Package: afni Version: 18.0.05+git24-gb25b21054~dfsg.1-1~nd90+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 49514 Depends: neurodebian-popularity-contest, afni-common (= 18.0.05+git24-gb25b21054~dfsg.1-1~nd90+1), tcsh, gifsicle, libjpeg-progs, freeglut3, libc6 (>= 2.23), libexpat1 (>= 2.0.1), libf2c2, libgl1-mesa-glx | libgl1, libglib2.0-0 (>= 2.12.0), libglu1-mesa | libglu1, libglw1-mesa | libglw1, libgomp1 (>= 4.9), libgsl2, libgts-0.7-5 (>= 0.7.6), libice6 (>= 1:1.0.0), libnetcdf11 (>= 3.6.1), libnifti2, libsm6, libvolpack1 (>= 1.0b3), libx11-6, libxext6, libxm4 (>= 2.3.4), libxmhtml1.1 (>= 1.1.9), libxmu6, libxt6, zlib1g (>= 1:1.1.4) Recommends: nifti-bin, bzip2, ffmpeg, netpbm, qhull-bin, dcm2niix Suggests: r-base, xfonts-base Homepage: http://afni.nimh.nih.gov Priority: extra Section: contrib/science Filename: pool/contrib/a/afni/afni_18.0.05+git24-gb25b21054~dfsg.1-1~nd90+1_amd64.deb Size: 13485748 SHA256: 2277c0039a079d073868691c7ea8a07e0d64142ba72349698ab6a7ee3b479aea SHA1: 0b83f3c8d46fd0f3e7184928d27d12488e291fb1 MD5sum: 47e5414cbac8a18a95f5e3d08b55e11f Description: toolkit for analyzing and visualizing functional MRI data AFNI is an environment for processing and displaying functional MRI data. It provides a complete analysis toolchain, including 3D cortical surface models, and mapping of volumetric data (SUMA). . In addition to its own format, AFNI understands the NIfTI format and is therefore integrates easily with FSL and FreeSurfer. Package: afni-common Source: afni Version: 18.0.05+git24-gb25b21054~dfsg.1-1~nd90+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 17627 Depends: neurodebian-popularity-contest, python, tcsh Recommends: python-mdp, python-nibabel, afni-atlases Homepage: http://afni.nimh.nih.gov Priority: extra Section: contrib/science Filename: pool/contrib/a/afni/afni-common_18.0.05+git24-gb25b21054~dfsg.1-1~nd90+1_all.deb Size: 11208458 SHA256: 63e41373fc0742729939b7b6c0668a540fd3ac48898eab073b1f758afe6b7da5 SHA1: 0814d2a723467945fbb3e871be2b7e973b3baa3a MD5sum: cf468b92d30334a001921f08dfa7862c Description: miscellaneous scripts and data files for AFNI AFNI is an environment for processing and displaying functional MRI data. It provides a complete analysis toolchain, including 3D cortical surface models, and mapping of volumetric data (SUMA). . This package provides the required architecture independent parts of AFNI. Package: afni-dbg Source: afni Version: 18.0.05+git24-gb25b21054~dfsg.1-1~nd90+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 46117 Depends: neurodebian-popularity-contest, afni (= 18.0.05+git24-gb25b21054~dfsg.1-1~nd90+1) Homepage: http://afni.nimh.nih.gov Priority: extra Section: contrib/debug Filename: pool/contrib/a/afni/afni-dbg_18.0.05+git24-gb25b21054~dfsg.1-1~nd90+1_amd64.deb Size: 41752598 SHA256: 4a8712ffbf1c5641207f337773259917eaccb4474bb9884c786ac8ac0647c6ad SHA1: 69c22a03918efa1ab4feae7f765b2e7f95f35b4d MD5sum: 7974a26a72a26b7ef726abcd18850fef Description: debug symbols for AFNI AFNI is an environment for processing and displaying functional MRI data. It provides a complete analysis toolchain, including 3D cortical surface models, and mapping of volumetric data (SUMA). . This package provides debug symbols which could be useful to troubleshoot and report problems with AFNI. 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afni-dev Source: afni Version: 18.0.05+git24-gb25b21054~dfsg.1-1~nd90+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 25106 Depends: neurodebian-popularity-contest Homepage: http://afni.nimh.nih.gov Priority: extra Section: contrib/science Filename: pool/contrib/a/afni/afni-dev_18.0.05+git24-gb25b21054~dfsg.1-1~nd90+1_amd64.deb Size: 4377530 SHA256: c3ab36f426bce54e8b0ac4a511a564c16b3449f9adb6632961f263e8230c873a SHA1: fad20283b16b2dfb836d9e39281543943c327430 MD5sum: 4a7fa9fedb6ab0f57c31a3dbe60422a4 Description: header and static libraries for AFNI plugin development AFNI is an environment for processing and displaying functional MRI data. It provides a complete analysis toolchain, including 3D cortical surface models, and mapping of volumetric data (SUMA). . This package provides the necessary libraries and header files for AFNI plugin development. Package: fsl-5.0-complete Source: fslmeta Version: 5.0.7-3~ndall0 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 12 Depends: fsl-5.0-core (>= 5.0.7-3~ndall0~), fsl-atlases (>= 5.0~), fsl-possum-data (>= 5.0~), fsl-first-data (>= 5.0~) Recommends: fsl-5.0-wiki (>= 5.0.7-3~ndall0~), fsl-5.0-gpu (>= 5.0.7-3~ndall0~), fslview Suggests: fsleyes Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: contrib/science Filename: pool/contrib/f/fslmeta/fsl-5.0-complete_5.0.7-3~ndall0_all.deb Size: 4014 SHA256: d524bfba85f003dc1b013013927062869d310468a1723cce2f889cd999d0ce34 SHA1: daed795276f955a9c9b179fe1b43d845b47bb799 MD5sum: 22798de378c13c9de7b0f817fa5ac257 Description: metapackage for the entire FSL suite (tools and data) FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . Installing this meta package yields a complete FSL 5.0 installation, including all tools and data packages. Package: fsl-complete Source: fslmeta Version: 5.0.7-3~ndall0 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 12 Depends: fsl-5.0-complete, fsl-core Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: contrib/science Filename: pool/contrib/f/fslmeta/fsl-complete_5.0.7-3~ndall0_all.deb Size: 3954 SHA256: 3fc0882881b73b4868405876f3b31addd423672ccc5214e897e19c39c2978e39 SHA1: 21dcda16b2d7bccfc1898d55835f08715b747796 MD5sum: c4d1c94875389ab6b43c0d9e0189cd0a Description: metapackage for the entire FSL suite (tools and data) FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . Installing this meta package yields a complete installation of the latest FSL version, including all tools and data packages. Package: matlab-eeglab11 Source: eeglab11 Version: 11.0.0.0~b~dfsg.1-1~nd70+1+nd90+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 41106 Depends: neurodebian-popularity-contest, matlab-support Recommends: eeglab11-sampledata Priority: extra Section: contrib/science Filename: pool/contrib/e/eeglab11/matlab-eeglab11_11.0.0.0~b~dfsg.1-1~nd70+1+nd90+1_all.deb Size: 11105442 SHA256: 4b5ff75aa8a8031a1c3620a76b1b65f5fcc191e391d7c1fcfa2a00777b499286 SHA1: 7d46b5cebf5856dad15c211d4d8fe0e7321ede4d MD5sum: 4fc90095537294e997f60ee4a3375a4c Description: electrophysiological data analysis This is sofwware for processing continuous or event-related EEG or other physiological data. It is designed for use by both novice and expert users. In normal use, the EEGLAB graphic interface calls graphic functions via pop-up function windows. The EEGLAB history mechanism can save the resulting calls to disk for later incorporation into scripts. . This package provides EEGLAB to be used with Matlab. Note that this package depends on Matlab -- a commercial software that needs to be obtained and installed separately. Package: matlab-gdf Source: libgdf Version: 0.1.2-2~nd70+1+nd90+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 152 Depends: neurodebian-popularity-contest, libgdf-dev (>= 0.1.2-2~nd70+1+nd90+1), matlab-support Homepage: http://sourceforge.net/projects/libgdf Priority: extra Section: contrib/science Filename: pool/contrib/libg/libgdf/matlab-gdf_0.1.2-2~nd70+1+nd90+1_all.deb Size: 20944 SHA256: 81c4e4f08cb3571c7d12438b3ddc143928edecf9b2867b5a456094d681235582 SHA1: 9ee0e5663dd8005c6c86970408549a0a2cb9a526 MD5sum: 2652e3e243642c63e19a6d17294ed397 Description: IO library for the GDF -- Matlab interface GDF (General Dataformat for Biosignals) is intended to provide a generic storage for biosignals, such as EEG, ECG, MEG etc. . This package builds Matlab bindings for GDF at installation time. Note that this package depends on Matlab -- a commercial software that needs to be obtain and installed separately. Package: matlab-spm8 Source: spm8 Version: 8.5236~dfsg.1-1~nd70+1+nd90+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 1218 Depends: neurodebian-popularity-contest, matlab-support, spm8-common (= 8.5236~dfsg.1-1~nd70+1+nd90+1), make Provides: spm, spm8 Priority: extra Section: contrib/science Filename: pool/contrib/s/spm8/matlab-spm8_8.5236~dfsg.1-1~nd70+1+nd90+1_all.deb Size: 172118 SHA256: 8a605c9f34037d307878116ac083f4f295e10bcd2e2a0eb9284317ce884465a0 SHA1: 204d82386db8612bd1f3794905263a91b5b78da1 MD5sum: 58a768c2fb97d17ba3a69da1a8844ae7 Description: analysis of brain imaging data sequences for Matlab Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provides SPM to be used with Matlab. Note that this package depends on Matlab -- a commercial software that needs to be obtained and installed separately. Package: matlab-support Version: 0.0.21~nd90+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 96 Depends: neurodebian-popularity-contest, debconf (>= 1.3.22) | cdebconf (>= 0.43), debconf (>= 0.5) | debconf-2.0, sudo Recommends: libstdc++6-4.4-dev | libstdc++-dev Suggests: lsb-core Conflicts: matlab (<= 0.0.14~) Replaces: matlab (<= 0.0.14~) Priority: optional Section: contrib/devel Filename: pool/contrib/m/matlab-support/matlab-support_0.0.21~nd90+1_all.deb Size: 31558 SHA256: d6d59154851394d5d6d5229508aa1880bd9a4f9f63be72d37f0730febb5dfdeb SHA1: 37206649b7a319b0daf69cf55d5320ef49070c84 MD5sum: 42cee6732f78b9afdf6c75b9cfd83767 Description: distro integration for local MATLAB installations This package does not provide MATLAB. Instead, it configures an existing MATLAB installation to integrate more comfortably in a Debian installation. . Currently it provides /usr/bin/matlab through the alternatives system, offers to work around incompatibilities between the libraries bundled with MATLAB and system libraries, and provides a helper utility meant to be used by other packages to compile MEX extensions. . Install this if you would like your MATLAB installation to behave more like an ordinary Debian package. Other packages may depend on this one if they install MATLAB code, for example in order to compile MEX extensions. Package: pycharm-community-sloppy Version: 2019.3.3-1~ndall Architecture: amd64 Maintainer: Yaroslav Halchenko Installed-Size: 716865 Depends: python, openjdk-7-jre | java7-runtime Recommends: ipython Suggests: pep8, flake8, python-nose Provides: pycharm-community Homepage: https://www.jetbrains.com/pycharm Priority: optional Section: contrib/python Filename: pool/contrib/p/pycharm-community-sloppy/pycharm-community-sloppy_2019.3.3-1~ndall_amd64.deb Size: 297890076 SHA256: 1ee0179eec020656ad03e46d88b0ee7eda27b80419dc100c6d9d6ee592d03081 SHA1: 9096a59d29eb05af2f35840286ab2b3c33e4d3d8 MD5sum: 84ffbb693622b5e85621522198689d57 Description: PyCharm IDE (sloppy packaging) PyCharm provides a heavily featured IDE for developing in Python. It features: syntax highlighting, formatter, code navigation and refactoring, built-in debugger, and more. . This package provides a mere container and installer for distributed upstream tarballs. It by no means qualifies as "proper" Debian package and there is no support for it provided by Debian project. Use at your own risk. 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