Preprint of the forthcoming book chapter ‘Extracellular spikes and current-source density’ featuring the numerical framework biophysics for the calculation of extracellular potentials from transmembrane currents in multi-compartment neuron models, using the line-source method (Holt & Koch, J Comp Neurosci 1999).

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LFPy is a Python package for calculation of extracellular potentials from multicompartment neuron models. It relies on the NEURON simulator and uses the Python interface it provides.

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The 2nd Edition of “Computational Explorations in Cognitive Neuroscience” (O’Reilly & Munakata, 2000) is available as a free wiki textbook.

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Back in 1948, Shannon introduced Information Theory with his landmark paper “A mathematical theory of communication”[1]. Since then, Neuroscience has been treated by researchers as a major field of application of this new theory,  beyond its original scope. A recent special issue of the Journal of Computational Neuroscience on Methods of Information Theory in Neuroscience Research focuses on current methods and applications of Information Theory to neural systems. Read the rest of this entry…

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