Package: afni-common Source: afni Version: 18.0.05+git24-gb25b21054~dfsg.1-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 17627 Depends: neurodebian-popularity-contest, python, tcsh Recommends: python-mdp, python-nibabel, afni-atlases Homepage: http://afni.nimh.nih.gov Priority: extra Section: contrib/science Filename: pool/contrib/a/afni/afni-common_18.0.05+git24-gb25b21054~dfsg.1-1~nd+1_all.deb Size: 11204408 SHA256: 28ffc52a53d9a9d5d7c7c71778fa61ff447ffe260abd6970a48168b88bd0f7f8 SHA1: 8fe06fdf15a40e3be310c853fd49b835d8f0f9e8 MD5sum: 7932a37d39d9a2f931e00fb4f7d95239 Description: miscellaneous scripts and data files for AFNI AFNI is an environment for processing and displaying functional MRI data. It provides a complete analysis toolchain, including 3D cortical surface models, and mapping of volumetric data (SUMA). . This package provides the required architecture independent parts of AFNI. Package: fsl-5.0-complete Source: fslmeta Version: 5.0.7-3~ndall0 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 12 Depends: fsl-5.0-core (>= 5.0.7-3~ndall0~), fsl-atlases (>= 5.0~), fsl-possum-data (>= 5.0~), fsl-first-data (>= 5.0~) Recommends: fsl-5.0-wiki (>= 5.0.7-3~ndall0~), fsl-5.0-gpu (>= 5.0.7-3~ndall0~), fslview Suggests: fsleyes Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: contrib/science Filename: pool/contrib/f/fslmeta/fsl-5.0-complete_5.0.7-3~ndall0_all.deb Size: 4014 SHA256: d524bfba85f003dc1b013013927062869d310468a1723cce2f889cd999d0ce34 SHA1: daed795276f955a9c9b179fe1b43d845b47bb799 MD5sum: 22798de378c13c9de7b0f817fa5ac257 Description: metapackage for the entire FSL suite (tools and data) FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . Installing this meta package yields a complete FSL 5.0 installation, including all tools and data packages. Package: fsl-complete Source: fslmeta Version: 5.0.7-3~ndall0 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 12 Depends: fsl-5.0-complete, fsl-core Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: contrib/science Filename: pool/contrib/f/fslmeta/fsl-complete_5.0.7-3~ndall0_all.deb Size: 3954 SHA256: 3fc0882881b73b4868405876f3b31addd423672ccc5214e897e19c39c2978e39 SHA1: 21dcda16b2d7bccfc1898d55835f08715b747796 MD5sum: c4d1c94875389ab6b43c0d9e0189cd0a Description: metapackage for the entire FSL suite (tools and data) FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . Installing this meta package yields a complete installation of the latest FSL version, including all tools and data packages. Package: jist Version: 2.0.20100907.dfsg1-1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 40092 Depends: mipav, openjdk-6-jre | java6-runtime, libcommons-cli-java (>= 1.2), libdrmaa-java, libjgraph-java (>= 5.10.1.2), libxom-java (>= 1.2.1), libxpp3-java (>= 1.1.4c), libxstream-java (>= 1.3.1) Homepage: http://www.nitrc.org/projects/jist/ Priority: extra Section: contrib/science Filename: pool/contrib/j/jist/jist_2.0.20100907.dfsg1-1_all.deb Size: 9020652 SHA256: b4059b70c695e9caba46e8ea1cca6482819c740b2d91b56a569a11f6c7fc60ba SHA1: 1f898a03ea355a710e23cc79ff3b5d4c63295852 MD5sum: 800acee273ebe4a3bd78c49d32188556 Description: Java Image Science Toolkit Java Image Science Toolkit (JIST) provides a native Java-based imaging processing environment similar to the ITK/VTK paradigm. Initially developed as an extension to MIPAV (CIT, NIH, Bethesda, MD), the JIST processing infrastructure provides automated GUI generation for application plug-ins, graphical layout tools, and command line interfaces. Package: matlab-eeglab11 Source: eeglab11 Version: 11.0.0.0~b~dfsg.1-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 40738 Depends: neurodebian-popularity-contest, matlab-support Recommends: eeglab11-sampledata Priority: extra Section: contrib/science Filename: pool/contrib/e/eeglab11/matlab-eeglab11_11.0.0.0~b~dfsg.1-1~nd+1_all.deb Size: 14149348 SHA256: 455350d6a826a5abb2170ea489a354f94b384bb75512369be6c57b1329b35aea SHA1: 32131ade56b38f857b2dfa85860c626897ffc5b6 MD5sum: 2e9241791578ded3f4f447121c871aff Description: electrophysiological data analysis This is sofwware for processing continuous or event-related EEG or other physiological data. It is designed for use by both novice and expert users. In normal use, the EEGLAB graphic interface calls graphic functions via pop-up function windows. The EEGLAB history mechanism can save the resulting calls to disk for later incorporation into scripts. . This package provides EEGLAB to be used with Matlab. Note that this package depends on Matlab -- a commercial software that needs to be obtained and installed separately. Package: matlab-gdf Source: libgdf Version: 0.1.3-3~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 150 Depends: neurodebian-popularity-contest, libgdf-dev (>= 0.1.3-3~nd+1), matlab-support Homepage: https://github.com/mbillingr/libgdf Priority: optional Section: contrib/science Filename: pool/contrib/libg/libgdf/matlab-gdf_0.1.3-3~nd+1_all.deb Size: 22244 SHA256: a141a7e5aea7456fe737846d4379f5f0487a0d8adeca85ccaeb5c337c254b8ba SHA1: 520afdc71b2a2b3dbe93eea7eefe969e179e1409 MD5sum: 19d7964045fa272cc769699f184ea858 Description: IO library for the GDF -- Matlab interface GDF (General Dataformat for Biosignals) is intended to provide a generic storage for biosignals, such as EEG, ECG, MEG etc. . This package builds Matlab bindings for GDF at installation time. Note that this package depends on Matlab -- a commercial software that needs to be obtain and installed separately. Package: matlab-spm8 Source: spm8 Version: 8.5236~dfsg.1-1~nd+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 1251 Depends: neurodebian-popularity-contest, matlab-support, spm8-common (= 8.5236~dfsg.1-1~nd+1), make Provides: spm, spm8 Priority: extra Section: contrib/science Filename: pool/contrib/s/spm8/matlab-spm8_8.5236~dfsg.1-1~nd+1_all.deb Size: 237186 SHA256: f7dcd17bab4fc1885928bb0a40fbc09290e735b16d62f16b8ac78d01fce46d33 SHA1: f3d36f6ff78470980f15c566b180deb1e2b5ae9b MD5sum: 257e7ac8aa00035425ea9ea8bd3fc06a Description: analysis of brain imaging data sequences for Matlab Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provides SPM to be used with Matlab. Note that this package depends on Matlab -- a commercial software that needs to be obtained and installed separately. Package: matlab-support Version: 0.0.21~nd+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 96 Depends: neurodebian-popularity-contest, debconf (>= 1.3.22) | cdebconf (>= 0.43), debconf (>= 0.5) | debconf-2.0, sudo Recommends: libstdc++6-4.4-dev | libstdc++-dev Suggests: lsb-core Conflicts: matlab (<= 0.0.14~) Replaces: matlab (<= 0.0.14~) Priority: optional Section: contrib/devel Filename: pool/contrib/m/matlab-support/matlab-support_0.0.21~nd+1_all.deb Size: 31560 SHA256: 7fb2178146cf6a993aabe666e9b538e364817e07453e4d8d02fa0839a1e4c5ef SHA1: 7de0b54bbec7312223a0d59e582ff21c9e4b3e81 MD5sum: 3a6b0a7aa0bc3f22b19b1f6f7fbd07a0 Description: distro integration for local MATLAB installations This package does not provide MATLAB. Instead, it configures an existing MATLAB installation to integrate more comfortably in a Debian installation. . Currently it provides /usr/bin/matlab through the alternatives system, offers to work around incompatibilities between the libraries bundled with MATLAB and system libraries, and provides a helper utility meant to be used by other packages to compile MEX extensions. . Install this if you would like your MATLAB installation to behave more like an ordinary Debian package. Other packages may depend on this one if they install MATLAB code, for example in order to compile MEX extensions.