Package: con-duct Version: 0.8.0-1~nd130+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 81 Depends: neurodebian-popularity-contest, procps, python3:any Recommends: python3-matplotlib Homepage: https://github.com/con/duct/ Priority: optional Section: python Filename: pool/main/c/con-duct/con-duct_0.8.0-1~nd130+1_all.deb Size: 20612 SHA256: adab743015eeb7454fe0d45da1d8218217670ba90923bc8f5adf79d43e594b19 SHA1: 426bbfc45636e26be501d46ad27dd4e153357168 MD5sum: 0bccd3524ed5d7d93faeeb2a3ab6c4ea Description: lightweight wrapper to collect execution data for a command con-duct provides a duct command which is a lightweight wrapper that collects execution data for an arbitrary command. Execution data includes execution time, system information, and resource usage statistics of the command and all its child processes. It is intended to simplify the problem of recording the resources necessary to execute a command, particularly in an HPC environment. . Resource usage is determined by polling (at a sample-interval). During execution, duct produces a JSON lines file with one data point recorded for each report (at a report-interval). . This package installs the Python library and command-line tools. Package: connectome-workbench Version: 2.0.1-1~nd130+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 67227 Depends: neurodebian-popularity-contest, libc6 (>= 2.38), libftgl2 (>= 2.4.0), libgcc-s1 (>= 3.0), libgl1, libglu1-mesa | libglu1, libgomp1 (>= 6), libosmesa6 (>= 10.2~), libqt5core5t64 (>= 5.15.1), libqt5gui5t64 (>= 5.14.1) | libqt5gui5-gles (>= 5.14.1), libqt5network5t64 (>= 5.15.1), libqt5printsupport5t64 (>= 5.0.2), libqt5widgets5t64 (>= 5.14.1), libqt5xml5t64 (>= 5.1.0), libstdc++6 (>= 14), zlib1g (>= 1:1.2.3.4) Recommends: caret Suggests: ffmpeg Homepage: http://www.nitrc.org/projects/workbench/ Priority: optional Section: science Filename: pool/main/c/connectome-workbench/connectome-workbench_2.0.1-1~nd130+1_amd64.deb Size: 28514000 SHA256: 321175c12f3ca4dc2e347e37509ec9debabc0f90000325637b1d684134dde66e SHA1: e5eda1f763894a475a05a320ba41cb7142cbc727 MD5sum: 54e0e6e397944dfdc10e7077653f1673 Description: brain visualization, analysis and discovery tool Connectome Workbench is a brain visualization, analysis and discovery tool for fMRI and dMRI brain imaging data, including functional and structural connectivity data generated by the Human Connectome Project. . Package includes wb_command, a command-line program for performing a variety of analytical tasks for volume, surface, and CIFTI grayordinates data. Package: connectome-workbench-dbg Source: connectome-workbench Version: 2.0.1-1~nd130+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 365972 Depends: neurodebian-popularity-contest, connectome-workbench (= 2.0.1-1~nd130+1) Homepage: http://www.nitrc.org/projects/workbench/ Priority: optional Section: debug Filename: pool/main/c/connectome-workbench/connectome-workbench-dbg_2.0.1-1~nd130+1_amd64.deb Size: 364840220 SHA256: fb625cff9ac8b27ba9727cab8ccaf60814d87bbbbd5a3ea8f8fe01d2b54e1c3d SHA1: abf7bd18955f09100d4691270bf7bd5dcdead6c5 MD5sum: 2f4d49f5249a9ca3922abb182121b271 Description: brain visualization, analysis and discovery tool -- debug symbols Connectome Workbench is a brain visualization, analysis and discovery tool for fMRI and dMRI brain imaging data, including functional and structural connectivity data generated by the Human Connectome Project. . Package includes wb_command, a command-line program for performing a variety of analytical tasks for volume, surface, and CIFTI grayordinates data. . This package contains debug symbols for the binaries. Build-Ids: 5ad079092b8dd8f99344b1cf2d92f654275673cb 7f1c939c9653116a8297a434f57b1cb487f66fb0 Package: datalad Version: 1.1.4-1~nd130+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 231 Depends: neurodebian-popularity-contest, python3-datalad (= 1.1.4-1~nd130+1), python3-argcomplete (>= 1.12.3), python3:any Suggests: datalad-container Homepage: https://datalad.org Priority: optional Section: science Filename: pool/main/d/datalad/datalad_1.1.4-1~nd130+1_all.deb Size: 192648 SHA256: d0ddb4a54b0755fd797819472e63a8847714c6700958f5767c8d78a1a61894cb SHA1: 1a925b241a6f16dc6108b8c871b29c924db09d35 MD5sum: 4f3659e11f886c849d12baf41fb33227 Description: data files management and distribution platform DataLad is a data management and distribution platform providing access to a wide range of data resources already available online. Using git-annex as its backend for data logistics it provides following facilities built-in or available through additional extensions . - command line and Python interfaces for manipulation of collections of datasets (install, uninstall, update, publish, save, etc.) and separate files/directories (add, get) Package: davfs2 Version: 1.7.0-1~nd130+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 367 Depends: neurodebian-popularity-contest, libc6 (>= 2.38), libneon27t64, debconf (>= 0.5) | debconf-2.0, adduser Homepage: https://savannah.nongnu.org/projects/davfs2 Priority: optional Section: utils Filename: pool/main/d/davfs2/davfs2_1.7.0-1~nd130+1_amd64.deb Size: 164156 SHA256: 93d197d5e6a9d449adc2acd34a269da82fc710738261c040aed9398f19b47c2d SHA1: 653c25df3f1ec8e4e5a0c8e61e10931248133ab3 MD5sum: d792fd7bf22e16e015c17f1db223ea29 Description: mount a WebDAV resource as a regular file system Web Distributed Authoring and Versioning (WebDAV), an extension to the HTTP-protocol, allows authoring of resources on a remote web server. davfs2 provides the ability to access such resources like a typical filesystem, allowing for use by standard applications with no built-in support for WebDAV. . davfs2 is designed to fully integrate into the filesystem semantics of Unix-like systems (mount, umount, et c.). davfs2 makes mounting by unprivileged users as easy and secure as possible. . davfs2 does extensive caching to make the file system responsive, to avoid unnecessary network traffic and to prevent data loss, and to cope for slow or unreliable connections. . davfs2 will work with most WebDAV servers needing little or no configuration. Package: davfs2-dbgsym Source: davfs2 Version: 1.7.0-1~nd130+1 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 193 Depends: davfs2 (= 1.7.0-1~nd130+1) Priority: optional Section: debug Filename: pool/main/d/davfs2/davfs2-dbgsym_1.7.0-1~nd130+1_amd64.deb Size: 159812 SHA256: 2cc0d758a8dd23b229f0e7f44b9e50b84ab6ed5a230ec94395ab981cf050a590 SHA1: 33574f45c779dc26f67911bad8973ae4b22feb32 MD5sum: eeddd48a2749e1e410a7bb00b0b31120 Description: debug symbols for davfs2 Build-Ids: a24f7f4adf42401887395d8abd6b4d4cd0ea15fe d6b9125d86fd431e2df13c10b88497bba217f155 Package: diff-pdf Version: 0.5.1-1~nd1~nd130+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 190 Depends: neurodebian-popularity-contest, libc6 (>= 2.34), libcairo2 (>= 1.2.4), libgcc-s1 (>= 3.0), libglib2.0-0 (>= 2.12.0), libpoppler-glib8 (>= 0.18.0), libstdc++6 (>= 5.2), libwxbase3.2-1 (>= 3.2.2+dfsg), libwxgtk3.2-1 (>= 3.2.1+dfsg-2) Multi-Arch: foreign Homepage: https://github.com/vslavik/diff-pdf Priority: optional Section: graphics Filename: pool/main/d/diff-pdf/diff-pdf_0.5.1-1~nd1~nd130+1_amd64.deb Size: 42704 SHA256: 069c159f27c07bf15a3f9095210ff8cff740bb3e73f9145d30646ac7ae153055 SHA1: b811c563423c6ef1a527ea0a10d840a86b02b66d MD5sum: ea44258482d405f362e7ba5ccfdc25f8 Description: a tool for visually comparing two PDFs It takes two PDF files as arguments. By default, its only output is its return code, which is 0 if there are no differences and 1 if the two PDFs differ. It can also produce a PDF file with visually highlighted differences, and has a mode to compare visually in a simple GUI. Package: diff-pdf-dbgsym Source: diff-pdf Version: 0.5.1-1~nd1~nd130+1 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 568 Depends: diff-pdf (= 0.5.1-1~nd1~nd130+1) Priority: optional Section: debug Filename: pool/main/d/diff-pdf/diff-pdf-dbgsym_0.5.1-1~nd1~nd130+1_amd64.deb Size: 518148 SHA256: dc2c26cc72034378341529990db2da83317043fca8108a128cd2b3ebad17afd5 SHA1: b5199356766d75c75167f1c3f23aaee1e172a3ed MD5sum: 35c8f50abb6d1d5fd31ad674ae60feee Description: debug symbols for diff-pdf Build-Ids: b3a2a950e5f10824fee9aa106a66f6733fd6b026 Package: edac-utils Version: 0.18+git16-g8fdc1d4-1~nd130+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 104 Depends: neurodebian-popularity-contest, libc6 (>= 2.34), libedac1, lsb-base (>= 3.0-6) Recommends: dmidecode Homepage: https://github.com/grondo/edac-utils Priority: optional Section: admin Filename: pool/main/e/edac-utils/edac-utils_0.18+git16-g8fdc1d4-1~nd130+1_amd64.deb Size: 26008 SHA256: 30fef86d60f1f2f5576dc2540e6bfc51d56e6556c5a2843d5a7df6f26f170af9 SHA1: 72789b858c2d89c2fc4593c0dc84b8bac1b8c17b MD5sum: ee60a95f417019d70299a6e4931ad0bc Description: report kernel-detected PCI and ECC RAM errors This package contains the user-space utilities for use with the EDAC kernel subsystem. EDAC (Error Detection and Correction) is a set of Linux kernel modules for handling hardware-related errors. Currently its major focus is ECC memory error handling. However it also detects and reports PCI bus parity errors. . PCI parity errors are supported on all architectures (and are a mandatory part of the PCI specification). . Main memory ECC drivers are memory controller specific. At the time of writing, drivers exist for many x86-specific chipsets and CPUs, and some PowerPC, and MIPS systems. . This package provides command lines tools Package: git-annex-standalone Source: git-annex Version: 10.20241031-1~ndall+1 Architecture: amd64 Maintainer: Richard Hartmann Installed-Size: 166312 Depends: git, netbase, openssh-client Recommends: lsof, gnupg, bind9-host, yt-dlp, git-remote-gcrypt (>= 0.20130908-6), nocache, aria2 Suggests: xdot, bup, adb, tor, magic-wormhole, tahoe-lafs, libnss-mdns, uftp Conflicts: git-annex Breaks: datalad (<= 0.12.3~) Provides: git-annex Homepage: http://git-annex.branchable.com/ Priority: optional Section: utils Filename: pool/main/g/git-annex/git-annex-standalone_10.20241031-1~ndall+1_amd64.deb Size: 53000596 SHA256: 8080805f2216a629460f3b65242f5562fd0f1ac34403ca0713bb0a1e132ea172 SHA1: 01eba33bc328a2698a427d7006259343f31b4a5a MD5sum: b572f29657b3bba8053a3ec047ec2ed5 Description: manage files with git, without checking their contents into git -- standalone build git-annex allows managing large files with git, without storing the file contents in git. It can sync, backup, and archive your data, offline and online. Checksums and encryption keep your data safe and secure. Bring the power and distributed nature of git to bear on your large files with git-annex. . It can store large files in many places, from local hard drives, to a large number of cloud storage services, including S3, WebDAV, and rsync, with dozens of cloud storage providers usable via plugins. Files can be stored encrypted with gpg, so that the cloud storage provider cannot see your data. git-annex keeps track of where each file is stored, so it knows how many copies are available, and has many facilities to ensure your data is preserved. . git-annex can also be used to keep a folder in sync between computers, noticing when files are changed, and automatically committing them to git and transferring them to other computers. The git-annex webapp makes it easy to set up and use git-annex this way. . This package provides a standalone bundle build of git-annex, which should be installable on any more or less recent Debian or Ubuntu release. Package: goaccess Version: 1:1.7-1~nd130+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 1136 Depends: neurodebian-popularity-contest, libc6 (>= 2.34), libmaxminddb0 (>= 1.0.2), libncursesw6 (>= 6), libssl3 (>= 3.0.0), libtinfo6 (>= 6) Homepage: https://goaccess.io/ Priority: optional Section: utils Filename: pool/main/g/goaccess/goaccess_1.7-1~nd130+1_amd64.deb Size: 327872 SHA256: ef2a7262334da575a332470f646172a20fa44fdfb083cba78e420d619bdba6f2 SHA1: e29f9704fef0a6a649021e9f732bd6428cfa1094 MD5sum: 540c4c74c63a51dc883b8bf7e5a57568 Description: log analyzer and interactive viewer for the Apache Webserver Displays fast and valuable HTTP statistics for system administrators that require a visual report on the fly. . The collected information will be displayed to the user (sysadmin) in a visual/interactive window. Collected information includes: . -General Statistics, Bandwidth etc. -Top Visitors -Requested files -Requested static files, images, swf, js, etc. -Referrers URLs -404 or Not Found -Operating Systems -Browsers and Spiders -Hosts, Reverse DNS, IP Location -HTTP Status Codes -Referring Sites -Unlimited log file size . GoAccess can parse both of Apaches' log formats, the Common Log Format and the Combined Log Format Package: goaccess-dbgsym Source: goaccess Version: 1:1.7-1~nd130+1 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 501 Depends: goaccess (= 1:1.7-1~nd130+1) Priority: optional Section: debug Filename: pool/main/g/goaccess/goaccess-dbgsym_1.7-1~nd130+1_amd64.deb Size: 467108 SHA256: 4efbafa98559ef5eaf0b9305d32d30d192efd03b985515fe373e425125793454 SHA1: 232a37e0bd8cbaec92efd079fe69c06bb62d1625 MD5sum: dc3e2423a56cdf408a5d0c0100f652f3 Description: debug symbols for goaccess Build-Ids: 6c03d402ed8a5016efdfbdf75b882495c082b06c Package: libedac-dev Source: edac-utils Version: 0.18+git16-g8fdc1d4-1~nd130+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 43 Depends: neurodebian-popularity-contest, libedac1 (= 0.18+git16-g8fdc1d4-1~nd130+1) Homepage: https://github.com/grondo/edac-utils Priority: optional Section: libdevel Filename: pool/main/e/edac-utils/libedac-dev_0.18+git16-g8fdc1d4-1~nd130+1_amd64.deb Size: 14548 SHA256: 6c4194554076629d47baa7b239bf20c4226610c291f9b68c62d08ad7fc07988a SHA1: 703dce779f416a916e755e9f0592fbb9335f9e13 MD5sum: bcf23bf2d14e58bdd74f5eeecbc08360 Description: report kernel-detected PCI and ECC RAM errors This package contains the user-space utilities for use with the EDAC kernel subsystem. EDAC (Error Detection and Correction) is a set of Linux kernel modules for handling hardware-related errors. Currently its major focus is ECC memory error handling. However it also detects and reports PCI bus parity errors. . PCI parity errors are supported on all architectures (and are a mandatory part of the PCI specification). . Main memory ECC drivers are memory controller specific. At the time of writing, drivers exist for many x86-specific chipsets and CPUs, and some PowerPC, and MIPS systems. . This package contains development files for the library Package: libedac1 Source: edac-utils Version: 0.18+git16-g8fdc1d4-1~nd130+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 35 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libsysfs2 (>= 2.1.0) Provides: libedac Homepage: https://github.com/grondo/edac-utils Priority: optional Section: libs Filename: pool/main/e/edac-utils/libedac1_0.18+git16-g8fdc1d4-1~nd130+1_amd64.deb Size: 10464 SHA256: 18ac0c0a4835635556d39c8ca8adc06f784dec8dd8567c9918ab54582cb68407 SHA1: ff6843506e160dd07fa2a6e537fe807153554eb3 MD5sum: 0f7074ce420a6c53e66984fe8675332f Description: report kernel-detected PCI and ECC RAM errors This package contains the user-space utilities for use with the EDAC kernel subsystem. EDAC (Error Detection and Correction) is a set of Linux kernel modules for handling hardware-related errors. Currently its major focus is ECC memory error handling. However it also detects and reports PCI bus parity errors. . PCI parity errors are supported on all architectures (and are a mandatory part of the PCI specification). . Main memory ECC drivers are memory controller specific. At the time of writing, drivers exist for many x86-specific chipsets and CPUs, and some PowerPC, and MIPS systems. . This package includes shared library Package: libedac1-dbg Source: edac-utils Version: 0.18+git16-g8fdc1d4-1~nd130+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 68 Depends: neurodebian-popularity-contest, libedac1 (= 0.18+git16-g8fdc1d4-1~nd130+1) Provides: libedac Homepage: https://github.com/grondo/edac-utils Priority: optional Section: debug Filename: pool/main/e/edac-utils/libedac1-dbg_0.18+git16-g8fdc1d4-1~nd130+1_amd64.deb Size: 35492 SHA256: 70a7af928c27bfb1978ec9b8ac08751913872877da9498dd0ed90b037132ea9d SHA1: 2fa1e543b0b17f395349d3e95090d69b4a461c5e MD5sum: b7e3e67de5a800558b4481979392ef69 Description: report kernel-detected PCI and ECC RAM errors This package contains the user-space utilities for use with the EDAC kernel subsystem. EDAC (Error Detection and Correction) is a set of Linux kernel modules for handling hardware-related errors. Currently its major focus is ECC memory error handling. However it also detects and reports PCI bus parity errors. . PCI parity errors are supported on all architectures (and are a mandatory part of the PCI specification). . Main memory ECC drivers are memory controller specific. At the time of writing, drivers exist for many x86-specific chipsets and CPUs, and some PowerPC, and MIPS systems. . This package includes shared library with debugging symbols not stripped Build-Ids: 01ad7378a93c24ec0591233ecb066e0106f324be f32876178966f13a091e7f602a0be2d7412e5e68 Package: neurodebian Version: 0.42.1~nd130+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 94 Depends: python3, wget, neurodebian-archive-keyring, debconf (>= 0.5) | debconf-2.0 Recommends: netselect Suggests: neurodebian-desktop, neurodebian-popularity-contest Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian_0.42.1~nd130+1_all.deb Size: 31108 SHA256: 2adb0c13c1b0fb1bf1d9c9ba2ee12e7d17ccd7efbb3faed5955d9c7510a186da SHA1: 41466402e0b8a7e9a86c8f96a6d3ec74c423b49f MD5sum: 216dc948dc66c507fcda47644da77d16 Description: neuroscience-oriented distribution - repository configuration The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . This package enables the NeuroDebian repository on top of a standard Debian or Ubuntu system. Package: neurodebian-archive-keyring Source: neurodebian Version: 0.42.1~nd130+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 20 Depends: gnupg2 | gnupg, dirmngr Breaks: neurodebian-keyring (<< 0.34~) Replaces: neurodebian-keyring (<< 0.34~) Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-archive-keyring_0.42.1~nd130+1_all.deb Size: 6736 SHA256: c59d809147036378b8c05c00ed25f5aa2f680e6c4a95bffa6ad0cdd180e9d2a2 SHA1: fa6dcdda0f3907333a68a60cff55cd5010b3bb47 MD5sum: 1a147b99f2fcc4e1e84fba3ea3b1abdd Description: neuroscience-oriented distribution - GnuPG archive keys The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . The NeuroDebian project digitally signs its Release files. This package contains the archive keys used for that. Package: neurodebian-desktop Source: neurodebian Version: 0.42.1~nd130+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 195 Depends: ssh-askpass-gnome | ssh-askpass, desktop-base, adwaita-icon-theme | gnome-icon-theme, neurodebian-popularity-contest Recommends: reportbug-ng Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-desktop_0.42.1~nd130+1_all.deb Size: 118236 SHA256: 4a5e747a9d9aa067e190a456c71b9a3dc7d19b2eac4c05b27c37a99550362e50 SHA1: 0935c2486832690275a24685c955a7b4ff43bb6e MD5sum: ad0d6de67b1cbfebcb548b7c8e267d61 Description: neuroscience-oriented distribution - desktop integration The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . This package provides NeuroDebian artwork (icons, background image) and a NeuroDebian menu featuring the most popular neuroscience tools, which will be automatically installed upon initial invocation. Package: neurodebian-dev Source: neurodebian Version: 0.42.1~nd130+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 109 Depends: devscripts, neurodebian-archive-keyring Recommends: python3, zerofree, moreutils, time, debian-archive-keyring, apt-utils, cowbuilder, neurodebian-freeze Suggests: virtualbox-ose, virtualbox-ose-fuse, singularity-container Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-dev_0.42.1~nd130+1_all.deb Size: 30460 SHA256: 35fd94ab6a76aa5ab34d71226a07a46f7135e9589d5e943828d81d6c86215df7 SHA1: 8a0549e068bfb8db7bd5d58578f921f67fcabe94 MD5sum: bc95704c289298a3b169ee1ed2adf1b8 Description: neuroscience-oriented distribution - development tools The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . This package provides sources and development tools used by NeuroDebian to provide backports for a range of Debian/Ubuntu releases. Package: neurodebian-freeze Source: neurodebian Version: 0.42.1~nd130+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 34 Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-freeze_0.42.1~nd130+1_all.deb Size: 11072 SHA256: 9fc506728106bf34827c1cf88f8006790ad0f53186e517bf83da6ec74363ea13 SHA1: 5c7dc4c2c5ca0514371343a6218b1334cb549fd0 MD5sum: 7f66654c00ee04c6ea913057dfb25731 Description: nd_freeze tool to freeze APT sources to use snapshots The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . This minimalistic package provides nd_freeze script to be used in rich or minimalistic environments (such as Docker or Singularity recipes) to freeze their APT sources. Intended to assist making such images reproducible. Package: neurodebian-popularity-contest Source: neurodebian Version: 0.42.1~nd130+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 24 Depends: popularity-contest Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-popularity-contest_0.42.1~nd130+1_all.deb Size: 8928 SHA256: 603a4e6760ac2e2122ed5bfe695b6ed4af56720f01b5c67916a2c9bb5ed8d8f7 SHA1: 9e34c0fadac9077ba816c8e2564194a08fa7b32f MD5sum: 91d96e11b249fdcc29acd1355f74741a Description: neuroscience-oriented distribution - popcon integration The NeuroDebian project integrates and maintains a variety of software projects within Debian that are useful for neuroscience (such as AFNI, FSL, PsychoPy, etc.) or generic computation (such as HTCondor, pandas, etc.). . This package is a complement to the generic popularity-contest package to enable anonymous submission of usage statistics to NeuroDebian in addition to the popcon submissions to the underlying distribution (either Debian or Ubuntu) popcon server. . Participating in popcon is important for the following reasons: * Popular packages receive more attention from developers; bugs are fixed faster and updates are provided quicker. * It ensures that support is not dropped for a previous release of Debian or Ubuntu while there are active users. * User statistics may be useful for upstream research software developers seeking funding for continued development. . This requires that popcon is activated for the underlying distribution (Debian or Ubuntu), which can be achieved by running "dpkg-reconfigure popularity-contest" as root. Package: octave-psychtoolbox-3 Source: psychtoolbox-3 Version: 3.0.19.14.dfsg1-1~nd130+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 6013 Depends: neurodebian-popularity-contest, octave (>= 9.2.0), libapriltag3t64 (>= 3.1.7), libasound2t64 (>= 1.0.16), libc6 (>= 2.38), libdc1394-25 (>= 2.2.6), libfreenect0.5t64 (>= 1:0.1.1), libgcc-s1 (>= 3.3.1), libgl1, libglib2.0-0t64 (>= 2.12.0), libglu1-mesa | libglu1, libglut3.12 (>= 3.4.0), libgomp1 (>= 4.9), libgstreamer-plugins-base1.0-0 (>= 1.8~), libgstreamer1.0-0 (>= 1.4.0), libopenal1 (>= 1.14), libopenhmd0 (>= 0.3.0), libopenxr-loader1 (>= 1.0.3), libpciaccess0 (>= 0.10.7), libportaudio2 (>= 19+svn20101113), libstdc++6 (>= 11), libusb-1.0-0 (>= 2:1.0.22), libvulkan1 (>= 1.2.131.2), libx11-6 (>= 2:1.2.99.901), libx11-xcb1 (>= 2:1.8.7), libxcb-dri3-0, libxcb-present0, libxcb1 (>= 1.9.2), libxcomposite1 (>= 1:0.4.5), libxext6, libxfixes3 (>= 1:5.0), libxi6 (>= 2:1.2.99.4), libxrandr2 (>= 2:1.4.0), libxxf86vm1, psychtoolbox-3-common (= 3.0.19.14.dfsg1-1~nd130+1), psychtoolbox-3-lib (= 3.0.19.14.dfsg1-1~nd130+1) Recommends: octave-image, octave-optim, octave-signal, octave-statistics, octave-pkg-dev Provides: psychtoolbox, psychtoolbox-3 Homepage: http://psychtoolbox.org Priority: optional Section: science Filename: pool/main/p/psychtoolbox-3/octave-psychtoolbox-3_3.0.19.14.dfsg1-1~nd130+1_amd64.deb Size: 1135692 SHA256: 1b8ce202fb65ce95109c31c97ecf0d46ae4ec9e45812d9bca3b05e70c7576aa0 SHA1: 3b6831cfab745eb64be987d3df89279e12796641 MD5sum: fc50a9d3ff6b900b281ae0ab7ab3d5c0 Description: toolbox for vision research -- Octave bindings Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . See also http://www.psychtoolbox.org/UsingPsychtoolboxOnUbuntu for additional information about systems tune-up and initial configuration. . This package contains bindings for Octave. Package: psychtoolbox-3-common Source: psychtoolbox-3 Version: 3.0.19.14.dfsg1-1~nd130+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 57985 Depends: neurodebian-popularity-contest Recommends: alsa-utils, apriltag, gamemode Suggests: gnuplot Homepage: http://psychtoolbox.org Priority: optional Section: science Filename: pool/main/p/psychtoolbox-3/psychtoolbox-3-common_3.0.19.14.dfsg1-1~nd130+1_all.deb Size: 26273440 SHA256: 3d1fb85d3b06c1fcf8a9d04818e7aa7abcdfdcac32b89e13a845f8a77a25bc9a SHA1: b1a26e16f736519833d4d67214ba9d14fb152182 MD5sum: e18c7695376a5e68fad9a7a1b74731a6 Description: toolbox for vision research -- arch/interpreter independent part Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains architecture independent files (such as .m scripts) Package: psychtoolbox-3-dbg Source: psychtoolbox-3 Version: 3.0.19.14.dfsg1-1~nd130+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 255 Depends: neurodebian-popularity-contest, octave-psychtoolbox-3 (= 3.0.19.14.dfsg1-1~nd130+1) Homepage: http://psychtoolbox.org Priority: optional Section: debug Filename: pool/main/p/psychtoolbox-3/psychtoolbox-3-dbg_3.0.19.14.dfsg1-1~nd130+1_amd64.deb Size: 182748 SHA256: 9d541f6005f30cdc2c2404bc73079a6d7878fb99dc8f4d82c63e890343c444da SHA1: 1d8d20b932fa845b2b8a694fd2c79d372bcfbdcd MD5sum: 271b58052c09d610592d010288153d8a Description: toolbox for vision research -- debug symbols for binaries Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . To ease debugging and troubleshooting this package contains debug symbols for Octave bindings and other binaries. Build-Ids: 95a271fe189241e068bc031ecacb5cde5a93bed8 a4542075036cd8b3271ce1f5f3640cac50d458a5 Package: psychtoolbox-3-lib Source: psychtoolbox-3 Version: 3.0.19.14.dfsg1-1~nd130+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 192 Depends: neurodebian-popularity-contest, libc6 (>= 2.38), libfontconfig1 (>= 2.12.6), libfreetype6 (>= 2.2.1), libgcc-s1 (>= 3.0), libgl1, libglu1-mesa | libglu1, libstdc++6 (>= 13.1) Recommends: gstreamer1.0-plugins-base (>= 1.8~), gstreamer1.0-plugins-good, gstreamer1.0-plugins-bad, gstreamer1.0-plugins-ugly, gstreamer1.0-libav, libopenxr-loader1, libvulkan1 Suggests: libopenxr1-monado Homepage: http://psychtoolbox.org Priority: optional Section: science Filename: pool/main/p/psychtoolbox-3/psychtoolbox-3-lib_3.0.19.14.dfsg1-1~nd130+1_amd64.deb Size: 71092 SHA256: 2ba6f6bee0b91e73cca31129398979cd5e158fe85537de76553ed7628b2df30d SHA1: be738b4d00bac526eee247150019a191af6ac67d MD5sum: a5103cc2a6cd509366a0ac6366093e3b Description: toolbox for vision research -- arch-specific parts Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains additional binaries (tools/dynamic libraries) used by both Octave and Matlab frontends. Package: python-nipy-doc Source: nipy Version: 0.6.1-1~nd130+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 12070 Depends: neurodebian-popularity-contest, libjs-mathjax, libjs-sphinxdoc (>= 7.4) Recommends: python3-nipy Built-Using: sphinx (= 7.4.7-4) Multi-Arch: foreign Homepage: https://nipy.org/nipy/ Priority: optional Section: doc Filename: pool/main/n/nipy/python-nipy-doc_0.6.1-1~nd130+1_all.deb Size: 1975316 SHA256: 9a2ee8cd2a18d4f4b86d9333c5c115a0bf9a27d0a775dd93867ccc642eafcd5c SHA1: 13f95f6fcfd358d47ec5b62c3fa2d325f6f7a49d MD5sum: 7163f7452e336193333df87b7e257ae7 Description: documentation and examples for NiPy This package contains NiPy documentation in various formats (HTML, TXT) including * User manual * Developer guidelines * API documentation Package: python3-datalad Source: datalad Version: 1.1.4-1~nd130+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4351 Depends: neurodebian-popularity-contest, git-annex (>= 8.20200309~) | git-annex-standalone (>= 8.20200309~), patool, 7zip (>= 23.01+dfsg-4~) | p7zip-full, python3 (>= 3.7), python3-annexremote, python3-boto3, python3-distro, python3-fasteners (>= 0.14~), python3-gitlab, python3-humanize, python3 (>= 3.10) | python3-importlib-metadata (>= 3.6~), python3 (>= 3.9) | python3-importlib-resources (>= 3.0~), python3-iso8601, python3-keyring, python3-keyrings.alt | python3-keyring (<= 8), python3-msgpack, python3-platformdirs, python3-requests (>= 1.2), python3-secretstorage, python3-typing-extensions (>= 3.10.0.2~), python3-tqdm (>= 4.32.0), python3-chardet, python3-packaging, python3:any Recommends: python3-html5lib, python3-httpretty, python3-lzma, python3-pytest (>= 7.0), python3-pyperclip, python3-requests-ftp, python3-vcr Suggests: python3-duecredit, datalad-container, python3-bs4, python3-numpy Breaks: datalad-container (<< 1.1.2) Homepage: https://datalad.org Priority: optional Section: python Filename: pool/main/d/datalad/python3-datalad_1.1.4-1~nd130+1_all.deb Size: 890740 SHA256: 5a0819362ee94c3a69d900df60e2886e4ce39b218a6e7b72a210084150b59b79 SHA1: a6fd7e5c00939fc2a3cc2d7a729bc24bb00fabb9 MD5sum: 5d8046a6111b976882c90a1d023b7df7 Description: data files management and distribution platform DataLad is a data management and distribution platform providing access to a wide range of data resources already available online. Using git-annex as its backend for data logistics it provides following facilities built-in or available through additional extensions . - command line and Python interfaces for manipulation of collections of datasets (install, uninstall, update, publish, save, etc.) and separate files/directories (add, get) . This package installs the module for Python 3, and Recommends install all dependencies necessary for searching and managing datasets, publishing, and testing. If you need base functionality, install without Recommends. Package: python3-mesonpy Source: meson-python Version: 0.17.1-1~nd130+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 948 Depends: neurodebian-popularity-contest, libjs-sphinxdoc (>= 7.4), meson (>= 1.2.3), ninja-build, python3 (>= 3.11), python3-packaging, python3-pyproject-metadata (>= 0.7.1), python3-tomli | python3-supported-min (>= 3.11), python3:any Recommends: patchelf Homepage: https://github.com/mesonbuild/meson-python Priority: optional Section: python Filename: pool/main/m/meson-python/python3-mesonpy_0.17.1-1~nd130+1_all.deb Size: 108372 SHA256: 66e71ffc64d983afcfdec2253aba8dad92bb249af8b7aab5fc561106a9db7d35 SHA1: 91b86f0aa860ef6388d57ad4f488cc4660d230ca MD5sum: a99df77750417f3625a5e139feb5f4c0 Description: Meson PEP 517 Python build backend This package enables Python package authors to use Meson as the build backend for their packages. . Meson is a build system designed to increase programmer productivity. It does this by providing a fast, simple and easy to use interface for modern software development tools and practices. Package: python3-nipy Source: nipy Version: 0.6.1-1~nd130+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 3095 Depends: neurodebian-popularity-contest, python3-numpy, python3-nibabel, python3-scipy, python3-sympy, python3-transforms3d, python3:any, python3-nipy-lib (>= 0.6.1-1~nd130+1) Recommends: python3-matplotlib, mayavi2 Suggests: python3-mvpa Homepage: https://nipy.org/nipy/ Priority: optional Section: python Filename: pool/main/n/nipy/python3-nipy_0.6.1-1~nd130+1_all.deb Size: 705116 SHA256: 8f8a6565a36c4febb2af01ea0d5d141e5e1cd2999ae0bc05eec2fe41b1bdc84c SHA1: b6410d2d408f4e518d619194a701ea91124c1251 MD5sum: 64a9272ddb097d03826ff307583d9987 Description: Analysis of structural and functional neuroimaging data NiPy is a Python-based framework for the analysis of structural and functional neuroimaging data. It provides functionality for - General linear model (GLM) statistical analysis - Combined slice time correction and motion correction - General image registration routines with flexible cost functions, optimizers and re-sampling schemes - Image segmentation - Basic visualization of results in 2D and 3D - Basic time series diagnostics - Clustering and activation pattern analysis across subjects - Reproducibility analysis for group studies Package: python3-nipy-lib Source: nipy Version: 0.6.1-1~nd130+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 2988 Depends: neurodebian-popularity-contest, libc6 (>= 2.29), python3-numpy (>= 1:1.25.0), python3-numpy-abi9, python3 (<< 3.13), python3 (>= 3.12~) Multi-Arch: same Homepage: https://nipy.org/nipy/ Priority: optional Section: python Filename: pool/main/n/nipy/python3-nipy-lib_0.6.1-1~nd130+1_amd64.deb Size: 655036 SHA256: 141b9d2c7bfb75c2eef8fda88dff85497d6fc30a5309eaf17826b9a0cce4d167 SHA1: 89276570d2bebec720cc5f0a4ddefe31d45555e0 MD5sum: c5dffb5517758f932dac63913f671bc9 Description: Analysis of structural and functional neuroimaging data (compiled modules) NiPy is a Python-based framework for the analysis of structural and functional neuroimaging data. . This package provides architecture-dependent builds of the libraries. Package: python3-nipy-lib-dbgsym Source: nipy Version: 0.6.1-1~nd130+1 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 3570 Depends: python3-nipy-lib (= 0.6.1-1~nd130+1) Multi-Arch: same Priority: optional Section: debug Filename: pool/main/n/nipy/python3-nipy-lib-dbgsym_0.6.1-1~nd130+1_amd64.deb Size: 3228908 SHA256: adb0c11bfef58ff6549fe334ee73a3d212448f973bdd2d7605e0e3b906cd8ce3 SHA1: 18b0882070d6097336c04dbd54aee8b887468249 MD5sum: adfb0fcc432e819ef1411a4da4b04e29 Description: debug symbols for python3-nipy-lib Build-Ids: 26b275fb77be6b47bafb8a72fc1199ac620e3ed2 26d91c7084083396f2562d1515fab3543e0b669c 3195a23ff9d6f9fa99fe3271ad5a23469fa0e26e 52715012c1c802e6d4252c841b724a0087dd4adc 6b84acbaded1861371fb7a20ef80ede68434d4bc 6d683aedb5c29bbee9df683c12eb36b283627ac2 a488c25996a5e3e748becb0bb54c8a56884b1502 b9bdb7a39b090faabb9d154071c61c6d33542d30 c9b7f1938905161a206d00e718f036b8e2da3592 d047e33ae76f0cfed08a6b875ce8fa737fd7bd59 d68a18555adf5a80f0a634a99266a83870064cd3 d7e77dd86e79365b720b8baac6e524173376bdab eeef1868727bf03a626be26b12b79556c6e79208 f1b76b00890d94a9b878e57c50f1f9a724d19980