Package: bats Version: 1.8.0-3~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 158 Depends: neurodebian-popularity-contest Recommends: parallel Homepage: https://github.com/bats-core/bats-core Priority: optional Section: devel Filename: pool/main/b/bats/bats_1.8.0-3~nd+1_all.deb Size: 47928 SHA256: 912478ffa284242f4fac37029497d19bf053fc9a3569b0cb15367fca7da62490 SHA1: 2216425c07103441e564d01bc07b4d48d2c6a049 MD5sum: f2ffc002a87324c160b4222e8aacbf51 Description: bash automated testing system Bats is a TAP-compliant testing framework for Bash. It provides a simple way to verify that the UNIX programs you write behave as expected. Bats is most useful when testing software written in Bash, but you can use it to test any UNIX program. Package: bats-assert Version: 2.1.0-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 57 Depends: neurodebian-popularity-contest, bats-support Enhances: bats Multi-Arch: foreign Homepage: https://github.com/bats-core/bats-assert Priority: optional Section: devel Filename: pool/main/b/bats-assert/bats-assert_2.1.0-1~nd+1_all.deb Size: 8964 SHA256: 2af6f15943ff82f0b75fa0be3aaa128b00042f55c4cbb8f9b1c94dc172a3df02 SHA1: b2833933577f4d984b8a39f3968b9cfdb9647b53 MD5sum: 44bdf53c12b4dfee53237ebcba4c9f09 Description: Helper library providing common assertions for Bats bats-assert provides various ready-made assertions that can be used to make Bats tests simpler to understand and to debug. . For example: . * assert_success: exit status is 0. * assert_output: output contains given content. * assert_line: a specific line of output contains given content. Package: bats-file Version: 0.3.0+git20230131-gbba751f-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 49 Depends: neurodebian-popularity-contest, bats-support Enhances: bats Multi-Arch: foreign Homepage: https://github.com/bats-core/bats-file Priority: optional Section: devel Filename: pool/main/b/bats-file/bats-file_0.3.0+git20230131-gbba751f-1~nd+1_all.deb Size: 7160 SHA256: d512a93320a5f357abac156cd7bd9b325e879a065e907b94fc290d497f79525f SHA1: a7f0cfa866454788ae3c8222f9f3d98134a8963e MD5sum: a2948d86c91eb6fec698bdfe29d5082c Description: Helper library providing filesystem-related assertions for Bats bats-file provides various assertions and helpers to simplify writing Bats tests that deal with files and filesystems. . For example: . * assert_file_contains: Check if the file content matches a regex. * assert_file_owner: Check if a specific user owns the file. * assert_symlink_to: Check if the file is a symlink to the target. * temp_make: Create a temp directory for the current test in BATS_TMPDIR. Package: bats-support Version: 0.3.0-2~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 26 Depends: neurodebian-popularity-contest Multi-Arch: foreign Homepage: https://github.com/bats-core/bats-support Priority: optional Section: libdevel Filename: pool/main/b/bats-support/bats-support_0.3.0-2~nd+1_all.deb Size: 5928 SHA256: 61a556dbf27c0d1b539ff83745448a982d011eeb4efbb4d246d10fbf822dcedf SHA1: 032c9089eb90d78f0ea0e0c77795ae3dad41925a MD5sum: a989fba872b8db2d7b70698fe6942b7b Description: Supporting library to test bats helper libraries bats-support is a supporting library providing common functions to test helper libraries written for Bats. . Features: . * error reporting * output formatting * language tools Package: btrbk Version: 0.32.5-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 405 Depends: neurodebian-popularity-contest, perl, btrfs-progs Recommends: openssh-client, mbuffer Suggests: openssl, python3 Homepage: https://digint.ch/btrbk/ Priority: optional Section: utils Filename: pool/main/b/btrbk/btrbk_0.32.5-1~nd+1_all.deb Size: 115928 SHA256: 00a59eaf51b7b3a787cb81f200e39df7ec848eaff6248a0b2744b775dcc23f13 SHA1: 197a11a7bb42259099b0e54d1ea132f5e40a35a3 MD5sum: 3eabb5708a1586113daeba64895a70e0 Description: backup tool for btrfs subvolumes Backup tool for btrfs subvolumes, using a configuration file, allows creation of backups from multiple sources to multiple destinations, with ssh and flexible retention policy support (hourly, daily, weekly, monthly). Package: con-duct Version: 0.8.0-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 81 Depends: neurodebian-popularity-contest, procps, python3:any Recommends: python3-matplotlib Homepage: https://github.com/con/duct/ Priority: optional Section: python Filename: pool/main/c/con-duct/con-duct_0.8.0-1~nd+1_all.deb Size: 20604 SHA256: 152815b422b54e855b137c3d6efd66fed66299588f8c699e83d57d3f4d709d62 SHA1: cd154c5c96226f280aa3121815b2aad9b460cbd2 MD5sum: 1453a9ad24155fe2708a9ac245899095 Description: lightweight wrapper to collect execution data for a command con-duct provides a duct command which is a lightweight wrapper that collects execution data for an arbitrary command. Execution data includes execution time, system information, and resource usage statistics of the command and all its child processes. It is intended to simplify the problem of recording the resources necessary to execute a command, particularly in an HPC environment. . Resource usage is determined by polling (at a sample-interval). During execution, duct produces a JSON lines file with one data point recorded for each report (at a report-interval). . This package installs the Python library and command-line tools. Package: datalad Version: 1.1.4-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 231 Depends: neurodebian-popularity-contest, python3-datalad (= 1.1.4-1~nd+1), python3-argcomplete (>= 1.12.3), python3:any Suggests: datalad-container Homepage: https://datalad.org Priority: optional Section: science Filename: pool/main/d/datalad/datalad_1.1.4-1~nd+1_all.deb Size: 192636 SHA256: 38b65dafc77a4fc8aeeefb355018a9ea5e04945251f005b910a8271bc1015c86 SHA1: 3d710e943076f6d22c5e02f496a241d2d10445bd MD5sum: fdb3f852952565133acf08c19b61ee58 Description: data files management and distribution platform DataLad is a data management and distribution platform providing access to a wide range of data resources already available online. Using git-annex as its backend for data logistics it provides following facilities built-in or available through additional extensions . - command line and Python interfaces for manipulation of collections of datasets (install, uninstall, update, publish, save, etc.) and separate files/directories (add, get) Package: datalad-container Version: 1.2.5-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 150 Depends: neurodebian-popularity-contest, datalad (>= 0.18~), python3-requests (>= 1.2), python3-chardet (>= 3.0.4), python3-datalad, python3:any Recommends: singularity-container Suggests: docker.io Homepage: http://datalad-container.rtfd.org Priority: optional Section: science Filename: pool/main/d/datalad-container/datalad-container_1.2.5-1~nd+1_all.deb Size: 35244 SHA256: 27f91806230511ad390056905685d7954eb9ab431b9b7fed089c9dc892d8e273 SHA1: 5bbfec60127ec443c1e9d0d44b50d0e3b59d9cca MD5sum: 53275c5b2dcfecb17d285fd8b334252b Description: DataLad extension for working with containerized environments This extension enhances DataLad (http://datalad.org) for working with computational containers. Package: debhelper Version: 13.11.4~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1413 Depends: neurodebian-popularity-contest, autotools-dev, dh-autoreconf (>= 17~), dh-strip-nondeterminism (>= 0.028~), dpkg (>= 1.18.0~), dpkg-dev (>= 1.18.2~), dwz (>= 0.12.20190711), file (>= 3.23), libdebhelper-perl (= 13.11.4~nd+1), libdpkg-perl (>= 1.17.14), man-db, po-debconf, perl:any Suggests: dh-make Breaks: cmake (<< 3.9~), meson (<< 0.40.0~) Provides: debhelper-compat (= 9), debhelper-compat (= 10), debhelper-compat (= 11), debhelper-compat (= 12), debhelper-compat (= 13), dh-sequence-dwz, dh-sequence-elf-tools, dh-sequence-installinitramfs, dh-sequence-installsysusers, dh-sequence-single-binary, dh-sequence-systemd Multi-Arch: foreign Priority: optional Section: devel Filename: pool/main/d/debhelper/debhelper_13.11.4~nd+1_all.deb Size: 944444 SHA256: 1242599dc7b3d46ae5a67aa553279a98bada7c10027b925169018b7fb2e802fe SHA1: 952fc3da7045a5366d9298eeeb11e12c54c1a6b3 MD5sum: 8c5c3b51ea58ba0055188350d3ad8793 Description: helper programs for debian/rules A collection of programs that can be used in a debian/rules file to automate common tasks related to building Debian packages. Programs are included to install various files into your package, compress files, fix file permissions, integrate your package with the Debian menu system, debconf, doc-base, etc. Most Debian packages use debhelper as part of their build process. Package: dh-python Version: 5.20230130+nd1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 445 Depends: neurodebian-popularity-contest, python3:any, python3-distutils | python3 (<< 3.6.5~rc1-1) Suggests: libdpkg-perl, dpkg-dev, flit, python3-build, python3-tomli, python3-installer Breaks: python3 (<< 3.3.2-4~) Provides: dh-sequence-python3 Multi-Arch: foreign Priority: optional Section: python Filename: pool/main/d/dh-python/dh-python_5.20230130+nd1~nd+1_all.deb Size: 103868 SHA256: fc1fcf2df7420f119a936b52ded803607826778463646f9386018b12ebccc5fd SHA1: dbdd43c6ef1a5fda1b4218b1b5e3dfbeb917a332 MD5sum: 67e6d1516daf41054e11763bec332b26 Description: Debian helper tools for packaging Python libraries and applications This package contains: * pybuild - invokes various build systems for requested Python versions in order to build modules and extensions * dh_python3 - calculates Python 3.X dependencies for Debian packages, adds maintainer scripts to byte compile files, etc. Package: git-annex-remote-rclone Version: 0.8-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 24 Depends: neurodebian-popularity-contest, git-annex | git-annex-standalone, rclone Homepage: https://github.com/DanielDent/git-annex-remote-rclone Priority: optional Section: utils Filename: pool/main/g/git-annex-remote-rclone/git-annex-remote-rclone_0.8-1~nd+1_all.deb Size: 8556 SHA256: c1608a1b6bdb8990ca0bd8ef7b716d4d378c5a2074999a25a72097d635982ed7 SHA1: a7444906ca19e5eb97240de231c5a6b53b07b12f MD5sum: 2e05b60323cd3ae1a9f2b9147795ec16 Description: rclone-based git annex special remote This is a wrapper around rclone to make any destination supported by rclone usable with git-annex. . Cloud storage providers supported by rclone currently include: * Google Drive * Amazon S3 * Openstack Swift / Rackspace cloud files / Memset Memstore * Dropbox * Google Cloud Storage * Microsoft One Drive * Hubic * Backblaze B2 * Yandex Disk . Note: although Amazon Cloud Drive support is implemented, it is broken ATM see https://github.com/DanielDent/git-annex-remote-rclone/issues/22 . Package: heudiconv Version: 0.13.1-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 13543 Depends: neurodebian-popularity-contest, python3-dcmstack, python3-filelock, python3-nibabel, python3-nipype, python3-pydicom, python3:any, dcm2niix, python3, python3-dicom, python3-numpy Recommends: python3-pytest, python3-datalad, python3-etelemetry Homepage: https://github.com/nipy/heudiconv Priority: optional Section: science Filename: pool/main/h/heudiconv/heudiconv_0.13.1-1~nd+1_all.deb Size: 7662624 SHA256: ee6c2327ac8bbfeb6a2ed928e2a184088a69b91d2333e0f572a84166525fd73b SHA1: 6e9bcbd9c43c3d7e6f93dc95066a975fe32a8081 MD5sum: f5820c7f02ef2a2872af35725ad598f9 Description: DICOM converter with support for structure heuristics This is a flexible dicom converter for organizing brain imaging data into structured directory layouts. It allows for flexible directory layouts and naming schemes through customizable heuristics implementations. It only converts the necessary dicoms, not everything in a directory. It tracks the provenance of the conversion from dicom to nifti in w3c prov format. Package: libdebhelper-perl Source: debhelper Version: 13.11.4~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 312 Depends: neurodebian-popularity-contest, perl:any Breaks: debhelper (<< 12.6~) Replaces: debhelper (<< 12.6~) Multi-Arch: foreign Priority: optional Section: perl Filename: pool/main/d/debhelper/libdebhelper-perl_13.11.4~nd+1_all.deb Size: 81372 SHA256: 2caa9e5e05fa152e9da3f2ad83074afde55f04c11af61d95e0c06acdb01380ea SHA1: c9a85364de8369e1ffb55b86a04b1006995323ae MD5sum: 294fd0658dd9c765f25cb80c3f449aa6 Description: debhelper perl modules A collection of programs that can be used in a debian/rules file to automate common tasks related to building Debian packages. . This package provides the perl modules used by the scripts in debhelper. Package: libfreenect-doc Source: libfreenect Version: 1:0.5.3-3~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 931 Depends: neurodebian-popularity-contest Multi-Arch: foreign Homepage: http://openkinect.org/ Priority: extra Section: doc Filename: pool/main/libf/libfreenect/libfreenect-doc_0.5.3-3~nd+1_all.deb Size: 146316 SHA256: 12492e4bcab2b911c04a608016f0dc7e0699311474636b3f3313d09c1cf43f67 SHA1: 866b8f026ac8b7cd00057d2543c71850febfb3c2 MD5sum: 30c51173521a5a9040a2f28fc53b3b06 Description: library for accessing Kinect device -- documentation libfreenect is a cross-platform library that provides the necessary interfaces to activate, initialize, and communicate data with the Kinect hardware. Currently, the library supports access to RGB and depth video streams, motors, accelerometer and LED and provide binding in different languages (C++, Python...) . This library is the low level component of the OpenKinect project which is an open community of people interested in making use of the Xbox Kinect hardware with PCs and other devices. . This package contains the documentation of the API of libfreenect. Package: neurodebian Version: 0.42.1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 94 Depends: python3, wget, neurodebian-archive-keyring, debconf (>= 0.5) | debconf-2.0 Recommends: netselect Suggests: neurodebian-desktop, neurodebian-popularity-contest Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian_0.42.1~nd+1_all.deb Size: 31088 SHA256: eafba4f2eea8c3ae02e56a4a9d3bc2ec7671cdce6224c7910eecc4f058d4e926 SHA1: 12831a28c9ff178407a25a8187ca014b0f036428 MD5sum: 0a153d9b0b272327f295385cd7404b57 Description: neuroscience-oriented distribution - repository configuration The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . This package enables the NeuroDebian repository on top of a standard Debian or Ubuntu system. Package: neurodebian-archive-keyring Source: neurodebian Version: 0.42.1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 20 Depends: gnupg2 | gnupg, dirmngr Breaks: neurodebian-keyring (<< 0.34~) Replaces: neurodebian-keyring (<< 0.34~) Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-archive-keyring_0.42.1~nd+1_all.deb Size: 6736 SHA256: 237ec0d568c9251935421dab7c4b8827f67a10bf15a4ce4c6ba7f10045fe698c SHA1: bbb45b1a52996b1b3fe125061c416aec6ead35ff MD5sum: 338f8587799e74213819de59bd57b50f Description: neuroscience-oriented distribution - GnuPG archive keys The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . The NeuroDebian project digitally signs its Release files. This package contains the archive keys used for that. Package: neurodebian-desktop Source: neurodebian Version: 0.42.1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 195 Depends: ssh-askpass-gnome | ssh-askpass, desktop-base, adwaita-icon-theme | gnome-icon-theme, neurodebian-popularity-contest Recommends: reportbug-ng Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-desktop_0.42.1~nd+1_all.deb Size: 118216 SHA256: d9e4e32d7d9adf8d6cb5019b873e48c6e62c9e163c82af8b9f12fb9191935fae SHA1: 44fc1508521c38781595265b3ce274fbb9aad62f MD5sum: 6d93e07f25fa48220c45e920e944dbd8 Description: neuroscience-oriented distribution - desktop integration The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . This package provides NeuroDebian artwork (icons, background image) and a NeuroDebian menu featuring the most popular neuroscience tools, which will be automatically installed upon initial invocation. Package: neurodebian-dev Source: neurodebian Version: 0.42.1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 109 Depends: devscripts, neurodebian-archive-keyring Recommends: python3, zerofree, moreutils, time, debian-archive-keyring, apt-utils, cowbuilder, neurodebian-freeze Suggests: virtualbox-ose, virtualbox-ose-fuse, singularity-container Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-dev_0.42.1~nd+1_all.deb Size: 30448 SHA256: e0954cafd808dac728371c8df31651459810052b01a38e20ba2d27ae9cfefb36 SHA1: d3fb3c80105fb53d7108a3538f0bee8637d243f6 MD5sum: e5679562f4de58b09b59143c0a331be5 Description: neuroscience-oriented distribution - development tools The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . This package provides sources and development tools used by NeuroDebian to provide backports for a range of Debian/Ubuntu releases. Package: neurodebian-freeze Source: neurodebian Version: 0.42.1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 34 Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-freeze_0.42.1~nd+1_all.deb Size: 11068 SHA256: d7e7bc3696adf4d22136afe80ff09d30b4822bc2fc3f2bcbb2a40ed5fb399928 SHA1: dbed153c58c0b3d99b26b119f56b8922ea2f25a4 MD5sum: 808fcd4e05359273ac732c0c27444e81 Description: nd_freeze tool to freeze APT sources to use snapshots The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . This minimalistic package provides nd_freeze script to be used in rich or minimalistic environments (such as Docker or Singularity recipes) to freeze their APT sources. Intended to assist making such images reproducible. Package: neurodebian-popularity-contest Source: neurodebian Version: 0.42.1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 24 Depends: popularity-contest Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-popularity-contest_0.42.1~nd+1_all.deb Size: 8920 SHA256: af06e7f671470278590fc0c4679a0858bf771dedcf524e242c3e6e460e2098e9 SHA1: 75d8e22b2ea75d689c85274808baaff817f0da6f MD5sum: d82baee4dbbb5a394257b5040c7c4b44 Description: neuroscience-oriented distribution - popcon integration The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . This package is a complement to the generic popularity-contest package to enable anonymous submission of usage statistics to NeuroDebian in addition to the popcon submissions to the underlying distribution (either Debian or Ubuntu) popcon server. . Participating in popcon is important for the following reasons: * Popular packages receive more attention from developers; bugs are fixed faster and updates are provided quicker. * It ensures that support is not dropped for a previous release of Debian or Ubuntu while there are active users. * User statistics may be useful for upstream research software developers seeking funding for continued development. . This requires that popcon is activated for the underlying distribution (Debian or Ubuntu), which can be achieved by running "dpkg-reconfigure popularity-contest" as root. Package: nuitka Version: 1.3.5+ds-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 12040 Depends: neurodebian-popularity-contest, gcc (>= 5.0) | g++ (>= 4.4) | clang (>= 3.0), scons (>= 2.0.0), python3-jinja2, python3-appdirs | base-files (<< 7.2), python3-glob2 | base-files (<< 9.10), python3-dev, base-files (>= 11) | python-jinja2, base-files (>= 11) | python-yaml, base-files (>= 11) | base-files (<< 9.10) | python-glob2, zlib1g-dev, libzstd-dev | base-files (<= 9), ccache, patchelf, python3:any (>= 3.3~) Recommends: python3-lxml, python3-tqdm, strace, libfuse2, gdb | lldb Homepage: https://nuitka.net Priority: optional Section: python Filename: pool/main/n/nuitka/nuitka_1.3.5+ds-1~nd+1_all.deb Size: 1404628 SHA256: ae3f7c7221f7675287f03d29a1f312fcb4a8e1f9bdb64c5fe1ba1a48e96e3aff SHA1: 2efe4b23b47b87d42804002fe9433646daf44965 MD5sum: a4bb99349eb00f3abcfb5a8f36b46516 Description: Python compiler with full language support and CPython compatibility This Python compiler achieves full language compatibility and compiles Python code into compiled objects that are not second class at all. Instead they can be used in the same way as pure Python objects. Package: psychtoolbox-3-common Source: psychtoolbox-3 Version: 3.0.19.14.dfsg1-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 57985 Depends: neurodebian-popularity-contest Recommends: alsa-utils, apriltag, gamemode Suggests: gnuplot Homepage: http://psychtoolbox.org Priority: optional Section: science Filename: pool/main/p/psychtoolbox-3/psychtoolbox-3-common_3.0.19.14.dfsg1-1~nd+1_all.deb Size: 26268880 SHA256: 5e94263a00e961087a5927844f0fb4b54b4b424f15335cd65ad102e74f91733d SHA1: 40aa804e850943d50e7a5942d7dde60cd5234101 MD5sum: bc55573bbfbafb0ad578c23c2126c222 Description: toolbox for vision research -- arch/interpreter independent part Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains architecture independent files (such as .m scripts) Package: pybuild-plugin-autopkgtest Source: dh-python Version: 5.20230130+nd1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 16 Depends: neurodebian-popularity-contest, dh-python (= 5.20230130+nd1~nd+1), debhelper, make Multi-Arch: foreign Priority: optional Section: python Filename: pool/main/d/dh-python/pybuild-plugin-autopkgtest_5.20230130+nd1~nd+1_all.deb Size: 9396 SHA256: 62a9789c464c6835f97231331fff9d4d688bdc22d04e59d11c68fd934d8a23c6 SHA1: 8eecc21b59851b5341222bb40e803493cf521ddd MD5sum: c49196dee2008dcb126e055ea90ab1fd Description: pybuild autopkgtest test runner (metapackage) This package depends on the packages required to run pybuild-autopkgtest, a pybuild-based autopkgtest test runner. pybuild-autopkgtest will run the same test suite that regular pybuild runs during build time, but against the installed packages and without doing a build first. Package: pybuild-plugin-pyproject Source: dh-python Version: 5.20230130+nd1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 16 Depends: neurodebian-popularity-contest, dh-python (= 5.20230130+nd1~nd+1), python3-build (>> 0.7~), python3-installer, python3-tomli Multi-Arch: foreign Priority: optional Section: python Filename: pool/main/d/dh-python/pybuild-plugin-pyproject_5.20230130+nd1~nd+1_all.deb Size: 9352 SHA256: 7c72b804e57fd026f7aea78646b8906876776133636d85f79b8b65fb54eab49b SHA1: ac7f43f412bbc2edd7170dd80c8a39a4aa38bfa9 MD5sum: 22d9a088b2b2d617388018e9c9e6c1dc Description: Debian helper tools for packaging Python libraries using PEP517 This metapackage depends on the components necessary for building packages with the generic PEP517 build plugin. Package: python-nipype-doc Source: nipype Version: 1.9.0-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 13018 Depends: neurodebian-popularity-contest, libjs-jquery, libjs-underscore Suggests: python3-nipype Multi-Arch: foreign Homepage: https://nipype.readthedocs.io/en/latest/ Priority: optional Section: doc Filename: pool/main/n/nipype/python-nipype-doc_1.9.0-1~nd+1_all.deb Size: 1251384 SHA256: 36093c97eb6696dd15ed170b34829f82bd5fff39522881d75fa1e213609d5914 SHA1: d8db2b1265243e579783e84cac7db05789391d9f MD5sum: 70e0ada0b6165c040758c087b0cd1c08 Description: Neuroimaging data analysis pipelines in Python3 -- documentation Nipype interfaces Python to other neuroimaging packages and creates an API for specifying a full analysis pipeline in Python. Currently, it has interfaces for SPM, FSL, AFNI, Freesurfer, but could be extended for other packages (such as lipsia). . This package contains Nipype examples and documentation in various formats. Package: python3-build Source: python-build Version: 0.9.0-1~bpo11+1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 77 Depends: neurodebian-popularity-contest, python3-importlib-metadata | python3 (>> 3.8), python3-packaging, python3-pep517 (>= 0.9), python3-tomli | python3 (>> 3.11), python3:any, python3-toml, python3-wheel Suggests: python3-pip, python3-venv Homepage: https://github.com/pypa/build Priority: optional Section: python Filename: pool/main/p/python-build/python3-build_0.9.0-1~bpo11+1~nd+1_all.deb Size: 20992 SHA256: 9bdd64038f901603cb8e9dfa5accbca7b929a5931849b728347d40c96812d377 SHA1: a04d67819cd5902497e71529c0be0769a2995db0 MD5sum: fb2678c036f768470ea2465055d2d9e6 Description: Simple, correct PEP517 package builder (Python 3) python-build will invoke the PEP 517 hooks to build a distribution package. It is a simple build tool and does not perform any dependency management. . This package installs the library for Python 3. Package: python3-datalad Source: datalad Version: 1.1.4-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4351 Depends: neurodebian-popularity-contest, git-annex (>= 8.20200309~) | git-annex-standalone (>= 8.20200309~), patool, 7zip (>= 23.01+dfsg-4~) | p7zip-full, python3 (>= 3.7), python3-annexremote, python3-boto3, python3-distro, python3-fasteners (>= 0.14~), python3-gitlab, python3-humanize, python3 (>= 3.10) | python3-importlib-metadata (>= 3.6~), python3 (>= 3.9) | python3-importlib-resources (>= 3.0~), python3-iso8601, python3-keyring, python3-keyrings.alt | python3-keyring (<= 8), python3-msgpack, python3-platformdirs, python3-requests (>= 1.2), python3-secretstorage, python3-typing-extensions (>= 3.10.0.2~), python3-tqdm (>= 4.32.0), python3-chardet, python3-packaging, python3:any Recommends: python3-html5lib, python3-httpretty, python3-lzma, python3-pytest (>= 7.0), python3-pyperclip, python3-requests-ftp, python3-vcr Suggests: python3-duecredit, datalad-container, python3-bs4, python3-numpy Breaks: datalad-container (<< 1.1.2) Homepage: https://datalad.org Priority: optional Section: python Filename: pool/main/d/datalad/python3-datalad_1.1.4-1~nd+1_all.deb Size: 890776 SHA256: 16d6b753107bc8dcdeada44e2e70bfc717c29ba1ee5b8ac6a5936cdcf057f125 SHA1: 2b5dd35248a4f8fdb74355dfb327d49196dcab71 MD5sum: 14ecfa9b89751afc42037b56631f6994 Description: data files management and distribution platform DataLad is a data management and distribution platform providing access to a wide range of data resources already available online. Using git-annex as its backend for data logistics it provides following facilities built-in or available through additional extensions . - command line and Python interfaces for manipulation of collections of datasets (install, uninstall, update, publish, save, etc.) and separate files/directories (add, get) . This package installs the module for Python 3, and Recommends install all dependencies necessary for searching and managing datasets, publishing, and testing. If you need base functionality, install without Recommends. Package: python3-dcmstack Source: dcmstack Version: 0.9-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 521 Depends: neurodebian-popularity-contest, python3-dicom, python3-nibabel, python3-numpy, python3-pydicom, python3:any, libjs-sphinxdoc (>= 4.3) Conflicts: python-dcmstack Homepage: https://github.com/moloney/dcmstack Priority: optional Section: science Filename: pool/main/d/dcmstack/python3-dcmstack_0.9-1~nd+1_all.deb Size: 75948 SHA256: f161ee4459c05c3392b7c01f3bb387e117be33280c169618df7c6aa06532726d SHA1: d21af3e01c838c645513e5d82de10276024468a1 MD5sum: b1e3bc7ac63f40fe54008cd5cb22f86b Description: DICOM to NIfTI conversion - python3 package DICOM to NIfTI conversion with the added ability to extract and summarize meta data from the source DICOMs. The meta data can be injected into a NIfTI header extension or written out as a JSON formatted text file. . This package provides the Python3 package. Package: python3-fscacher Source: fscacher Version: 0.4.1-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 61 Depends: neurodebian-popularity-contest, python3-joblib, python3-platformdirs, python3:any Homepage: https://github.com/con/fscacher Priority: optional Section: python Filename: pool/main/f/fscacher/python3-fscacher_0.4.1-1~nd+1_all.deb Size: 13608 SHA256: fcbac36e1695206c0f765cb6423a6aeb2f914f7ded1f7ec3665f57e899d05279 SHA1: 62fd06c876e28894d2b47ab7a7e18abdfd466cab MD5sum: 9a642b5062a02d7db0bb14ed75b63530 Description: caching results of operations on heavy file trees fscacher is a Python module which provides a cache and decorator for memoizing functions whose outputs depend upon the contents of a file argument. . If you have a function 'foo()' that takes a file path as its first argument, and if the behavior of 'foo()' is pure in the *contents* of the path and the values of its other arguments, 'fscacher' can help cache that function. It caches the outputs of 'foo()' will be cached for each set of input arguments and for a "fingerprint" (timestamps and size) of each 'path'. If 'foo()' is called twice with the same set of arguments, the result from the first call will be reused for the second, unless the file pointed to by 'path' changes, in which case the function will be run again. Package: python3-importlib-metadata Source: python-importlib-metadata Version: 4.6.4-1~nd3~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 74 Depends: neurodebian-popularity-contest, python3-typing-extensions | python3 (>> 3.8), python3-zipp (>= 0.5), python3:any Homepage: https://github.com/python/importlib_metadata Priority: optional Section: python Filename: pool/main/p/python-importlib-metadata/python3-importlib-metadata_4.6.4-1~nd3~nd+1_all.deb Size: 22844 SHA256: 7545d568d29bed123c985cac2d8e516f2f2633d5d32c53bc91dd36904000fc5f SHA1: 783155732f6f17913afeb251426517bb262c3c36 MD5sum: 7ca83403a2b5d771b0630c79729000ff Description: library to access the metadata for a Python package - Python 3.x Provides an API for accessing an installed package’s metadata, such as its entry points or its top-level name. This functionality intends to replace most uses of pkg_resources entry point API and metadata API. . This package contains Python 3.x module. Package: python3-importlib-resources Source: importlib-resources Version: 5.1.0-1.1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 100 Depends: neurodebian-popularity-contest, python3-zipp, python3:any Homepage: https://github.com/python/importlib_resources Priority: optional Section: python Filename: pool/main/i/importlib-resources/python3-importlib-resources_5.1.0-1.1~nd+1_all.deb Size: 18428 SHA256: 12ca180ca31e9b3eb2d73fafd81294e637bafb305a8376e65ce21ddd3d231ebe SHA1: defa239aeb05e042cb87d811a6c32c14f6f0d847 MD5sum: 3b0d33085478991f53297419b4d29ec8 Description: Read resources from Python packages importlib_resources is a backport of Python standard library importlib.resources module for older Pythons. Users of Python 3.9 and beyond should use the standard library module, since for these versions, importlib_resources just delegates to that module. . The key goal of this module is to replace parts of pkg_resources with a solution in Python's stdlib that relies on well-defined APIs. This makes reading resources included in packages easier, with more stable and consistent semantics. . This library provides two very simple decorators that document the publicness of the names in your module. They keep your module's __all__ in sync so you don't have to. Package: python3-installer Source: python-installer Version: 0.4.0+dfsg1-2~bpo11+1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 69 Depends: neurodebian-popularity-contest, python3-importlib-resources | python3 (>> 3.7), python3:any Suggests: python-installer-doc Homepage: https://github.com/pradyunsg/installer/ Priority: optional Section: python Filename: pool/main/p/python-installer/python3-installer_0.4.0+dfsg1-2~bpo11+1~nd+1_all.deb Size: 16136 SHA256: c22068007ff61c61819cb3f4d5693ef1fd264d708fa0b4fd199463dd3bb3c20d SHA1: 9e32bcf4613ba6a574b101f9543c0e807e8b1d11 MD5sum: a5cf8c9bd537f42f668cd034a8d28a11 Description: Python library for unpacking and installing wheels "installer" is a low-level library for installing a Python package from a wheel distribution; the wheel is the basic unit of Python module distribution to end users. It provides basic functionality and abstractions for handling wheels and installing packages from wheels, including: . * Logic for "unpacking" a wheel (i.e. installation). * Abstractions for various parts of the unpacking process. * Extensible simple implementations of the abstractions. * Platform-independent Python script wrapper generation. Package: python3-libxmp Source: python-xmp-toolkit Version: 2.0.1+git20170629.5692bdf-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 146 Depends: neurodebian-popularity-contest, python3-tz, python3:any Suggests: python-libxmp-doc Homepage: https://python-xmp-toolkit.readthedocs.org/ Priority: optional Section: python Filename: pool/main/p/python-xmp-toolkit/python3-libxmp_2.0.1+git20170629.5692bdf-1~nd+1_all.deb Size: 23592 SHA256: 91d62159de239973196870ffaccc76065e2cfc853fb1a2d8abe6c92f0c56a549 SHA1: 76fb71eee41d9a072aeab7b21775aef97925bae5 MD5sum: 488b518d9f93f0052af431b24a396666 Description: Python3 library for XMP metadata Python XMP Toolkit is a library for working with XMP metadata, as well as reading/writing XMP metadata stored in many different file formats. . XMP (Extensible Metadata Platform) facilitates embedding metadata in files using a subset of RDF. Most notably XMP supports embedding metadata in PDF and many image formats, though it is designed to support nearly any file type. . This package provides Python3 bindings. Package: python3-libxmp-doc Source: python-xmp-toolkit Version: 2.0.1+git20170629.5692bdf-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 272 Depends: neurodebian-popularity-contest, libjs-sphinxdoc (>= 5.2) Recommends: python3-libxmp Homepage: https://python-xmp-toolkit.readthedocs.org/ Priority: optional Section: doc Filename: pool/main/p/python-xmp-toolkit/python3-libxmp-doc_2.0.1+git20170629.5692bdf-1~nd+1_all.deb Size: 44044 SHA256: aec35eb4da4359fec813391177a801ff24d0150109755d366cca5c524bf45dc6 SHA1: c66ea5dc7ee3b17605a21cd8d03435683bb169f7 MD5sum: f7e9c50f6629d6fd3370c4ea6b0172d5 Description: Python library for XMP metadata - documentation Python XMP Toolkit is a library for working with XMP metadata, as well as reading/writing XMP metadata stored in many different file formats. . XMP (Extensible Metadata Platform) facilitates embedding metadata in files using a subset of RDF. Most notably XMP supports embedding metadata in PDF and many image formats, though it is designed to support nearly any file type. . This package contains the documentation. Package: python3-mesonpy Source: meson-python Version: 0.17.1-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 948 Depends: neurodebian-popularity-contest, libjs-sphinxdoc (>= 7.4), meson (>= 1.2.3), ninja-build, python3 (>= 3.11), python3-packaging, python3-pyproject-metadata (>= 0.7.1), python3-tomli | python3-supported-min (>= 3.11), python3:any Recommends: patchelf Homepage: https://github.com/mesonbuild/meson-python Priority: optional Section: python Filename: pool/main/m/meson-python/python3-mesonpy_0.17.1-1~nd+1_all.deb Size: 108368 SHA256: fd81ad0996dd3003244eb25870dc2ef4f1a0a544dd329940aabb31991bb64094 SHA1: 7ba61dcace2c0a636726734bf3da5bf6f8f9b6ef MD5sum: b0012487ad858241d883d35087d66f30 Description: Meson PEP 517 Python build backend This package enables Python package authors to use Meson as the build backend for their packages. . Meson is a build system designed to increase programmer productivity. It does this by providing a fast, simple and easy to use interface for modern software development tools and practices. Package: python3-nipype Source: nipype Version: 1.9.0-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 10891 Depends: neurodebian-popularity-contest, python3-click, python3-dateutil, python3-etelemetry, python3-filelock, python3-looseversion, python3-networkx, python3-nibabel, python3-numpy, python3-packaging, python3-prov, python3-puremagic, python3-rdflib, python3-scipy, python3-simplejson, python3-traits, python3:any, python3-dipy, python3-psutil Recommends: ipython3, python3-pytest, graphviz, python3-xvfbwrapper, mayavi2, python3-pydotplus, python3-pydot, python3-cfflib Suggests: afni, python3-nipy, slicer, matlab-spm8, python3-pyxnat, mne-python, elastix, ants, python3-pytest-xdist, python3-bids Homepage: https://nipype.readthedocs.io/en/latest/ Priority: optional Section: python Filename: pool/main/n/nipype/python3-nipype_1.9.0-1~nd+1_all.deb Size: 1862088 SHA256: 34f893a4e11fc088d26c18d5f1efe4207a613ff7d1342ce5dbb404c10e82ab7c SHA1: fd8f97ed9b433930148e269fb99bce09343aa461 MD5sum: 11e658f062817b5f95bce47e8481dfbe Description: Neuroimaging data analysis pipelines in Python3 Nipype interfaces Python to other neuroimaging packages and creates an API for specifying a full analysis pipeline in Python. Currently, it has interfaces for SPM, FSL, AFNI, Freesurfer, but could be extended for other packages (such as lipsia). Package: python3-tomli Source: python-tomli Version: 1.2.2-2~bpo11+1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 57 Depends: neurodebian-popularity-contest, python3:any Homepage: https://github.com/hukkin/tomli Priority: optional Section: python Filename: pool/main/p/python-tomli/python3-tomli_1.2.2-2~bpo11+1~nd+1_all.deb Size: 14260 SHA256: ce4b4de0ef57ac30ee9fb0f2d4c161396e51cf9ba8ebe455a706f45f59208def SHA1: 83e5fa8a93e127286918add456fbd0ba4abf9797 MD5sum: b39fc9623f2030d5c3cc3d654f16294b Description: lil' TOML parser for Python Tomli is a Python library for parsing TOML. https://toml.io/ Tomli is fully compatible with TOML v1.0.0. https://toml.io/en/v1.0.0 Package: s3cmd Version: 2.3.0-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 524 Depends: neurodebian-popularity-contest, python3-dateutil, python3-magic, python3:any Homepage: https://s3tools.org/s3cmd Priority: optional Section: utils Filename: pool/main/s/s3cmd/s3cmd_2.3.0-1~nd+1_all.deb Size: 120812 SHA256: f0360bd17cbae0b10e6e0184a71a4371976d38fbca780008f59ce2b5cdcd9f09 SHA1: 13bcba8834e8b2a899c1a92ddb326a69406a51cc MD5sum: a16ea45400a74856f843e3ba12830063 Description: command-line Amazon S3 client Command-line tool to upload, retrieve and manage data in Amazon S3 service (http://www.amazon.com/s3/), designed for use in scripts. Features: - creating and destroying S3 buckets - uploading and downloading files - listing remote files - removing remote files - synchronizing local directories to S3 buckets - getting various information about buckets and disk usage . s3cmd supports both (US and EU) S3 datacentres. Package: yt-dlp Version: 2023.12.30-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 9977 Depends: neurodebian-popularity-contest, python3-brotli, python3-certifi, python3-mutagen, python3-pycryptodome, python3-requests, python3-urllib3, python3-websockets, python3:any, python3-pkg-resources Recommends: aria2 | wget | curl, ca-certificates, ffmpeg Suggests: libfribidi-bin | bidiv, phantomjs Homepage: https://github.com/yt-dlp/yt-dlp Priority: optional Section: web Filename: pool/main/y/yt-dlp/yt-dlp_2023.12.30-1~nd+1_all.deb Size: 1851336 SHA256: 6547f003c96cbfdaa7c211d8e70845232ee7f6e5f0bce91a926c63b72679e82a SHA1: ed54738c298204cdfeb1a10a81b530ed39147d5b MD5sum: 68a52e418a6fc285ea1b81ecd8401361 Description: downloader of videos from YouTube and other sites yt-dlp is a youtube-dl fork based on the now inactive youtube-dlc. The main focus of this project is adding new features and patches while also keeping up to date with the original project. . yt-dlp is a small command-line program to download videos from YouTube.com and other sites that don't provide direct links to the videos served. . yt-dlp allows the user, among other things, to choose a specific video quality to download (if available) or let the program automatically determine the best (or worst) quality video to grab. It supports downloading entire playlists and all videos from a given user. . Currently supported sites (or features of sites) are: . 17live, 1News, 1tv, 20min, 23video, 247sports, 24tv.ua, 3qsdn, 3sat, 4tube, 56.com, 6play, 7plus, 8tracks, 91porn, 9c9media, 9gag, 9now.com.au, abc.net.au, abcnews, abcotvs, AbemaTV, AbemaTVTitle, acast, AcFunBangumi, AcFunVideo, ADN, AdobeConnect, adobetv, AdultSwim, aenetworks, AeonCo, afreecatv, AirTV, AitubeKZVideo, AliExpressLive, AlJazeera, Allocine, Allstar, AllstarProfile, AlphaPorno, Alsace20TV, Alsace20TVEmbed, altcensored, Alura, AluraCourse, Amara, AmazonMiniTV, AmazonReviews, AmazonStore, AMCNetworks, AmericasTestKitchen, AmericasTestKitchenSeason, AmHistoryChannel, AnchorFMEpisode, anderetijden, Angel, AnimalPlanet, Anvato, aol.com, APA, Aparat, AppleConnect, AppleDaily, ApplePodcasts, appletrailers, archive.org, ArcPublishing, ARD, ARDMediathek, ARDMediathekCollection, Arkena, arte.sky.it, ArteTV, ArteTVCategory, ArteTVEmbed, ArteTVPlaylist, AtresPlayer, AtScaleConfEvent, ATVAt, AudiMedia, AudioBoom, audiomack, Audius, AWAAN, axs.tv, AZMedien, BaiduVideo, BanBye, BanByeChannel, bandaichannel, Bandcamp, BannedVideo, bbc, bbc.co.uk, BBVTV, BBVTVLive, BBVTVRecordings, BeatBumpPlaylist, BeatBumpVideo, Beatport, Beeg, BehindKink, Bellator, BellMedia, BerufeTV, Bet, bfmtv, Bigflix, Bigo, Bild, BiliBili, Bilibili category extractor, BilibiliAudio, BilibiliAudioAlbum, BiliBiliBangumi, BiliBiliBangumiMedia, BiliBiliBangumiSeason, BilibiliCheese, BilibiliCheeseSeason, BilibiliCollectionList, BilibiliFavoritesList, BiliBiliPlayer, BilibiliPlaylist, BiliBiliSearch, BilibiliSeriesList, BilibiliSpaceAudio, BilibiliSpaceVideo, BilibiliWatchlater, BiliIntl, BiliLive, BioBioChileTV, Biography, BitChute, BitChuteChannel, BlackboardCollaborate, BleacherReport, BleacherReportCMS, blerp, blogger.com, Bloomberg, BokeCC, BongaCams, BostonGlobe, Box, BoxCastVideo, Bpb, BR, BrainPOP, BrainPOPELL, BrainPOPEsp, BrainPOPFr, BrainPOPIl, BrainPOPJr, BravoTV, BreitBart, Bundesliga, Bundestag, BusinessInsider, BuzzFeed, 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