.04+1_all.deb Size: 5644 SHA256: 81b2847e6dd356b960096d8852026279a697f0891afdabd75324771d35da4219 SHA1: 6595d21ccb1350359ca19e6f36cc653a4a917dec MD5sum: de7aad820573dd302128f9a240bf7245 Description: transitional compatibility package for statsmodels migration Provides old namespace (scikits.statsmodels) and could be removed if dependent code migrated to use statsmodels for clarity of the namespace. Package: python-skimage Source: skimage Version: 0.6.1-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 3641 Depends: neurodebian-popularity-contest, python (>= 2.6), python-numpy, python-support (>= 0.90.0), python2.7, python-scipy (>= 0.9), python-skimage-lib (>= 0.6.1-1~nd12.04+1), libfreeimage3 Recommends: python-nose, python-matplotlib (>= 1.0), python-imaging Suggests: python-skimage-doc, python-opencv Provides: python2.7-skimage Homepage: http://scikits-image.org Priority: optional Section: python Filename: pool/main/s/skimage/python-skimage_0.6.1-1~nd12.04+1_all.deb Size: 2539146 SHA256: b2d5c79f9c1219dcc1e7946d05c7c58a028485e0bcb1b00d73fd82a2fc8ce936 SHA1: c43d51b7b5ebc4d015d5a423853efacc091432fc MD5sum: 526222710563493309ed1208f5edc660 Description: Python modules for image processing scikits-image is a collection of image processing algorithms for Python. It performs tasks such as image loading, filtering, morphology, segmentation, color conversions, and transformations. Package: python-skimage-doc Source: skimage Version: 0.6.1-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4867 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-skimage Homepage: http://scikits-image.org Priority: optional Section: doc Filename: pool/main/s/skimage/python-skimage-doc_0.6.1-1~nd12.04+1_all.deb Size: 3591424 SHA256: 0e4f5f1b5ceb2c4a2eb1bd63d6f8c0a3729b53ca04d8a80d1a8e63e23dd5bd32 SHA1: 8e6083120069f5be3820340df0ceb062cfdf028e MD5sum: a1f61e601d45c9f39bd4ba98c54b6847 Description: Documentation and examples for scikits-image This package contains documentation and example scripts for python-skimage. Package: python-sklearn Source: scikit-learn Version: 0.14.1-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 3549 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-numpy, python-scipy, python-sklearn-lib (>= 0.14.1-1~nd12.04+1), python-joblib (>= 0.4.5) Recommends: python-nose, python-matplotlib Suggests: python-dap, python-scikits-optimization, python-sklearn-doc, ipython Enhances: python-mdp, python-mvpa2 Breaks: python-scikits-learn (<< 0.9~) Replaces: python-scikits-learn (<< 0.9~) Provides: python2.7-sklearn Homepage: http://scikit-learn.sourceforge.net Priority: optional Section: python Filename: pool/main/s/scikit-learn/python-sklearn_0.14.1-1~nd12.04+1_all.deb Size: 1103698 SHA256: 3fdeb6f83236eea97239fa8754795841a4d681684a669fecd85bb324a56c51b8 SHA1: c98a313238747adf136ae530f5a8767c0e2a7d65 MD5sum: 1727a0bae4724bbb05cd0f3b1cd88328 Description: Python modules for machine learning and data mining scikit-learn is a collection of Python modules relevant to machine/statistical learning and data mining. Non-exhaustive list of included functionality: - Gaussian Mixture Models - Manifold learning - kNN - SVM (via LIBSVM) Package: python-sklearn-doc Source: scikit-learn Version: 0.14.1-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 579 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-sklearn Conflicts: python-scikits-learn-doc Replaces: python-scikits-learn-doc Homepage: http://scikit-learn.sourceforge.net Priority: optional Section: doc Filename: pool/main/s/scikit-learn/python-sklearn-doc_0.14.1-1~nd12.04+1_all.deb Size: 190052 SHA256: 94fab5bf875e775b42d918e35328b2879c54e9ef48a8ad7ce123504e0fbf4d9b SHA1: 19e79dd551dd5424a152974f86285dace9111f53 MD5sum: 8aec872b9a6896364c724fa71f31a5ac Description: documentation and examples for scikit-learn This package contains documentation and example scripts for python-sklearn. Package: python-smmap Version: 0.9.0-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 69 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8) Suggests: python-nose Provides: python2.7-smmap Homepage: https://github.com/Byron/smmap Priority: extra Section: python Filename: pool/main/p/python-smmap/python-smmap_0.9.0-1~nd12.04+1_all.deb Size: 22380 SHA256: 257fa87528002899cf1b23d533c29d6856abbd017da85b993dc00e62afd9622a SHA1: 1bb3ec99f2935749e4e51ca41af4a6758eee30d1 MD5sum: 375252afcfea783e98bff22fe58dd291 Description: pure Python implementation of a sliding window memory map manager Smmap wraps an interface around mmap and tracks the mapped files as well as the amount of clients who use it. If the system runs out of resources, or if a memory limit is reached, it will automatically unload unused maps to allow continued operation. Package: python-spyderlib Source: spyder Version: 2.2.5+dfsg-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4009 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8), libjs-sphinxdoc (>= 1.0), libjs-jquery, libjs-mathjax, python-qt4 Recommends: ipython-qtconsole, pep8, pyflakes (>= 0.5.0), pylint, python-matplotlib, python-numpy, python-psutil (>= 0.3.0), python-rope, python-scipy, python-sphinx Suggests: tortoisehg, gitk Breaks: spyder (<< 2.0.12-1) Replaces: spyder (<< 2.0.12-1) Provides: python2.7-spyderlib Homepage: http://code.google.com/p/spyderlib/ Priority: extra Section: python Filename: pool/main/s/spyder/python-spyderlib_2.2.5+dfsg-1~nd12.04+1_all.deb Size: 1847796 SHA256: 535e0535482916fc7aba7f0dcf1c8157e8356cc99b058bd140b2a4d4cb46461e SHA1: 03089e8d82a56f592cf63b44f07d9a45c2ed187a MD5sum: f67e280dbee35a063496afd23bd7c956 Description: python IDE for scientists Originally written to design Spyder (the Scientific PYthon Development EnviRonment), the spyderlib Python library provides ready-to-use pure-Python widgets: source code editor with syntax highlighting and code introspection/analysis features, NumPy array editor, dictionary editor, Python console, etc. It's based on the Qt Python binding module PyQt4 (and is compatible with PySide since v2.2). Package: python-spykeutils Source: spykeutils Version: 0.4.3-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2117 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-scipy, python-quantities, python-neo (>= 0.2.1), python-nose, python-sphinx Recommends: python-guidata, python-guiqwt, python-tables, libjs-jquery, libjs-underscore, python-sklearn (>= 0.11), python-joblib (>= 0.4.5) Provides: python2.7-spykeutils Homepage: https://github.com/rproepp/spykeutils Priority: extra Section: python Filename: pool/main/s/spykeutils/python-spykeutils_0.4.3-1~nd12.04+1_all.deb Size: 407392 SHA256: 8bfa8738a20f928c20218181e649d1b4c315afc98e129d52ed95c6bd3a081e75 SHA1: 9d185ff233f2a17a8690fbfd31cf1d46ddd51401 MD5sum: db8be90544ec8ec674f4d79fe6bfe5d1 Description: utilities for analyzing electrophysiological data spykeutils is a Python library for analyzing and plotting data from neurophysiological recordings. It can be used by itself or in conjunction with Spyke Viewer, a multi-platform GUI application for navigating electrophysiological datasets. Package: python-statsmodels Source: statsmodels Version: 0.5.0-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 20309 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-numpy, python-scipy, python-statsmodels-lib (>= 0.5.0-1~nd12.04+1), python-patsy Recommends: python-pandas, python-matplotlib, python-nose, python-joblib Conflicts: python-scikits-statsmodels, python-scikits.statsmodels (<< 0.4) Replaces: python-scikits-statsmodels, python-scikits.statsmodels (<< 0.4) Provides: python2.7-statsmodels Homepage: http://statsmodels.sourceforge.net/ Priority: extra Section: python Filename: pool/main/s/statsmodels/python-statsmodels_0.5.0-1~nd12.04+1_all.deb Size: 4668824 SHA256: 0539430689364d488d46c8809c6b8c357e9dffdde7bd7c25473a39b585951192 SHA1: 4396bb38104c53d0e49fdde445a4bdc273481b75 MD5sum: 2fb758c0c8250d94f061224035432d36 Description: Python module for the estimation of statistical models statsmodels Python module provides classes and functions for the estimation of several categories of statistical models. These currently include linear regression models, OLS, GLS, WLS and GLS with AR(p) errors, generalized linear models for six distribution families and M-estimators for robust linear models. An extensive list of result statistics are available for each estimation problem. Package: python-statsmodels-doc Source: statsmodels Version: 0.5.0-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 29874 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-statsmodels Conflicts: python-scikits-statsmodels-doc, python-scikits.statsmodels-doc Replaces: python-scikits-statsmodels-doc, python-scikits.statsmodels-doc Homepage: http://statsmodels.sourceforge.net/ Priority: extra Section: doc Filename: pool/main/s/statsmodels/python-statsmodels-doc_0.5.0-1~nd12.04+1_all.deb Size: 7060402 SHA256: b797b9a6e9e601d739fb0b54a95681826916d2221ddf8fdff5e057af43a1a9a9 SHA1: 51df3b3e188e055010777e8d200f20c3f940c88c MD5sum: 5590937444cd73845f88b4f8a530a433 Description: documentation and examples for statsmodels This package contains HTML documentation and example scripts for python-statsmodels. Package: python-surfer Source: pysurfer Version: 0.7-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 250 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-nibabel, python-numpy, python-scipy, python-pil | python-imaging, mayavi2, python-argparse Recommends: mencoder Homepage: http://pysurfer.github.com Priority: extra Section: python Filename: pool/main/p/pysurfer/python-surfer_0.7-1~nd12.04+1_all.deb Size: 49608 SHA256: 14570b9df765393cb63a6ae4dba92e3fb6917ecc702a77790b719d4065fd5cbb SHA1: b15311cda8b5aaaf0447e95bf34b3ff1a171fb83 MD5sum: 1da9a31eef53150b1ae43ed6f58a18b5 Description: visualize Freesurfer's data in Python This is a Python package for visualization and interaction with cortical surface representations of neuroimaging data from Freesurfer. It extends Mayavi’s powerful visualization engine with a high-level interface for working with MRI and MEG data. . PySurfer offers both a command-line interface designed to broadly replicate Freesurfer’s Tksurfer program as well as a Python library for writing scripts to efficiently explore complex datasets. Python-Version: 2.7 Package: python-tz Version: 2012c-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 114 Depends: neurodebian-popularity-contest, tzdata, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8) Homepage: http://pypi.python.org/pypi/pytz/ Priority: optional Section: python Filename: pool/main/p/python-tz/python-tz_2012c-1~nd12.04+1_all.deb Size: 39076 SHA256: 5e5a0c4143db73704376f78d5393a8d2562d1090e1ce0971aa074845eb6c7365 SHA1: d587a5c518fc1e8cc2b100cbcfdfa5ef3130e89e MD5sum: 1f27dc834f8849b16c7551116a435410 Description: Python version of the Olson timezone database python-tz brings the Olson tz database into Python. This library allows accurate and cross platform timezone calculations using Python 2.3 or higher. It also solves the issue of ambiguous times at the end of daylight savings, which you can read more about in the Python Library Reference (datetime.tzinfo). Package: python3-datalad Source: datalad Version: 0.17.5-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4665 Depends: neurodebian-popularity-contest, git-annex (>= 8.20200309~) | git-annex-standalone (>= 8.20200309~), patool, p7zip-full, python3 (>= 3.7), python3-annexremote, python3-distro, python3-distutils | libpython3-stdlib (<= 3.6.4~rc1-2), python3-fasteners (>= 0.14~), python3-gitlab, python3-humanize, python3-importlib-metadata | python3 (>> 3.10), python3-iso8601, python3-keyring, python3-keyrings.alt | python3-keyring (<= 8), python3-mock, python3-msgpack, python3-pil, python3-platformdirs, python3-requests (>= 1.2), python3-secretstorage, python3-simplejson, python3-six, python3-tqdm, python3-chardet, python3-packaging, python3:any Recommends: python3-boto, python3-exif, python3-html5lib, python3-httpretty, python3-jsmin, python3-libxmp, python3-lzma, python3-mutagen, python3-pytest, python3-pyperclip, python3-requests-ftp, python3-vcr, python3-whoosh Suggests: python3-duecredit, datalad-container, datalad-crawler, datalad-neuroimaging, python3-bs4, python3-numpy Breaks: datalad-container (<< 1.1.2) Homepage: https://datalad.org Priority: optional Section: python Filename: pool/main/d/datalad/python3-datalad_0.17.5-1~nd+1_all.deb Size: 958872 SHA256: 1f3e16c16863bab40ba92405109ab26c78f19e3e86e2b38733a035221c4e7744 SHA1: 873da190eb5ee83576ff519c2d564e1f841abe5b MD5sum: 7a97a6f55929cc103dd60d7783a9565e Description: data files management and distribution platform DataLad is a data management and distribution platform providing access to a wide range of data resources already available online. Using git-annex as its backend for data logistics it provides following facilities built-in or available through additional extensions . - command line and Python interfaces for manipulation of collections of datasets (install, uninstall, update, publish, save, etc.) and separate files/directories (add, get) - extract, aggregate, and search through various sources of metadata (xmp, EXIF, etc; install datalad-neuroimaging for DICOM, BIDS, NIfTI support) - crawl web sites to automatically prepare and update git-annex repositories with content from online websites, S3, etc (install datalad-crawler) . This package installs the module for Python 3, and Recommends install all dependencies necessary for searching and managing datasets, publishing, and testing. If you need base functionality, install without Recommends. Package: python3-dateutil Version: 2.0+dfsg1-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 153 Depends: neurodebian-popularity-contest, python3 (>= 3.1.3-13~), tzdata Homepage: http://labix.org/python-dateutil Priority: optional Section: python Filename: pool/main/p/python3-dateutil/python3-dateutil_2.0+dfsg1-1~nd12.04+1_all.deb Size: 49686 SHA256: 44eb8a99c2b13b8bd30809e636ea82734f3632c0e30dfe46e767aba4aaac530c SHA1: d7b1ee6c7d91825d3ae29daf32b386a697764c0d MD5sum: 62681c6efef26912ccad3d3e1c74dc26 Description: powerful extensions to the standard datetime module in Python 3 The dateutil package extends the standard datetime module with: . * computing of relative deltas (next month, next year, next Monday, last week of month, etc); * computing of relative deltas between two given date and/or datetime objects * computing of dates based on very flexible recurrence rules, using a superset of the iCalendar specification. Parsing of RFC strings is supported as well. * generic parsing of dates in almost any string format * timezone (tzinfo) implementations for tzfile(5) format files (/etc/localtime, /usr/share/zoneinfo, etc), TZ environment string (in all known formats), iCalendar format files, given ranges (with help from relative deltas), local machine timezone, fixed offset timezone, UTC timezone * computing of Easter Sunday dates for any given year, using Western, Orthodox or Julian algorithms Package: python3-joblib Source: joblib Version: 0.8.4-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 252 Depends: neurodebian-popularity-contest, python3 (>= 3.1.3-13~) Recommends: python3-numpy, python3-nose, python3-simplejson Homepage: http://packages.python.org/joblib/ Priority: optional Section: python Filename: pool/main/j/joblib/python3-joblib_0.8.4-1~nd12.04+1_all.deb Size: 71662 SHA256: b7c81b73a08b47a806478a13c476a234bbb2fcdc062a203d38f3413c3ed6b24e SHA1: 37f724f117dc60f07216279ce7cbf5f2c0ce8ad5 MD5sum: 2047bbbbb746eed622b8f2e43b7df509 Description: tools to provide lightweight pipelining in Python Joblib is a set of tools to provide lightweight pipelining in Python. In particular, joblib offers: . - transparent disk-caching of the output values and lazy re-evaluation (memoize pattern) - easy simple parallel computing - logging and tracing of the execution . Joblib is optimized to be fast and robust in particular on large, long-running functions and has specific optimizations for numpy arrays. . This package contains the Python 3 version. Package: python3-mdp Source: mdp Version: 3.3+git19-g4ec2f29-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1481 Depends: neurodebian-popularity-contest, python3 (>= 3.1.3-13~), python3-numpy Homepage: http://mdp-toolkit.sourceforge.net/ Priority: optional Section: python Filename: pool/main/m/mdp/python3-mdp_3.3+git19-g4ec2f29-1~nd12.04+1_all.deb Size: 489650 SHA256: 923b3e55d324c002f9c36d22881248893f3fd3426d4b20600bc77febad2a8327 SHA1: 4e2571f87e998c04186fc2ae4f76b27492ec9dd0 MD5sum: c7caa180649bd3b4d2553ee3ff7d457c Description: Modular toolkit for Data Processing Python data processing framework for building complex data processing software by combining widely used machine learning algorithms into pipelines and networks. Implemented algorithms include: Principal Component Analysis (PCA), Independent Component Analysis (ICA), Slow Feature Analysis (SFA), Independent Slow Feature Analysis (ISFA), Growing Neural Gas (GNG), Factor Analysis, Fisher Discriminant Analysis (FDA), and Gaussian Classifiers. . This package contains MDP for Python 3. Package: python3-nibabel Source: nibabel Version: 2.0.2-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 63272 Depends: neurodebian-popularity-contest, python3-numpy, python3-scipy Suggests: python-nibabel-doc, python3-dicom, python3-fuse Homepage: http://nipy.sourceforge.net/nibabel Priority: extra Section: python Filename: pool/main/n/nibabel/python3-nibabel_2.0.2-1~nd12.04+1_all.deb Size: 2363716 SHA256: 7f18d0e273f827c1291c2b803400a9348f333d33092308e76385743d0a6756de SHA1: f3644e5d71dbe4166b14d18ee01fe8e6211eab54 MD5sum: 0cd8bff0c7147247e7505f4ee865f944 Description: Python3 bindings to various neuroimaging data formats NiBabel provides read and write access to some common medical and neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI, NIfTI1, MINC, as well as PAR/REC. The various image format classes give full or selective access to header (meta) information and access to the image data is made available via NumPy arrays. NiBabel is the successor of PyNIfTI. Package: python3-pandas Source: pandas Version: 0.14.1-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 8918 Depends: neurodebian-popularity-contest, python3 (>= 3.2), python3-dateutil, python3-tz, python3-numpy (>= 1:1.6~), python3-pandas-lib (>= 0.14.1-1~nd12.04+1) Recommends: python3-scipy, python3-matplotlib, python3-numexpr, python3-tables, python3-bs4, python3-html5lib, python3-six Suggests: python-pandas-doc Homepage: http://pandas.sourceforge.net Priority: optional Section: python Filename: pool/main/p/pandas/python3-pandas_0.14.1-1~nd12.04+1_all.deb Size: 1660926 SHA256: 43c7adbbeebd20a8b95b53406c47607488b360bfc5284fcbee5eb283a7df1b2e SHA1: 8971773aed47822c151d47d290c8ede3aad1b504 MD5sum: b10bb4f37fb491dce6456e620986d628 Description: data structures for "relational" or "labeled" data - Python 3 pandas is a Python package providing fast, flexible, and expressive data structures designed to make working with "relational" or "labeled" data both easy and intuitive. It aims to be the fundamental high-level building block for doing practical, real world data analysis in Python. pandas is well suited for many different kinds of data: . - Tabular data with heterogeneously-typed columns, as in an SQL table or Excel spreadsheet - Ordered and unordered (not necessarily fixed-frequency) time series data. - Arbitrary matrix data (homogeneously typed or heterogeneous) with row and column labels - Any other form of observational / statistical data sets. The data actually need not be labeled at all to be placed into a pandas data structure . This package contains the Python 3 version. Package: python3-patsy Source: patsy Version: 0.4.1+git34-ga5b54c2-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 794 Depends: neurodebian-popularity-contest, python3 (>= 3.2), python3-six, python3-numpy Recommends: python3-pandas Suggests: python-patsy-doc Homepage: http://github.com/pydata/patsy Priority: optional Section: python Filename: pool/main/p/patsy/python3-patsy_0.4.1+git34-ga5b54c2-1~nd12.04+1_all.deb Size: 225302 SHA256: 07bca06ce122c7b60f938920598445642ddc31c75556bd885a7df3c8c0ee7a51 SHA1: f26fc9769b0cd97448d1e44e01bc2b1b0a3027ff MD5sum: 1370ce0294fa4b713b6b2deb6f3c54ca Description: statistical models in Python using symbolic formulas patsy is a Python library for describing statistical models (especially linear models, or models that have a linear component) and building design matrices. . This package contains the Python 3 version. Package: python3-tz Source: python-tz Version: 2012c-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 107 Depends: neurodebian-popularity-contest, tzdata, python3 (>= 3.1.3-13~) Homepage: http://pypi.python.org/pypi/pytz/ Priority: optional Section: python Filename: pool/main/p/python-tz/python3-tz_2012c-1~nd12.04+1_all.deb Size: 31110 SHA256: 27f424360b0610de71d2281248500e85f830a8e931e4c4eeb3d8d218513f0b23 SHA1: bf1c3ee7248c84b5f1dbd09a2a789bc0c243d1ca MD5sum: 81bd1a01652926741eea5c70cd2072a4 Description: Python3 version of the Olson timezone database python-tz brings the Olson tz database into Python. This library allows accurate and cross platform timezone calculations using Python 2.3 or higher. It also solves the issue of ambiguous times at the end of daylight savings, which you can read more about in the Python Library Reference (datetime.tzinfo). . This package contains the Python 3 version of the library. Package: spm8-common Source: spm8 Version: 8.5236~dfsg.1-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 18626 Depends: neurodebian-popularity-contest Recommends: spm8-data, spm8-doc Priority: extra Section: science Filename: pool/main/s/spm8/spm8-common_8.5236~dfsg.1-1~nd12.04+1_all.deb Size: 10747760 SHA256: f2995cdaf4676933a4158d79a1eada6dc9321714c2f14fbdbdf0d246fd07381f SHA1: 31c5b4cbfba815812413a92d50e30610bd5b3033 MD5sum: 372feeb5e1535ecfd97b0f48839093d3 Description: analysis of brain imaging data sequences Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provides the platform-independent M-files. Package: spm8-data Source: spm8 Version: 8.5236~dfsg.1-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 73046 Depends: neurodebian-popularity-contest Priority: extra Section: science Filename: pool/main/s/spm8/spm8-data_8.5236~dfsg.1-1~nd12.04+1_all.deb Size: 52176876 SHA256: d3a5268ccf35f741f9cf59605f78345ac61ecb07bb8c01bfb316ceafe81269fe SHA1: 7a6973208307ff01cf0717ebbda5df2c82abf005 MD5sum: f21ec46fddd30a2ae0fe355ee4c01bba Description: data files for SPM8 Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provide the data files shipped with the SPM distribution, such as various stereotaxic brain space templates and EEG channel setups. Package: spm8-doc Source: spm8 Version: 8.5236~dfsg.1-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 9401 Depends: neurodebian-popularity-contest Priority: extra Section: doc Filename: pool/main/s/spm8/spm8-doc_8.5236~dfsg.1-1~nd12.04+1_all.deb Size: 8648994 SHA256: 322ebbb54b520746a660d41d6b88cd85033741a0f6d1322c1e9f17b868e371fd SHA1: b12832b37ef5c2dc669ec210c2fda133a813f40d MD5sum: 3bdf0a02f35291934fb90f7e12e436fb Description: manual for SPM8 Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provides the SPM manual in PDF format. Package: spyder Version: 2.2.5+dfsg-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 94 Depends: neurodebian-popularity-contest, python, python-spyderlib (= 2.2.5+dfsg-1~nd12.04+1) Homepage: http://code.google.com/p/spyderlib/ Priority: extra Section: devel Filename: pool/main/s/spyder/spyder_2.2.5+dfsg-1~nd12.04+1_all.deb Size: 36068 SHA256: 3bf5018b0177c67ad74ad791b95cb787ef3ed052b608cd4dd176e908cf951dc5 SHA1: 5faddd5a42d85fa9de64c24d4b5230ee12fcc3f2 MD5sum: 0192bd8664bd56faef008e9af8168d84 Description: python IDE for scientists Spyder (previously known as Pydee) is a free open-source Python development environment providing MATLAB-like features in a simple and light-weighted software Package: spykeviewer Version: 0.4.4-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2011 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-guidata, python-guiqwt (>= 2.1.4), python-spyderlib, python-spykeutils (>= 0.4.0), python-neo (>= 0.2.1), python-matplotlib, python-scipy, python-nose, python-sphinx, python-tables Recommends: libjs-jquery, libjs-underscore, ipython-qtconsole (>= 0.12) Homepage: http://www.ni.tu-berlin.de/software/spykeviewer Priority: extra Section: python Filename: pool/main/s/spykeviewer/spykeviewer_0.4.4-1~nd12.04+1_all.deb Size: 1344262 SHA256: ec48531181ec977ae6599044300569d8555192a7c4a456c735435c38ba19d346 SHA1: 09106c6c3cd4a3576ee62822c00022fbf31727fc MD5sum: 1521e85a3e45d1cb2e71ff312b3c7077 Description: graphical utility for analyzing electrophysiological data Spyke Viewer is a multi-platform GUI application for navigating, analyzing and visualizing electrophysiological datasets. Based on the Neo framework, it works with a wide variety of data formats. Spyke Viewer includes an integrated Python console and a plugin system for custom analyses and plots. Package: stabilitycalc Version: 0.1-1~nd11.04+1+nd11.10+1+nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 119 Depends: neurodebian-popularity-contest, python, python-support (>= 0.90.0), python-numpy, python-matplotlib, python-scipy, python-nifti Recommends: python-dicom Homepage: https://github.com/bbfrederick/stabilitycalc Priority: extra Section: science Filename: pool/main/s/stabilitycalc/stabilitycalc_0.1-1~nd11.04+1+nd11.10+1+nd12.04+1_all.deb Size: 28730 SHA256: add473af6d9eb0497a244d721862483deeb0fd562cabf84305eefa9e9c522897 SHA1: f6952357804556ee3b33d3242d205b4aa3cc49c7 MD5sum: 472471b057239fd1029854d1f42c735e Description: evaluate fMRI scanner stability Command-line tools to calculate numerous fMRI scanner stability metrics, based on the FBIRN quality assurance test protocal. Any 4D volumetric timeseries image in NIfTI format is support input. Output is a rich HTML report. Python-Version: 2.7 Package: testkraut Version: 0.0.1-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 358 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0), python-numpy, libjs-underscore, libjs-jquery, python-argparse Recommends: strace, python-scipy, python-colorama, python-apt Homepage: https://github.com/neurodebian/testkraut Priority: extra Section: python Filename: pool/main/t/testkraut/testkraut_0.0.1-1~nd12.04+1_all.deb Size: 99594 SHA256: 67cab9b7c779f963fb4cdd501878d78e45f462601868990f829fe9bfdc7fd325 SHA1: 8d6344c0c06c876467678560b03d0e185c6c97e5 MD5sum: 74b55de26e189ab9a6b7c97f1d733816 Description: test and evaluate heterogeneous data processing pipelines This is a framework for software testing. That being said, testkraut tries to minimize the overlap with the scopes of unit testing, regression testing, and continuous integration testing. Instead, it aims to complement these kinds of testing, and is able to re-use them, or can be integrated with them. . In a nutshell testkraut helps to facilitate statistical analysis of test results. In particular, it focuses on two main scenarios: . * Comparing results of a single (test) implementation across different or changing computational environments (think: different operating systems, different hardware, or the same machine before an after a software upgrade). * Comparing results of different (test) implementations generating similar output from identical input (think: performance of various signal detection algorithms). . While such things can be done using other available tools as well, testkraut aims to provide a lightweight, yet comprehensive description of a test run. Such a description allows for decoupling test result generation and analysis – opening up the opportunity to “crowd-source” software testing efforts, and aggregate results beyond the scope of a single project, lab, company, or site. Python-Version: 2.7 Package: vowpal-wabbit-doc Source: vowpal-wabbit Version: 7.3-1~nd12.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 70918 Depends: neurodebian-popularity-contest Recommends: vowpal-wabbit Homepage: http://hunch.net/~vw/ Priority: optional Section: doc Filename: pool/main/v/vowpal-wabbit/vowpal-wabbit-doc_7.3-1~nd12.04+1_all.deb Size: 50202392 SHA256: 8fe71c3ad76acac1d58d7b100005c3fd7533ec52a969d22b7ee311a3a59d8b9c SHA1: 19d0a8afda5d7cc5c002aa69041fb0f4ced976d1 MD5sum: f944be3d128553cc5761e11c385af764 Description: fast and scalable online machine learning algorithm - documentation Vowpal Wabbit is a fast online machine learning algorithm. The core algorithm is specialist gradient descent (GD) on a loss function (several are available). VW features: - flexible input data specification - speedy learning - scalability (bounded memory footprint, suitable for distributed computation) - feature pairing . This package contains examples (tests) for vowpal-wabbit. Package: youtube-dl Version: 2021.12.17-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 5937 Depends: neurodebian-popularity-contest, python3-pkg-resources, python3:any Recommends: aria2 | wget | curl, ca-certificates, ffmpeg, mpv | mplayer, python3-pyxattr, rtmpdump, python3-pycryptodome Suggests: libfribidi-bin | bidiv, phantomjs Homepage: https://ytdl-org.github.io/youtube-dl/ Priority: optional Section: web Filename: pool/main/y/youtube-dl/youtube-dl_2021.12.17-1~nd110+1_all.deb Size: 1128692 SHA256: 75859d2f34a475fc0f199cd6d2b73e18c29cda44406530964890dcb790008eca SHA1: 09f85f2abc32eb5e9c2ccd6bfd1354ea332b6489 MD5sum: 6d04814be91bd9f85a7d3793ff2a2fb3 Description: downloader of videos from YouTube and other sites youtube-dl is a small command-line program to download videos from YouTube.com and other sites that don't provide direct links to the videos served. . youtube-dl allows the user, among other things, to choose a specific video quality to download (if available) or let the program automatically determine the best (or worst) quality video to grab. It supports downloading entire playlists and all videos from a given user. . Currently supported sites (or features of sites) are: . 1tv, 20min, 220.ro, 23video, 24video, 3qsdn, 3sat, 4tube, 56.com, 5min, 6play, 7plus, 8tracks, 91porn, 9c9media, 9gag, 9now.com.au, abc.net.au, abc.net.au:iview, abcnews, abcnews:video, abcotvs, abcotvs:clips, AcademicEarth:Course, acast, acast:channel, ADN, AdobeConnect, adobetv, adobetv:channel, adobetv:embed, adobetv:show, adobetv:video, AdultSwim, aenetworks, aenetworks:collection, aenetworks:show, afreecatv, AirMozilla, AliExpressLive, AlJazeera, Allocine, AlphaPorno, Amara, AMCNetworks, AmericasTestKitchen, AmericasTestKitchenSeason, anderetijden, AnimeOnDemand, Anvato, aol.com, APA, Aparat, AppleConnect, AppleDaily, ApplePodcasts, appletrailers, appletrailers:section, archive.org, ArcPublishing, ARD, ARD:mediathek, ARDBetaMediathek, Arkena, arte.sky.it, ArteTV, ArteTVEmbed, ArteTVPlaylist, AsianCrush, AsianCrushPlaylist, AtresPlayer, ATTTechChannel, ATVAt, AudiMedia, AudioBoom, audiomack, audiomack:album, AWAAN, awaan:live, awaan:season, awaan:video, AZMedien, BaiduVideo, Bandcamp, Bandcamp:album, Bandcamp:weekly, bangumi.bilibili.com, bbc, bbc.co.uk, bbc.co.uk:article, bbc.co.uk:iplayer:playlist, bbc.co.uk:playlist, BBVTV, Beatport, Beeg, BehindKink, Bellator, BellMedia, Bet, bfi:player, bfmtv, bfmtv:article, bfmtv:live, BibelTV, Bigflix, Bild, BiliBili, BilibiliAudio, BilibiliAudioAlbum, BiliBiliPlayer, BioBioChileTV, Biography, BIQLE, BitChute, BitChuteChannel, BleacherReport, BleacherReportCMS, blinkx, Bloomberg, BokeCC, BongaCams, BostonGlobe, Box, Bpb, BR, BravoTV, Break, brightcove:legacy, brightcove:new, BRMediathek, bt:article, bt:vestlendingen, BusinessInsider, BuzzFeed, BYUtv, Camdemy, CamdemyFolder, CamModels, CamTube, CamWithHer, canalc2.tv, Canalplus, Canvas, CanvasEen, CarambaTV, CarambaTVPage, CartoonNetwork, cbc.ca, cbc.ca:olympics, cbc.ca:player, cbc.ca:watch, cbc.ca:watch:video, CBS, CBSInteractive, CBSLocal, CBSLocalArticle, cbsnews, cbsnews:embed, cbsnews:livevideo, CBSSports, CCMA, CCTV, CDA, CeskaTelevize, CeskaTelevizePorady, channel9, CharlieRose, Chaturbate, Chilloutzone, chirbit, chirbit:profile, cielotv.it, Cinchcast, Cinemax, CiscoLiveSearch, CiscoLiveSession, CJSW, cliphunter, Clippit, ClipRs, Clipsyndicate, CloserToTruth, CloudflareStream, Cloudy, Clubic, Clyp, cmt.com, CNBC, CNBCVideo, CNN, CNNArticle, CNNBlogs, ComedyCentral, ComedyCentralTV, CommonMistakes, CondeNast, CONtv, Corus, Coub, Cracked, Crackle, CrooksAndLiars, crunchyroll, crunchyroll:playlist, CSpan, CtsNews, CTV, CTVNews, cu.ntv.co.jp, Culturebox, CultureUnplugged, curiositystream, curiositystream:collection, CWTV, DailyMail, dailymotion, dailymotion:playlist, dailymotion:user, daum.net, daum.net:clip, daum.net:playlist, daum.net:user, DBTV, DctpTv, DeezerPlaylist, defense.gouv.fr, democracynow, DHM, Digg, DigitallySpeaking, Digiteka, Discovery, DiscoveryGo, DiscoveryGoPlaylist, DiscoveryNetworksDe, DiscoveryVR, Disney, dlive:stream, dlive:vod, Dotsub, DouyuShow, DouyuTV, DPlay, DRBonanza, Dropbox, DrTuber, drtv, drtv:live, DTube, Dumpert, dvtv, dw, dw:article, EaglePlatform, EbaumsWorld, EchoMsk, egghead:course, egghead:lesson, ehftv, eHow, EinsUndEinsTV, Einthusan, eitb.tv, EllenTube, EllenTubePlaylist, EllenTubeVideo, ElPais, Embedly, EMPFlix, Engadget, Eporner, EroProfile, Escapist, ESPN, ESPNArticle, EsriVideo, Europa, EWETV, ExpoTV, Expressen, ExtremeTube, EyedoTV, facebook, FacebookPluginsVideo, faz.net, fc2, fc2:embed, Fczenit, filmon, filmon:channel, Filmweb, FiveThirtyEight, FiveTV, Flickr, Folketinget, FootyRoom, Formula1, FOX, FOX9, FOX9News, Foxgay, foxnews, foxnews:article, FoxSports, france2.fr:generation-what, FranceCulture, FranceInter, FranceTV, FranceTVEmbed, francetvinfo.fr, FranceTVJeunesse, FranceTVSite, Freesound, freespeech.org, FreshLive, FrontendMasters, FrontendMastersCourse, FrontendMastersLesson, FujiTVFODPlus7, Funimation, Funk, Fusion, Fux, Gaia, GameInformer, GameSpot, GameStar, Gaskrank, Gazeta, GDCVault, generic, Gfycat, 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